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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:99.5 nTPM
GTEx:99.5 nTPM
FANTOM5:21.2 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA043831
Squamous epithelial cells Not detected



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

99.5
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 99.5
Samples: 156

Max nTPM: 342.8
Min nTPM: 0.0
Std nTPM: 90.7
Median nTPM: 85.0
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 342.8
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 327.8
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 326.3
GTEX-14PKU-1326-SM-6871B 40-49 years, female 298.9
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 289.4
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 279.0
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 278.3
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 277.5
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 277.3
GTEX-S341-1226-SM-4AD5S 40-49 years, female 259.7
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 246.4
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 239.3
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 239.0
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 236.6
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 231.3
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 230.5
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 228.2
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 224.9
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 221.0
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 214.0
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 210.7
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 208.1
GTEX-11I78-2026-SM-5987C 50-59 years, female 207.2
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 198.5
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 196.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 195.3
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 195.2
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 195.1
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 189.7
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 186.1
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 185.4
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 177.4
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 177.3
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 173.2
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 171.4
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 169.5
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 166.9
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 165.8
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 165.7
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 160.3
GTEX-1C475-0526-SM-793AC 40-49 years, female 159.1
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 158.8
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 157.6
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 154.8
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 154.1
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 153.8
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 150.9
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 149.8
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 148.9
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 148.7
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 144.5
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 142.4
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 134.2
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 133.5
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 133.1
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 132.4
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 131.2
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 130.8
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 130.4
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 130.3
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 125.5
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 125.3
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 123.3
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 119.0
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 118.9
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 116.4
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 115.7
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 110.9
GTEX-QCQG-1226-SM-48U23 50-59 years, female 110.8
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 109.0
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 106.3
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 105.2
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 104.6
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 102.2
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 101.6
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 99.6
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 98.0
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 86.5
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 83.5
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 80.6
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 78.5
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 77.1
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 76.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 73.0
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 71.3
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 68.0
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 62.1
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 58.5
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 57.1
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 52.4
GTEX-16NPV-2526-SM-6M483 50-59 years, female 51.8
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 50.3
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 50.1
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 49.9
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 49.2
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 47.8
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 46.4
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 44.4
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 43.8
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 37.2
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 33.8
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 30.9
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 28.9
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 28.8
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 22.8
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 21.8
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 21.7
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 19.1
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 18.2
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 15.6
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 14.8
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 13.8
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 13.7
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 13.1
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 11.6
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 11.2
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 10.1
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 9.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 8.8
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 8.2
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 7.0
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 6.7
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 4.8
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 3.9
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 3.7
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 3.4
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 1.3
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 1.3
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 1.0
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 0.8
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 0.8
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 0.6
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 0.5
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 0.4
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 0.4
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 0.4
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 0.4
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 0.4
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 0.3
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 0.3
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 0.3
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 0.2
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 0.2
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 0.2
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 0.2
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 0.2
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 0.2
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 0.2
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 0.2
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 0.1
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 0.1
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 0.1
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 0.1
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 0.1
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 0.1
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 0.0
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

21.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 21.2
FF:10204-103F6 68 years, female 21.2

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