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CCDC120
HPA
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  • SUMMARY

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  • BRAIN

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  • CCDC120
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CCDC120
Synonyms JM11
Gene descriptioni

Full gene name according to HGNC.

Coiled-coil domain containing 120
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome X
Cytoband p11.23
Chromosome location (bp) 49053572 - 49069857
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000147144 (version 109)
Entrez gene 90060
HGNC HGNC:28910
UniProt Q96HB5 (UniProt - Evidence at protein level)
neXtProt NX_Q96HB5
GeneCards CCDC120
Antibodypedia CCDC120 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Centriolar protein required for centriole subdistal appendage assembly and microtubule anchoring in interphase cells 1. Together with CCDC68, cooperate with subdistal appendage components ODF2, NIN and CEP170 for hierarchical subdistal appendage assembly 2. Recruits NIN and CEP170 to centrosomes 3. Also required for neurite growth. Localizes CYTH2 to vesicles to allow its transport along neurites, and subsequent ARF6 activation and neurite growth.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Developmental protein
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a protein that contains a coiled-coil domain. Several alternatively spliced transcript variants encoding multiple isoforms have been found for this gene. [provided by RefSeq, Nov 2012]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CCDC120-202
ENSP00000474761
ENST00000496529
Q96HB5
[Direct mapping] Coiled-coil domain-containing protein 120
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   Mutated cancer genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005814 [centriole]
GO:0005856 [cytoskeleton]
GO:0008104 [protein localization]
GO:0030426 [growth cone]
GO:0034454 [microtubule anchoring at centrosome]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0120103 [centriolar subdistal appendage]
Show all
630 aa
67.6 kDa
No 0
CCDC120-203
ENSP00000443351
ENST00000536628
Q96HB5
[Direct mapping] Coiled-coil domain-containing protein 120
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   Mutated cancer genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005814 [centriole]
GO:0005856 [cytoskeleton]
GO:0008104 [protein localization]
GO:0030426 [growth cone]
GO:0034454 [microtubule anchoring at centrosome]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0120103 [centriolar subdistal appendage]
Show all
618 aa
66.4 kDa
No 0
CCDC120-204
ENSP00000470294
ENST00000597275
Q96HB5
[Direct mapping] Coiled-coil domain-containing protein 120
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   Mutated cancer genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005814 [centriole]
GO:0005856 [cytoskeleton]
GO:0008104 [protein localization]
GO:0030426 [growth cone]
GO:0034454 [microtubule anchoring at centrosome]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0120103 [centriolar subdistal appendage]
Show all
630 aa
67.6 kDa
No 0
CCDC120-206
ENSP00000474071
ENST00000603986
Q96HB5
[Direct mapping] Coiled-coil domain-containing protein 120
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   Mutated cancer genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005814 [centriole]
GO:0005856 [cytoskeleton]
GO:0008104 [protein localization]
GO:0030426 [growth cone]
GO:0034454 [microtubule anchoring at centrosome]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0120103 [centriolar subdistal appendage]
Show all
696 aa
75 kDa
No 0
CCDC120-207
ENSP00000475676
ENST00000606812
Q96HB5
[Direct mapping] Coiled-coil domain-containing protein 120
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   Mutated cancer genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005768 [endosome]
GO:0005814 [centriole]
GO:0005856 [cytoskeleton]
GO:0008104 [protein localization]
GO:0030426 [growth cone]
GO:0034454 [microtubule anchoring at centrosome]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0120103 [centriolar subdistal appendage]
Show all
630 aa
67.6 kDa
No 0

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