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CDKN2B
HPA
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  • CDKN2B
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CDKN2B
Synonyms CDK4I, INK4B, MTS2, P15, p15INK4b, TP15
Gene descriptioni

Full gene name according to HGNC.

Cyclin dependent kinase inhibitor 2B
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 9
Cytoband p21.3
Chromosome location (bp) 22002903 - 22009305
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

2
Ensembl ENSG00000147883 (version 109)
Entrez gene 1030
HGNC HGNC:1788
UniProt P42772 (UniProt - Evidence at protein level)
neXtProt NX_P42772
GeneCards CDKN2B
Antibodypedia CDKN2B antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Interacts strongly with CDK4 and CDK6. Potent inhibitor. Potential effector of TGF-beta induced cell cycle arrest.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cell cycle
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene lies adjacent to the tumor suppressor gene CDKN2A in a region that is frequently mutated and deleted in a wide variety of tumors. This gene encodes a cyclin-dependent kinase inhibitor, which forms a complex with CDK4 or CDK6, and prevents the activation of the CDK kinases, thus the encoded protein functions as a cell growth regulator that controls cell cycle G1 progression. The expression of this gene was found to be dramatically induced by TGF beta, which suggested its role in the TGF beta induced growth inhibition. Two alternatively spliced transcript variants of this gene, which encode distinct proteins, have been reported. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CDKN2B-201
ENSP00000276925
ENST00000276925
P42772
[Direct mapping] Cyclin-dependent kinase 4 inhibitor B
Show all
K7PPU3
[Target identity:100%; Query identity:100%] Cyclin-dependent kinase inhibitor 2B; Cyclin-dependent kinase inhibitor 2B (P15, inhibits CDK4), isoform CRA_b; p15
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cancers
   Cancers of the lung and pleura
   Skin cancers
   Cancers of soft tissues and bone
   Cancers of eye, brain, and central nervous system
   Cancers of haematopoietic and lymphoid tissues
   Endocrine and metabolic diseases
   Diabetes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000079 [regulation of cyclin-dependent protein serine/threonine kinase activity]
GO:0001889 [liver development]
GO:0004861 [cyclin-dependent protein serine/threonine kinase inhibitor activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0007049 [cell cycle]
GO:0007568 [aging]
GO:0008285 [negative regulation of cell population proliferation]
GO:0014070 [response to organic cyclic compound]
GO:0016301 [kinase activity]
GO:0016310 [phosphorylation]
GO:0019901 [protein kinase binding]
GO:0030219 [megakaryocyte differentiation]
GO:0030511 [positive regulation of transforming growth factor beta receptor signaling pathway]
GO:0030858 [positive regulation of epithelial cell differentiation]
GO:0031668 [cellular response to extracellular stimulus]
GO:0031670 [cellular response to nutrient]
GO:0034097 [response to cytokine]
GO:0042326 [negative regulation of phosphorylation]
GO:0045736 [negative regulation of cyclin-dependent protein serine/threonine kinase activity]
GO:0048536 [spleen development]
GO:0050680 [negative regulation of epithelial cell proliferation]
GO:0060253 [negative regulation of glial cell proliferation]
GO:0070316 [regulation of G0 to G1 transition]
GO:0071560 [cellular response to transforming growth factor beta stimulus]
GO:0090398 [cellular senescence]
GO:1902807 [negative regulation of cell cycle G1/S phase transition]
GO:2000045 [regulation of G1/S transition of mitotic cell cycle]
GO:2000134 [negative regulation of G1/S transition of mitotic cell cycle]
Show all
138 aa
14.7 kDa
No 0
CDKN2B-202
ENSP00000369487
ENST00000380142
P42772
[Direct mapping] Cyclin-dependent kinase 4 inhibitor B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Cancers
   Cancers of the lung and pleura
   Skin cancers
   Cancers of soft tissues and bone
   Cancers of eye, brain, and central nervous system
   Cancers of haematopoietic and lymphoid tissues
   Endocrine and metabolic diseases
   Diabetes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000079 [regulation of cyclin-dependent protein serine/threonine kinase activity]
GO:0004861 [cyclin-dependent protein serine/threonine kinase inhibitor activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0007049 [cell cycle]
GO:0008285 [negative regulation of cell population proliferation]
GO:0019901 [protein kinase binding]
GO:0030219 [megakaryocyte differentiation]
GO:0030511 [positive regulation of transforming growth factor beta receptor signaling pathway]
GO:0031668 [cellular response to extracellular stimulus]
GO:0031670 [cellular response to nutrient]
GO:0042326 [negative regulation of phosphorylation]
GO:0045736 [negative regulation of cyclin-dependent protein serine/threonine kinase activity]
GO:0050680 [negative regulation of epithelial cell proliferation]
GO:0070316 [regulation of G0 to G1 transition]
GO:0090398 [cellular senescence]
GO:2000045 [regulation of G1/S transition of mitotic cell cycle]
Show all
78 aa
8.1 kDa
No 0

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