HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:46.0 nTPM
HPA Brain:57.5 nTPM
GTEx:46.0 nTPM
FANTOM5:10.7 Scaled Tags Per Million
Pig:50.8 nTPM
Mouse:18.1 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000263Antibody HPA011135Antibody HPA011227Antibody CAB010898Antibody CAB047338
Glial cells HighNot detectedLowMediumNot detected
Neuronal cells MediumNot detectedNot detectedNot detectedMedium











HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 57.5
Sample id Sample description nTPM
Hippocampus
nTPM: 57.5
1855 Male, age 76, left hemisphere 65.7
1898 Male, age 80, left hemisphere 62.8
2529 Female, age 94, left hemisphere 57.0
2621 Female, age 67, right hemisphere 55.3
1911 Female, age 85, right hemisphere 52.3
2148 Female, age 91, left hemisphere 51.9
Dentate gyrus
nTPM: 48.9
2010 Male, age 76, both hemispheres 65.9
2528 Male, age 74, both hemispheres 53.7
2530 Female, age 94, left hemisphere 52.7
2246 Female, age 85, both hemispheres 46.4
2531 Female, age 67, both hemispheres 39.2
1927 Female, age 91, both hemispheres 35.7
Entorhinal gyrus
nTPM: 39.6
2117 Female, age 91, right hemisphere 61.5
1787 Male, age 76, left hemisphere 43.7
2686 Male, age 75, right hemisphere 40.7
1938 Female, age 85, left hemisphere 39.1
2764 Male, age 80, right hemisphere 31.6
2613 Female, age 94, left hemisphere 20.7
Hippocampus, CA1
nTPM: 45.3
1873 Female, age 85, both hemispheres 53.7
2527 Male, age 74, both hemispheres 52.4
2045 Male, age 76, both hemispheres 45.6
2082 Female, age 91, right hemisphere 44.0
2749 Male, age 80, left hemisphere 31.0
Hippocampus, CA2
nTPM: 49.9
2249 Male, age 74, both hemispheres 63.0
1940 Female, age 85, left hemisphere 54.4
2437 Female, age 94, left hemisphere 51.9
2113 Female, age 91, right hemisphere 47.1
1963 Male, age 80, left hemisphere 44.0
1892 Male, age 76, both hemispheres 39.2
Hippocampus, CA3
nTPM: 46.7
1867 Male, age 76, both hemispheres 57.9
2436 Male, age 74, both hemispheres 53.4
1891 Female, age 85, both hemispheres 51.4
2861 Female, age 67, both hemispheres 44.7
2137 Male, age 80, left hemisphere 38.0
2620 Female, age 94, left hemisphere 34.9
Parahippocampal cortex
nTPM: 40.1
2018 Male, age 76, both hemispheres 61.2
2250 Female, age 67, right hemisphere 51.1
2692 Male, age 74, both hemispheres 40.9
2245 Female, age 91, both hemispheres 40.7
1933 Female, age 85, both hemispheres 37.6
1850 Male, age 80, both hemispheres 36.0
1990 Female, age 91, right hemisphere 36.0
2622 Female, age 67, right hemisphere 35.8
2532 Female, age 72, left hemisphere 32.1
2693 Female, age 94, both hemispheres 29.8
Perirhinal gyrus
nTPM: 33.7
2521 Female, age 94, right hemisphere 36.5
1841 Female, age 85, right hemisphere 35.2
1847 Female, age 91, left hemisphere 33.2
1794 Male, age 80, right hemisphere 32.7
2848 Male, age 76, right hemisphere 30.9
Subiculum
nTPM: 52.3
2042 Male, age 76, both hemispheres 78.4
2729 Female, age 91, right hemisphere 60.2
2619 Male, age 74, both hemispheres 48.8
2438 Female, age 94, left hemisphere 47.4
1901 Male, age 80, both hemispheres 45.3
1977 Female, age 85, both hemispheres 34.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 46.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.0
Samples: 197

Max nTPM: 134.4
Min nTPM: 15.9
Std nTPM: 19.9
Median nTPM: 43.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 134.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 128.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 114.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 112.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 109.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 109.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 103.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 97.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 96.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 88.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 84.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 10.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.7
FF:10153-102I9 76 years, female 14.2
FF:10169-103B7 60 years, female 7.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 50.8
Pig sample Sample description nTPM
Subiculum
nTPM: 50.9
Samples: 4

Max nTPM: 68.6
Min nTPM: 40.4
Sample A Female 68.6
Sample B Female 52.2
Sample C Male 42.2
Sample D Male 40.4
Dorsal hippocampus
nTPM: 47.3
Samples: 4

Max nTPM: 62.1
Min nTPM: 31.4
Sample A Female 62.1
Sample B Female 43.3
Sample C Male 52.2
Sample D Male 31.4
Entorhinal cortex
nTPM: 41.2
Samples: 4

Max nTPM: 50.0
Min nTPM: 32.2
Sample A Female 50.0
Sample B Female 44.9
Sample C Male 37.7
Sample D Male 32.2
Ventral hippocampus
nTPM: 50.2
Samples: 4

Max nTPM: 55.8
Min nTPM: 44.9
Sample A Female 54.2
Sample B Female 46.0
Sample C Male 55.8
Sample D Male 44.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 18.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 19.8
Min nTPM: 15.4
Sample A Male 19.8
Sample B Male 15.4
Sample C Female 18.0
Sample D Female 18.3
Hippocampal formation
nTPM: 18.1
Samples: 4

Max nTPM: 20.1
Min nTPM: 16.9
Sample A Male 16.9
Sample B Male 17.4
Sample C Female 17.9
Sample D Female 20.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
71489779 Antisense, RP_050505_01_H03, Mouse strain C57BL/6J (56 days, male) 1.0
74658085 Antisense, RP_060220_04_D11, Mouse strain C57BL/6J (56 days, male) 0.6

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