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GINS4
HPA
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  • GINS4
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

GINS4
Synonyms MGC14799, SLD5
Gene descriptioni

Full gene name according to HGNC.

GINS complex subunit 4
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 8
Cytoband p11.21
Chromosome location (bp) 41529218 - 41545030
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000147536 (version 109)
Entrez gene 84296
HGNC HGNC:28226
UniProt Q9BRT9 (UniProt - Evidence at protein level)
neXtProt NX_Q9BRT9
GeneCards GINS4
Antibodypedia GINS4 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Required for correct functioning of the GINS complex, a complex that plays an essential role in the initiation of DNA replication, and progression of DNA replication forks 1, 2. GINS complex is a core component of CDC45-MCM-GINS (CMG) helicase, the molecular machine that unwinds template DNA during replication, and around which the replisome is built 3, 4, 5, 6.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

DNA replication
Gene summary (Entrez)i

Useful information about the gene from Entrez

The yeast heterotetrameric GINS complex is made up of Sld5, Psf1 (GINS1; MIM 610608), Psf2 (GINS2; MIM 610609), and Psf3 (GINS3; MIM 610610). The formation of the GINS complex is essential for the initiation of DNA replication in yeast and Xenopus egg extracts (Ueno et al., 2005). See GINS1 for additional information about the GINS complex.[supplied by OMIM, Mar 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
GINS4-201
ENSP00000276533
ENST00000276533
Q9BRT9
[Direct mapping] DNA replication complex GINS protein SLD5 DNA replication complex GINS protein SLD5, N-terminally processed
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000727 [double-strand break repair via break-induced replication]
GO:0000811 [GINS complex]
GO:0001833 [inner cell mass cell proliferation]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0006260 [DNA replication]
GO:0006261 [DNA-templated DNA replication]
GO:0006268 [DNA unwinding involved in DNA replication]
GO:0071162 [CMG complex]
GO:1900264 [positive regulation of DNA-directed DNA polymerase activity]
GO:1903934 [positive regulation of DNA primase activity]
Show all
223 aa
26 kDa
No 0
GINS4-203
ENSP00000428754
ENST00000518671
Q9BRT9
[Direct mapping] DNA replication complex GINS protein SLD5 DNA replication complex GINS protein SLD5, N-terminally processed
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000727 [double-strand break repair via break-induced replication]
GO:0000811 [GINS complex]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0006260 [DNA replication]
GO:0006261 [DNA-templated DNA replication]
GO:0006268 [DNA unwinding involved in DNA replication]
GO:0071162 [CMG complex]
GO:1900264 [positive regulation of DNA-directed DNA polymerase activity]
GO:1903934 [positive regulation of DNA primase activity]
Show all
223 aa
26 kDa
No 0
GINS4-206
ENSP00000429581
ENST00000520710
Q9BRT9
[Direct mapping] DNA replication complex GINS protein SLD5 DNA replication complex GINS protein SLD5, N-terminally processed
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000727 [double-strand break repair via break-induced replication]
GO:0000811 [GINS complex]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0006260 [DNA replication]
GO:0006261 [DNA-templated DNA replication]
GO:0006268 [DNA unwinding involved in DNA replication]
GO:0071162 [CMG complex]
GO:1900264 [positive regulation of DNA-directed DNA polymerase activity]
GO:1903934 [positive regulation of DNA primase activity]
Show all
100 aa
11.8 kDa
No 0
GINS4-209
ENSP00000428901
ENST00000523277
E5RFF9
[Direct mapping] DNA replication complex GINS protein SLD5
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005694 [chromosome]
GO:0006260 [DNA replication]
GO:0006261 [DNA-templated DNA replication]
Show all
192 aa
22.7 kDa
No 0

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