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MDH2
HPA
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  • MDH2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

MDH2
Synonyms
Gene descriptioni

Full gene name according to HGNC.

Malate dehydrogenase 2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Citric acid cycle related proteins
Disease related genes
Enzymes
FDA approved drug targets
Human disease related genes
Metabolic proteins
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 7
Cytoband q11.23
Chromosome location (bp) 76048051 - 76067508
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000146701 (version 109)
Entrez gene 4191
HGNC HGNC:6971
UniProt P40926 (UniProt - Evidence at protein level)
neXtProt NX_P40926
GeneCards MDH2
Antibodypedia MDH2 antibodies


PROTEIN FUNCTION
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Oxidoreductase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Tricarboxylic acid cycle
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

NAD
Gene summary (Entrez)i

Useful information about the gene from Entrez

Malate dehydrogenase catalyzes the reversible oxidation of malate to oxaloacetate, utilizing the NAD/NADH cofactor system in the citric acid cycle. The protein encoded by this gene is localized to the mitochondria and may play pivotal roles in the malate-aspartate shuttle that operates in the metabolic coordination between cytosol and mitochondria. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2013]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
MDH2-201
ENSP00000327070
ENST00000315758
P40926
[Direct mapping] Malate dehydrogenase, mitochondrial
Show all
A0A024R4K3
[Target identity:100%; Query identity:100%] Malate dehydrogenase
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Citric acid cycle related proteins
Disease related genes
FDA approved drug targets
   Small molecule drugs
Human disease related genes
   Nervous system diseases
   Epilepsy
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0003824 [catalytic activity]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006094 [gluconeogenesis]
GO:0006099 [tricarboxylic acid cycle]
GO:0006107 [oxaloacetate metabolic process]
GO:0006108 [malate metabolic process]
GO:0006734 [NADH metabolic process]
GO:0009060 [aerobic respiration]
GO:0016020 [membrane]
GO:0016491 [oxidoreductase activity]
GO:0016615 [malate dehydrogenase activity]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0019752 [carboxylic acid metabolic process]
GO:0030060 [L-malate dehydrogenase activity]
GO:0043621 [protein self-association]
GO:0046554 [malate dehydrogenase (NADP+) activity]
GO:0070062 [extracellular exosome]
Show all
338 aa
35.5 kDa
No 0
MDH2-203
ENSP00000408649
ENST00000432020
P40926
[Direct mapping] Malate dehydrogenase, mitochondrial
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
Metabolic proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Citric acid cycle related proteins
Disease related genes
FDA approved drug targets
   Small molecule drugs
Human disease related genes
   Nervous system diseases
   Epilepsy
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0003824 [catalytic activity]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005759 [mitochondrial matrix]
GO:0006094 [gluconeogenesis]
GO:0006099 [tricarboxylic acid cycle]
GO:0006108 [malate metabolic process]
GO:0009060 [aerobic respiration]
GO:0016491 [oxidoreductase activity]
GO:0016615 [malate dehydrogenase activity]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0019752 [carboxylic acid metabolic process]
GO:0030060 [L-malate dehydrogenase activity]
GO:0070062 [extracellular exosome]
Show all
296 aa
30.9 kDa
No 0
MDH2-204
ENSP00000416929
ENST00000443006
G3XAL0
[Direct mapping] Malate dehydrogenase
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Citric acid cycle related proteins
Human disease related genes
   Nervous system diseases
   Epilepsy
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
GO:0005739 [mitochondrion]
GO:0006099 [tricarboxylic acid cycle]
GO:0006108 [malate metabolic process]
GO:0016491 [oxidoreductase activity]
GO:0016615 [malate dehydrogenase activity]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0030060 [L-malate dehydrogenase activity]
Show all
231 aa
24.6 kDa
No 0
MDH2-205
ENSP00000475583
ENST00000461263
U3KQ63
[Direct mapping] Malate dehydrogenase, mitochondrial
Show all
Metabolic proteins
   Phobius predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Citric acid cycle related proteins
Human disease related genes
   Nervous system diseases
   Epilepsy
Protein evidence (Ezkurdia et al 2014)
Show all
28 aa
2.9 kDa
No 0

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