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TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
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VALIDATION
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:586.5 nTPM
GTEx:586.5 nTPM
FANTOM5:64.1 Scaled Tags Per Million

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

586.5
GTEx sample id Sample description nTPM
Retina
Average nTPM: 586.5
Samples: 105

Max nTPM: 940.7
Min nTPM: 180.4
Std nTPM: 149.2
Median nTPM:
321_1 62 years, female 940.7
322_1 76 years, male 921.7
379_1 60 years, male 853.7
377_1 82 years, female 831.6
386_1 76 years, male 804.1
452_1 88 years, female 795.7
355_1 70 years, female 792.4
153_1 70 years, female 776.4
2_1 77 years, female 772.7
17_1 71 years, male 770.2
218_1 71 years, female 767.6
353_1 82 years, female 765.6
384_1 83 years, male 760.2
6_1 73 years, female 748.5
389_1 86 years, female 747.5
376_1 75 years, female 732.7
163_1 78 years, male 695.6
320_1 89 years, female 695.5
311_1 78 years, male 695.0
35_1 74 years, female 692.4
375_1 74 years, female 688.3
189_1 76 years, male 687.9
173_1 67 years, male 682.0
352_1 62 years, male 678.1
120_1 70 years, female 676.3
246_1 77 years, male 672.3
348_1 84 years, male 668.2
447_1 81 years, male 666.1
316_1 62 years, male 664.0
319_1 81 years, male 663.2
526_1 61 years, male 661.8
404_1 82 years, female 659.5
4_1 88 years, female 656.9
145_1 84 years, male 654.6
237_1 82 years, male 651.2
177_1 74 years, male 651.1
243_1 75 years, male 650.6
217_1 76 years, male 648.9
251_1 78 years, male 648.9
137_1 83 years, male 648.5
351_1 91 years, male 648.3
503_1 68 years, male 648.0
318_1 68 years, male 644.9
293_1 68 years, female 638.6
354_1 81 years, female 634.7
405_1 91 years, male 630.4
126_1 63 years, male 624.8
307_1 66 years, female 623.8
349_1 83 years, male 622.2
518_1 75 years, female 617.9
172_1 72 years, female 614.1
335_1 73 years, female 612.6
394_1 75 years, female 612.0
99_1 64 years, male 611.0
350_1 84 years, female 609.9
295_1 61 years, female 607.2
396_1 62 years, male 603.5
506_1 65 years, male 600.1
291_1 76 years, male 598.2
480_1 63 years, male 595.2
495_1 57 years, female 595.0
317_1 60 years, male 594.5
18_1 88 years, male 593.5
229_1 69 years, female 587.0
115_1 83 years, male 584.9
286_1 68 years, female 576.1
292_1 71 years, male 574.4
517_1 88 years, male 573.0
139_1 64 years, female 571.1
265_1 87 years, male 566.4
425_1 59 years, female 563.7
468_1 89 years, male 562.7
406_1 79 years, male 546.4
347_1 72 years, male 544.4
266_1 85 years, male 544.0
356_1 87 years, female 535.1
264_1 73 years, female 523.4
254_1 77 years, female 503.8
109_1 81 years, female 493.4
117_1 61 years, male 472.1
314_1 67 years, male 465.6
499_1 55 years, female 453.4
42_1 85 years, male 450.6
162_1 79 years, female 443.8
324_1 76 years, male 442.8
81_1 67 years, male 439.1
288_1 66 years, female 430.7
9_1 66 years, female 418.4
119_1 70 years, female 418.1
41_1 94 years, female 415.1
315_1 62 years, female 402.1
308_1 70 years, female 401.5
43_1 64 years, female 400.3
142_1 61 years, female 392.1
466_1 57 years, female 371.2
89_1 63 years, male 348.9
32_1 67 years, male 343.5
501_1 88 years, male 338.8
313_1 79 years, female 327.8
415_1 77 years, female 324.7
414_1 84 years, female 298.7
149_1 88 years, male 288.0
491_1 89 years, female 241.4
413_1 59 years, female 208.7
490_1 67 years, female 180.4
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

64.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 64.1
FF:10030-101E3 24-65 years, mixed 64.1

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