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NDUFB9
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  • NDUFB9
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:295.0 nTPM
FANTOM5:269.9 Scaled Tags Per Million
Pig:145.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042768
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

295.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 295.0
Samples: 246

Max nTPM: 882.5
Min nTPM: 126.7
Std nTPM: 100.6
Median nTPM: 274.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 882.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 843.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 781.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 771.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 667.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 562.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 522.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 507.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 496.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 495.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 466.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 457.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 449.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 437.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 434.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 422.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 407.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 405.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 403.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 402.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 402.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 402.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 400.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 396.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 392.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 391.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 390.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 388.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 382.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 379.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 376.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 373.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 372.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 371.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 371.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 368.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 365.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 361.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 357.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 354.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 352.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 352.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 351.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 350.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 350.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 350.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 347.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 346.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 345.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 344.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 342.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 340.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 337.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 334.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 331.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 330.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 329.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 329.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 325.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 325.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 324.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 322.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 321.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 321.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 319.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 318.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 317.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 314.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 314.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 313.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 313.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 313.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 311.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 311.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 310.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 310.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 308.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 308.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 305.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 303.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 303.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 303.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 302.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 300.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 299.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 298.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 297.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 297.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 297.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 296.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 295.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 294.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 293.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 293.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 292.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 292.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 291.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 291.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 290.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 288.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 288.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 288.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 288.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 288.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 287.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 287.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 287.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 287.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 287.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 286.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 286.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 284.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 282.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 282.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 282.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 280.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 280.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 279.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 277.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 276.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 275.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 275.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 274.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 274.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 272.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 272.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 272.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 271.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 271.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 271.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 270.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 270.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 269.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 269.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 269.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 268.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 267.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 267.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 267.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 266.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 265.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 265.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 265.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 265.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 264.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 263.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 263.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 263.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 261.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 261.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 260.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 260.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 260.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 259.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 259.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 258.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 258.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 258.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 257.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 257.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 256.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 256.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 255.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 254.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 253.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 253.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 252.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 250.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 250.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 249.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 248.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 248.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 248.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 247.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 246.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 245.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 245.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 244.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 244.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 244.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 244.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 242.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 241.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 241.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 240.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 239.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 236.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 236.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 236.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 235.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 234.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 231.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 229.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 228.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 227.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 227.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 226.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 226.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 226.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 225.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 224.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 223.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 223.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 222.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 222.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 221.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 220.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 219.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 218.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 217.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 216.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 214.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 214.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 213.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 211.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 210.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 209.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 209.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 208.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 204.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 204.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 203.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 203.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 200.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 200.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 199.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 198.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 197.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 197.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 195.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 191.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 191.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 190.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 189.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 186.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 186.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 183.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 181.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 179.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 179.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 175.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 174.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 161.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 152.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 135.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 126.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

269.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 269.9
FF:10164-103B2 76 years, female 269.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

145.2
Pig sample Sample description nTPM
Caudate
nTPM: 145.2
Samples: 4

Max nTPM: 180.4
Min nTPM: 121.2
Sample A Female 121.2
Sample B Female 149.1
Sample C Male 180.4
Sample D Male 130.0

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