HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:90.3 nTPM
HPA Brain:99.5 nTPM
GTEx:90.3 nTPM
FANTOM5:92.1 Scaled Tags Per Million
Pig:122.5 nTPM
Mouse:128.9 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046878
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 99.5
Sample id Sample description nTPM
Hippocampus
nTPM: 82.4
1911 Female, age 85, right hemisphere 93.4
1855 Male, age 76, left hemisphere 84.7
2529 Female, age 94, left hemisphere 81.9
2621 Female, age 67, right hemisphere 81.7
1898 Male, age 80, left hemisphere 78.3
2148 Female, age 91, left hemisphere 74.4
Dentate gyrus
nTPM: 71.4
2010 Male, age 76, both hemispheres 88.4
2530 Female, age 94, left hemisphere 83.8
2246 Female, age 85, both hemispheres 72.2
1927 Female, age 91, both hemispheres 64.9
2528 Male, age 74, both hemispheres 62.9
2531 Female, age 67, both hemispheres 56.0
Entorhinal gyrus
nTPM: 81.6
2117 Female, age 91, right hemisphere 105.0
2764 Male, age 80, right hemisphere 85.9
1938 Female, age 85, left hemisphere 83.0
2686 Male, age 75, right hemisphere 80.3
1787 Male, age 76, left hemisphere 69.2
2613 Female, age 94, left hemisphere 66.4
Hippocampus, CA1
nTPM: 71.9
2527 Male, age 74, both hemispheres 80.7
2045 Male, age 76, both hemispheres 78.2
1873 Female, age 85, both hemispheres 72.5
2082 Female, age 91, right hemisphere 67.5
2749 Male, age 80, left hemisphere 60.6
Hippocampus, CA2
nTPM: 74.8
1963 Male, age 80, left hemisphere 89.6
2249 Male, age 74, both hemispheres 82.1
2113 Female, age 91, right hemisphere 72.7
1940 Female, age 85, left hemisphere 69.0
2437 Female, age 94, left hemisphere 68.5
1892 Male, age 76, both hemispheres 66.8
Hippocampus, CA3
nTPM: 67.0
1891 Female, age 85, both hemispheres 100.7
1867 Male, age 76, both hemispheres 81.0
2436 Male, age 74, both hemispheres 77.8
2137 Male, age 80, left hemisphere 51.1
2861 Female, age 67, both hemispheres 48.2
2620 Female, age 94, left hemisphere 43.3
Parahippocampal cortex
nTPM: 77.0
2532 Female, age 72, left hemisphere 100.6
2692 Male, age 74, both hemispheres 90.8
1850 Male, age 80, both hemispheres 82.1
2018 Male, age 76, both hemispheres 81.6
1990 Female, age 91, right hemisphere 79.0
1933 Female, age 85, both hemispheres 76.5
2245 Female, age 91, both hemispheres 74.8
2622 Female, age 67, right hemisphere 65.7
2693 Female, age 94, both hemispheres 63.2
2250 Female, age 67, right hemisphere 55.7
Perirhinal gyrus
nTPM: 66.2
1847 Female, age 91, left hemisphere 74.3
1794 Male, age 80, right hemisphere 65.2
1841 Female, age 85, right hemisphere 65.2
2848 Male, age 76, right hemisphere 63.6
2521 Female, age 94, right hemisphere 63.0
Subiculum
nTPM: 99.5
2438 Female, age 94, left hemisphere 117.6
2042 Male, age 76, both hemispheres 115.6
1901 Male, age 80, both hemispheres 98.7
1977 Female, age 85, both hemispheres 98.4
2619 Male, age 74, both hemispheres 88.4
2729 Female, age 91, right hemisphere 78.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 90.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 90.3
Samples: 197

Max nTPM: 240.0
Min nTPM: 35.9
Std nTPM: 39.4
Median nTPM: 79.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 240.0
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 228.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 212.3
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 182.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 182.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 182.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 181.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 178.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 177.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 177.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 176.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 92.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 92.1
FF:10153-102I9 76 years, female 92.8
FF:10169-103B7 60 years, female 91.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 122.5
Pig sample Sample description nTPM
Subiculum
nTPM: 77.0
Samples: 4

Max nTPM: 90.1
Min nTPM: 65.2
Sample A Female 90.1
Sample B Female 77.8
Sample C Male 65.2
Sample D Male 74.8
Dorsal hippocampus
nTPM: 122.5
Samples: 4

Max nTPM: 184.1
Min nTPM: 60.6
Sample A Female 184.1
Sample B Female 91.7
Sample C Male 153.7
Sample D Male 60.6
Entorhinal cortex
nTPM: 69.4
Samples: 4

Max nTPM: 79.1
Min nTPM: 64.0
Sample A Female 68.6
Sample B Female 79.1
Sample C Male 66.0
Sample D Male 64.0
Ventral hippocampus
nTPM: 89.8
Samples: 4

Max nTPM: 104.8
Min nTPM: 62.2
Sample A Female 104.8
Sample B Female 62.2
Sample C Male 89.8
Sample D Male 102.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 128.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 111.0
Samples: 4

Max nTPM: 119.0
Min nTPM: 92.6
Sample A Male 118.0
Sample B Male 114.4
Sample C Female 119.0
Sample D Female 92.6
Hippocampal formation
nTPM: 128.9
Samples: 4

Max nTPM: 149.2
Min nTPM: 116.1
Sample A Male 119.8
Sample B Male 116.1
Sample C Female 149.2
Sample D Female 130.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
77910717 Antisense, RP_070208_04_F04, Mouse strain C57BL/6J (56 days, male) 1.5
68321904 Antisense, RP_041207_01_A07, Mouse strain C57BL/6J (56 days, male) 1.0

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