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SH3KBP1
HPA
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  • SH3KBP1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SH3KBP1
Synonyms CIN85
Gene descriptioni

Full gene name according to HGNC.

SH3 domain containing kinase binding protein 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome X
Cytoband p22.12
Chromosome location (bp) 19533977 - 19887600
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

21
Ensembl ENSG00000147010 (version 109)
Entrez gene 30011
HGNC HGNC:13867
UniProt Q96B97 (UniProt - Evidence at protein level)
neXtProt NX_Q96B97
GeneCards SH3KBP1
Antibodypedia SH3KBP1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Adapter protein involved in regulating diverse signal transduction pathways. Involved in the regulation of endocytosis and lysosomal degradation of ligand-induced receptor tyrosine kinases, including EGFR and MET/hepatocyte growth factor receptor, through an association with CBL and endophilins. The association with CBL, and thus the receptor internalization, may be inhibited by an interaction with PDCD6IP and/or SPRY2. Involved in regulation of ligand-dependent endocytosis of the IgE receptor. Attenuates phosphatidylinositol 3-kinase activity by interaction with its regulatory subunit (By similarity). May be involved in regulation of cell adhesion; promotes the interaction between TTK2B and PDCD6IP. May be involved in the regulation of cellular stress response via the MAPK pathways through its interaction with MAP3K4. Is involved in modulation of tumor necrosis factor mediated apoptosis. Plays a role in the regulation of cell morphology and cytoskeletal organization. Required in the control of cell shape and migration. Has an essential role in the stimulation of B cell activation 1.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Apoptosis, Endocytosis, Host-virus interaction
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes an adapter protein that contains one or more N-terminal Src homology domains, a proline rich region and a C-terminal coiled-coil domain. The encoded protein facilitates protein-protein interactions and has been implicated in numerous cellular processes including apoptosis, cytoskeletal rearrangement, cell adhesion and in the regulation of clathrin-dependent endocytosis. Alternate splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Jul 2017]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SH3KBP1-202
ENSP00000369020
ENST00000379698
Q96B97
[Direct mapping] SH3 domain-containing kinase-binding protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0006897 [endocytosis]
GO:0006915 [apoptotic process]
GO:0007010 [cytoskeleton organization]
GO:0007015 [actin filament organization]
GO:0007267 [cell-cell signaling]
GO:0008360 [regulation of cell shape]
GO:0016020 [membrane]
GO:0016477 [cell migration]
GO:0017124 [SH3 domain binding]
GO:0030139 [endocytic vesicle]
GO:0030659 [cytoplasmic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0043005 [neuron projection]
GO:0045202 [synapse]
GO:0050871 [positive regulation of B cell activation]
GO:0070161 [anchoring junction]
Show all
628 aa
68.5 kDa
No 0
SH3KBP1-203
ENSP00000369039
ENST00000379716
Q96B97
[Direct mapping] SH3 domain-containing kinase-binding protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005925 [focal adhesion]
GO:0006897 [endocytosis]
GO:0006915 [apoptotic process]
GO:0007010 [cytoskeleton organization]
GO:0007015 [actin filament organization]
GO:0007267 [cell-cell signaling]
GO:0008360 [regulation of cell shape]
GO:0016020 [membrane]
GO:0016477 [cell migration]
GO:0017124 [SH3 domain binding]
GO:0030139 [endocytic vesicle]
GO:0030659 [cytoplasmic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0043005 [neuron projection]
GO:0045202 [synapse]
GO:0050871 [positive regulation of B cell activation]
GO:0070161 [anchoring junction]
Show all
427 aa
46.6 kDa
No 0
SH3KBP1-204
ENSP00000369049
ENST00000379726
Q5JPT2
[Direct mapping] SH3 domain-containing kinase-binding protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005925 [focal adhesion]
GO:0007015 [actin filament organization]
GO:0016020 [membrane]
Show all
709 aa
77.9 kDa
No 0
SH3KBP1-205
ENSP00000380921
ENST00000397821
Q96B97
[Direct mapping] SH3 domain-containing kinase-binding protein 1
Show all
Q5JPT6
[Target identity:100%; Query identity:100%] GIG10; Migration-inducing gene 18 protein; cDNA, FLJ93821, Homo sapiens SH3-domain kinase binding protein 1 (SH3KBP1), mRNA
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005886 [plasma membrane]
GO:0005911 [cell-cell junction]
GO:0005925 [focal adhesion]
GO:0006897 [endocytosis]
GO:0006915 [apoptotic process]
GO:0007010 [cytoskeleton organization]
GO:0007015 [actin filament organization]
GO:0007267 [cell-cell signaling]
GO:0008360 [regulation of cell shape]
GO:0016020 [membrane]
GO:0016301 [kinase activity]
GO:0016310 [phosphorylation]
GO:0016477 [cell migration]
GO:0017124 [SH3 domain binding]
GO:0030139 [endocytic vesicle]
GO:0030659 [cytoplasmic vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0031625 [ubiquitin protein ligase binding]
GO:0043005 [neuron projection]
GO:0045202 [synapse]
GO:0050871 [positive regulation of B cell activation]
GO:0070161 [anchoring junction]
Show all
665 aa
73.1 kDa
No 0
SH3KBP1-212
ENSP00000514511
ENST00000699668
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0007015 [actin filament organization]
Show all
690 aa
76.1 kDa
No 0
SH3KBP1-214
ENSP00000514513
ENST00000699670
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0007015 [actin filament organization]
Show all
666 aa
73.3 kDa
No 0
SH3KBP1-215
ENSP00000514514
ENST00000699671
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0007015 [actin filament organization]
Show all
647 aa
71.5 kDa
No 0
SH3KBP1-217
ENSP00000514516
ENST00000699673
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0007015 [actin filament organization]
Show all
622 aa
68.5 kDa
No 0
SH3KBP1-218
ENSP00000514517
ENST00000699674
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0007015 [actin filament organization]
Show all
588 aa
64.6 kDa
No 0
SH3KBP1-223
ENSP00000514522
ENST00000699679
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0007015 [actin filament organization]
Show all
658 aa
72.3 kDa
No 0
SH3KBP1-225
ENSP00000514710
ENST00000699720
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0007015 [actin filament organization]
Show all
607 aa
66.4 kDa
No 0
SH3KBP1-226
ENSP00000514544
ENST00000699721
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
444 aa
48.6 kDa
No 0
SH3KBP1-228
ENSP00000514545
ENST00000699723
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0007015 [actin filament organization]
Show all
628 aa
68.5 kDa
No 0
SH3KBP1-230
ENSP00000514547
ENST00000699725
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0007015 [actin filament organization]
Show all
650 aa
71 kDa
No 0
SH3KBP1-231
ENSP00000514711
ENST00000699726
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0007015 [actin filament organization]
Show all
631 aa
69.2 kDa
No 0
SH3KBP1-234
ENSP00000514549
ENST00000699729
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0007015 [actin filament organization]
Show all
563 aa
61.6 kDa
No 0
SH3KBP1-236
ENSP00000514551
ENST00000699731
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0007015 [actin filament organization]
Show all
557 aa
61.1 kDa
No 0
SH3KBP1-237
ENSP00000514712
ENST00000699732
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0007015 [actin filament organization]
Show all
588 aa
64.6 kDa
No 0
SH3KBP1-238
ENSP00000514713
ENST00000699733
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0007015 [actin filament organization]
Show all
588 aa
64.6 kDa
No 0
SH3KBP1-243
ENSP00000514555
ENST00000699738
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
Show all
384 aa
42 kDa
No 0
SH3KBP1-247
ENSP00000514714
ENST00000699742
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0007015 [actin filament organization]
Show all
556 aa
60.8 kDa
No 0

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