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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
77.4
nTPM
FANTOM5:
103.3
Scaled Tags Per Million
Allen mouse:
0.2
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
77.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 73.2
2301
Female, age 85, both hemispheres
88.5
2090
Male, age 80, both hemispheres
73.5
2188
Female, age 91, both hemispheres
71.7
1984
Male, age 76, both hemispheres
59.2
Dorsal cochlear nucleus nTPM: 63.9
2187
Female, age 91, both hemispheres
70.9
2378
Male, age 80, both hemispheres
64.2
2058
Male, age 76, both hemispheres
61.6
2802
Male, age 74, right hemisphere
61.6
2370
Male, age 61, both hemispheres
61.1
Dorsal tegmental nucleus nTPM: 70.8
2358
Male, age 61, both hemispheres
79.9
2326
Male, age 74, both hemispheres
75.0
2083
Male, age 80, both hemispheres
67.8
1936
Male, age 76, left hemisphere
60.4
Dorsolateral tegmental area nTPM: 67.3
2337
Male, age 61, both hemispheres
78.1
2751
Female, age 85, both hemispheres
77.5
2654
Male, age 80, both hemispheres
62.5
2360
Male, age 74, both hemispheres
61.1
2141
Male, age 76, both hemispheres
57.4
Kolliker-Fuse nucleus nTPM: 77.4
2315
Male, age 76, right hemisphere
88.5
2793
Female, age 91, left hemisphere
71.9
2163
Male, age 80, both hemispheres
71.7
Lateral lemniscal nuclei nTPM: 65.1
2320
Female, age 91, left hemisphere
70.4
2169
Male, age 76, both hemispheres
70.2
2746
Female, age 85, left hemisphere
68.2
2453
Male, age 74, right hemisphere
68.1
2036
Male, age 80, both hemispheres
48.9
Lateral parabrachial nucleus nTPM: 71.2
2792
Male, age 76, both hemispheres
85.2
2013
Male, age 80, both hemispheres
72.9
2139
Female, age 85, right hemisphere
65.7
2790
Male, age 61, both hemispheres
60.9
Lateral vestibular nucleus nTPM: 70.4
2311
Male, age 80, both hemispheres
72.4
2184
Male, age 76, both hemispheres
68.3
Locus coeruleus nTPM: 61.6
2014
Male, age 55, unknown
64.5
2720
Male, age 74, both hemispheres
64.5
2317
Female, age 72, unknown
63.7
2162
Male, age 80, both hemispheres
60.2
2788
Male, age 74, unknown
59.9
1980
Male, age 76, both hemispheres
59.7
2123
Female, age 91, both hemispheres
58.6
Medial parabrachial nucleus nTPM: 68.9
2170
Female, age 91, both hemispheres
79.5
2854
Male, age 80, both hemispheres
70.9
2463
Female, age 85, right hemisphere
68.5
2156
Male, age 61, both hemispheres
64.9
2786
Male, age 76, both hemispheres
60.8
Medial periolivary nuclei nTPM: 68.5
2791
Male, age 74, right hemisphere
74.1
2063
Male, age 76, both hemispheres
68.5
2081
Male, age 80, both hemispheres
68.4
2171
Female, age 85, both hemispheres
65.9
2458
Female, age 91, both hemispheres
65.8
Motor facial nucleus nTPM: 67.2
2365
Male, age 74, right hemisphere
76.1
2062
Male, age 76, both hemispheres
70.3
2126
Male, age 61, both hemispheres
67.4
2697
Female, age 85, both hemispheres
65.2
2795
Female, age 91, both hemispheres
63.1
2327
Male, age 80, both hemispheres
61.3
Motor trigeminal nucleus nTPM: 64.0
2560
Male, age 74, both hemispheres
68.7
2309
Male, age 76, both hemispheres
64.3
2079
Male, age 80, both hemispheres
64.1
2321
Female, age 91, both hemispheres
62.8
2335
Male, age 61, both hemispheres
60.0
Nuclei of the trapezoid body nTPM: 64.3
1983
Male, age 76, both hemispheres
69.1
2735
Female, age 85, both hemispheres
64.8
2368
Female, age 91, both hemispheres
64.2
2166
Male, age 80, both hemispheres
62.5
2159
Male, age 61, both hemispheres
60.9
Nucleus raphe magnus nTPM: 66.9
2455
Male, age 74, both hemispheres
75.1
2328
Male, age 80, both hemispheres
70.6
2459
Female, age 91, both hemispheres
67.1
2051
Male, age 76, both hemispheres
65.6
2172
Female, age 85, both hemispheres
65.2
2160
Male, age 61, both hemispheres
57.9
Paramedian reticular nucleus nTPM: 69.0
2052
Male, age 76, both hemispheres
74.6
2050
Female, age 85, both hemispheres
71.3
2313
Male, age 61, both hemispheres
65.5
2057
Male, age 80, both hemispheres
64.7
Pedunculopontine tegmental nucleus nTPM: 68.2
2338
Male, age 61, both hemispheres
79.3
2334
Male, age 80, both hemispheres
68.7
1921
Female, age 85, both hemispheres
56.7
Pontine nuclei nTPM: 68.7
2454
Male, age 74, left hemisphere
85.4
2319
Female, age 91, both hemispheres
75.5
2109
Female, age 72, unknown
72.9
1863
Male, age 55, unknown
72.6
1968
Male, age 76, left hemisphere
62.7
2115
Male, age 80, left hemisphere
60.6
2727
Male, age 61, right hemisphere
60.4
2787
Female, age 85, both hemispheres
59.1
Pontine raphe nucleus nTPM: 59.7
2122
Female, age 85, midline
60.3
2853
Male, age 76, midline
59.0
Posteroventral cochlear nucleus nTPM: 71.1
2341
Male, age 80, both hemispheres
81.4
2135
Female, age 91, both hemispheres
73.8
2070
Male, age 76, both hemispheres
71.1
2752
Female, age 85, both hemispheres
67.3
2371
Male, age 61, both hemispheres
61.8
Principal sensory trigeminal nucleus nTPM: 65.9
2324
Male, age 76, both hemispheres
73.6
2367
Female, age 91, left hemisphere
73.5
2008
Male, age 80, left hemisphere
62.8
2158
Male, age 61, both hemispheres
53.8
Reticular pontine nucleus, caudal nTPM: 66.6
2457
Female, age 91, both hemispheres
70.1
2559
Male, age 74, both hemispheres
69.4
2092
Male, age 76, both hemispheres
67.0
2332
Male, age 80, right hemisphere
60.0
Reticular pontine nucleus, oral nTPM: 73.9
2361
Male, age 74, both hemispheres
88.4
1939
Male, age 80, both hemispheres
74.0
2012
Female, age 85, both hemispheres
70.9
2366
Female, age 91, both hemispheres
70.3
2167
Male, age 76, both hemispheres
66.1
Reticulotegmental nucleus nTPM: 67.9
2322
Female, age 91, both hemispheres
72.8
2333
Male, age 80, both hemispheres
69.8
2452
Male, age 74, both hemispheres
69.5
2325
Male, age 76, both hemispheres
59.4
Spinal trigeminal nucleus, oral nTPM: 64.3
2164
Male, age 80, both hemispheres
69.4
1978
Male, age 76, both hemispheres
63.1
2737
Female, age 85, both hemispheres
60.3
Subcoeruleus area nTPM: 65.8
2369
Female, age 85, left hemisphere
78.8
2323
Female, age 91, left hemisphere
67.0
1958
Male, age 80, both hemispheres
66.4
2451
Male, age 74, both hemispheres
60.8
2089
Male, age 76, left hemisphere
55.8
Superior olive nTPM: 69.7
2364
Male, age 74, right hemisphere
85.8
2329
Male, age 80, right hemisphere
70.9
2020
Male, age 76, both hemispheres
69.5
1875
Female, age 85, both hemispheres
63.2
2561
Female, age 91, both hemispheres
59.2
Ventral periolivary nuclei nTPM: 66.5
2023
Male, age 76, both hemispheres
74.0
2130
Female, age 85, both hemispheres
72.2
2165
Male, age 80, both hemispheres
65.5
2794
Female, age 91, left hemisphere
54.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 66.7
2840
Female, age 85, both hemispheres
72.4
2161
Male, age 80, both hemispheres
69.4
2449
Male, age 74, both hemispheres
68.4
2359
Male, age 61, both hemispheres
64.5
1959
Male, age 76, both hemispheres
63.4
2456
Female, age 91, both hemispheres
62.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
