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ZCCHC7
HPA
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  • ZCCHC7
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ZCCHC7
Synonyms AIR1, FLJ22611
Gene descriptioni

Full gene name according to HGNC.

Zinc finger CCHC-type containing 7
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 9
Cytoband p13.2
Chromosome location (bp) 37120574 - 37358149
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000147905 (version 109)
Entrez gene 84186
HGNC HGNC:26209
UniProt Q8N3Z6 (UniProt - Evidence at protein level)
neXtProt NX_Q8N3Z6
GeneCards ZCCHC7
Antibodypedia ZCCHC7 antibodies


PROTEIN FUNCTION
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Metal-binding, Zinc
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables RNA binding activity. Located in cytosol and nucleolus. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ZCCHC7-201
ENSP00000316365
ENST00000322831
X6R4A7
[Direct mapping] Zinc finger CCHC domain-containing protein 7
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005730 [nucleolus]
GO:0005829 [cytosol]
Show all
205 aa
23 kDa
No 0
ZCCHC7-202
ENSP00000337839
ENST00000336755
Q8N3Z6
[Direct mapping] Zinc finger CCHC domain-containing protein 7
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005730 [nucleolus]
GO:0005829 [cytosol]
GO:0008270 [zinc ion binding]
GO:0031499 [TRAMP complex]
GO:0043629 [ncRNA polyadenylation]
GO:0046872 [metal ion binding]
GO:0071031 [nuclear mRNA surveillance of mRNA 3'-end processing]
GO:0071035 [nuclear polyadenylation-dependent rRNA catabolic process]
GO:0071036 [nuclear polyadenylation-dependent snoRNA catabolic process]
GO:0071037 [nuclear polyadenylation-dependent snRNA catabolic process]
GO:0071038 [nuclear polyadenylation-dependent tRNA catabolic process]
GO:0071039 [nuclear polyadenylation-dependent CUT catabolic process]
Show all
543 aa
63.1 kDa
No 0
ZCCHC7-209
ENSP00000443113
ENST00000534928
Q8N3Z6
[Direct mapping] Zinc finger CCHC domain-containing protein 7
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003676 [nucleic acid binding]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005730 [nucleolus]
GO:0005829 [cytosol]
GO:0008270 [zinc ion binding]
GO:0031499 [TRAMP complex]
GO:0043629 [ncRNA polyadenylation]
GO:0046872 [metal ion binding]
GO:0071031 [nuclear mRNA surveillance of mRNA 3'-end processing]
GO:0071035 [nuclear polyadenylation-dependent rRNA catabolic process]
GO:0071036 [nuclear polyadenylation-dependent snoRNA catabolic process]
GO:0071037 [nuclear polyadenylation-dependent snRNA catabolic process]
GO:0071038 [nuclear polyadenylation-dependent tRNA catabolic process]
GO:0071039 [nuclear polyadenylation-dependent CUT catabolic process]
Show all
543 aa
63.1 kDa
No 0

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