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POMZP3
HPA
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  • POMZP3
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

POMZP3
Synonyms POM-ZP3, POM121
Gene descriptioni

Full gene name according to HGNC.

POM121 and ZP3 fusion
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 7
Cytoband q11.23
Chromosome location (bp) 76609986 - 76627279
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000146707 (version 109)
Entrez gene 22932
HGNC HGNC:9203
UniProt Q6PJE2 (UniProt - Evidence at transcript level)
neXtProt NX_Q6PJE2
GeneCards POMZP3
Antibodypedia POMZP3 antibodies


PROTEIN FUNCTION
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene appears to have resulted from a fusion of DNA sequences derived from 2 distinct loci, specifically through the duplication of two internal exons from the POM121 gene and four 3' exons from the ZP3 gene. The 5' end of this gene is similar to the 5` coding region of the POM121 gene which encodes an integral nuclear pore membrane protein. However, the protein encoded by this gene lacks the nuclear pore localization motif. The 3' end of this gene is similar to the last 4 exons of the zona pellucida glycoprotein 3 (ZP3) gene and the encoded protein retains one zona pellucida domain. Multiple protein isoforms are encoded by transcript variants of this gene. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
POMZP3-201
ENSP00000275569
ENST00000275569
Q6PJE2
[Direct mapping] POM121 and ZP3 fusion protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0003674 [molecular_function]
GO:0005654 [nucleoplasm]
GO:0007339 [binding of sperm to zona pellucida]
GO:0008150 [biological_process]
GO:0031012 [extracellular matrix]
GO:0031965 [nuclear membrane]
GO:0032190 [acrosin binding]
GO:0035803 [egg coat formation]
GO:2000344 [positive regulation of acrosome reaction]
Show all
115 aa
12.7 kDa
No 0
POMZP3-202
ENSP00000309233
ENST00000310842
Q6PJE2
[Direct mapping] POM121 and ZP3 fusion protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0003674 [molecular_function]
GO:0005654 [nucleoplasm]
GO:0007339 [binding of sperm to zona pellucida]
GO:0008150 [biological_process]
GO:0031012 [extracellular matrix]
GO:0031965 [nuclear membrane]
GO:0032190 [acrosin binding]
GO:0035803 [egg coat formation]
GO:2000344 [positive regulation of acrosome reaction]
Show all
187 aa
20.6 kDa
No 0
POMZP3-204
ENSP00000416963
ENST00000441393
H7C4D5
[Direct mapping] Zona pellucida protein C
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0007339 [binding of sperm to zona pellucida]
GO:0035803 [egg coat formation]
GO:0035804 [structural constituent of egg coat]
GO:0035805 [egg coat]
Show all
124 aa
13.7 kDa
No 0
POMZP3-205
ENSP00000405319
ENST00000454397
C9J370
[Direct mapping] POM121 and ZP3 fusion protein
Show all
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0005654 [nucleoplasm]
GO:0031965 [nuclear membrane]
Show all
250 aa
27.6 kDa
No 0

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