We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
FAM171A1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • FAM171A1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:81.2 nTPM
HPA Brain:127.7 nTPM
GTEx:81.2 nTPM
FANTOM5:60.9 Scaled Tags Per Million
Pig:70.3 nTPM
Mouse:54.3 nTPM
Allen mouse:3.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051345
Glial cells Low
Neuronal cells Medium


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

127.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 127.7
1857 Female, age 85, left hemisphere 159.9
2290 Female, age 72, unknown 155.7
2289 Male, age 61, right hemisphere 133.1
1854 Male, age 80, left hemisphere 128.4
2846 Female, age 79, unknown 122.0
2288 Male, age 75, left hemisphere 114.1
2481 Female, age 94, left hemisphere 112.9
1781 Male, age 74, unknown 95.7
Globus pallidus, externus
nTPM: 101.0
2646 Male, age 61, right hemisphere 118.4
1996 Male, age 80, right hemisphere 104.1
2772 Female, age 79, unknown 95.4
2567 Female, age 72, unknown 94.3
2395 Male, age 75, both hemispheres 92.9
Globus pallidus, internus
nTPM: 104.1
2111 Female, age 85, right hemisphere 125.1
2287 Male, age 75, right hemisphere 114.7
2778 Female, age 91, both hemispheres 109.4
1818 Male, age 74, unknown 100.4
2483 Female, age 94, right hemisphere 96.9
2037 Male, age 80, right hemisphere 92.6
2566 Female, age 72, unknown 89.4
Nucleus accumbens
nTPM: 118.4
2824 Male, age 61, right hemisphere 145.6
1806 Female, age 85, left hemisphere 143.7
1783 Male, age 74, unknown 128.2
1856 Female, age 91, right hemisphere 124.1
2698 Female, age 72, unknown 113.4
2286 Male, age 75, left hemisphere 106.2
2391 Female, age 94, left hemisphere 102.9
2732 Male, age 80, right hemisphere 82.8
Nucleus basalis of Meynert
nTPM: 109.3
2569 Male, age 61, both hemispheres 127.0
2393 Male, age 80, right hemisphere 116.3
2484 Female, age 94, left hemisphere 110.0
2821 Male, age 75, both hemispheres 84.0
Nucleus of the diagonal band
nTPM: 78.4
1812 Female, age 91, both hemispheres 84.0
1979 Male, age 74, unknown 83.2
2029 Male, age 61, right hemisphere 79.9
2775 Male, age 80, right hemisphere 73.4
2195 Female, age 85, both hemispheres 71.7
Putamen
nTPM: 125.2
1829 Male, age 74, unknown 144.1
1838 Male, age 80, right hemisphere 138.1
2489 Female, age 72, unknown 136.3
2466 Female, age 79, unknown 127.9
1937 Female, age 91, right hemisphere 117.8
2647 Male, age 75, left hemisphere 114.3
2482 Female, age 94, left hemisphere 98.0
Septal nuclei
nTPM: 75.1
2394 Male, age 61, left hemisphere 85.6
2059 Female, age 85, both hemispheres 84.4
1960 Male, age 74, unknown 79.7
2629 Female, age 94, right hemisphere 72.7
2031 Female, age 72, unknown 70.0
2199 Male, age 80, right hemisphere 68.4
2009 Female, age 91, both hemispheres 65.1
Stria terminalis, bed nucleus
nTPM: 72.7
2486 Female, age 94, both hemispheres 76.4
2201 Male, age 74, unknown 74.9
1974 Female, age 91, both hemispheres 66.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 81.2
Samples: 246

Max nTPM: 165.8
Min nTPM: 33.5
Std nTPM: 23.1
Median nTPM: 80.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 165.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 138.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 134.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 133.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 128.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 127.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 126.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 126.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 122.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 121.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 120.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 119.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 118.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 117.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 116.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 116.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 116.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 115.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 115.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 114.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 114.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 113.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 113.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 112.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 112.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 111.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 111.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 111.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 111.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 110.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 110.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 110.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 109.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 108.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 108.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 108.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 108.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 107.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 107.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 105.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 104.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 103.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 103.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 103.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 102.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 101.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 101.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 101.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 100.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 99.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 98.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 98.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 98.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 98.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 97.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 97.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 97.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 97.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 96.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 96.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 96.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 96.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 96.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 96.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 95.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 95.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 95.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 95.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 95.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 94.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 94.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 94.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 94.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 93.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 93.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 93.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 93.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 93.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 92.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 92.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 91.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 91.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 91.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 91.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 90.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 90.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 90.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 89.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 89.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 89.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 89.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 88.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 88.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 88.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 88.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 88.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 88.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 88.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 87.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 87.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 86.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 86.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 86.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 85.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 85.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 84.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 84.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 84.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 84.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 84.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 84.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 83.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 83.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 82.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 82.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 81.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 81.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 81.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 80.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 80.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 80.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 80.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 80.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 80.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 80.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 79.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 79.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 79.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 79.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 79.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 79.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 78.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 78.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 77.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 77.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 76.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 76.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 76.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 76.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 75.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 75.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 74.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 74.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 74.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 73.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 73.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 73.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 73.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 73.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 73.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 72.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 72.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 72.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 71.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 71.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 71.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 71.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 71.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 71.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 70.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 70.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 70.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 70.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 70.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 69.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 69.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 69.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 69.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 69.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 69.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 69.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 68.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 68.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 68.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 68.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 68.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 67.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 66.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 66.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 65.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 65.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 65.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 65.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 65.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 64.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 64.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 64.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 63.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 63.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 63.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 63.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 63.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 62.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 62.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 60.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 60.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 60.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 60.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 58.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 57.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 57.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 57.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 57.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 57.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 57.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 56.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 55.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 55.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 54.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 54.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 54.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 54.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 53.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 53.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 53.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 53.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 53.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 53.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 52.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 52.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 51.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 51.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 51.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 51.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 49.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 48.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 48.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 47.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 47.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 46.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 45.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 44.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 42.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 42.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 42.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 42.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 41.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 41.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 41.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 41.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 41.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 40.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 39.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 38.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 37.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 33.5
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 74.5
Samples: 246

Max nTPM: 130.4
Min nTPM: 20.7
Std nTPM: 22.6
Median nTPM: 77.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 130.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 125.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 123.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 121.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 116.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 112.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 112.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 110.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 108.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 108.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 108.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 108.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 108.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 107.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 107.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 106.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 106.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 105.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 105.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 104.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 104.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 104.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 103.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 103.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 102.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 102.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 102.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 102.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 102.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 102.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 102.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 100.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 100.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 100.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 99.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 99.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 98.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 98.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 98.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 98.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 97.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 97.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 96.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 96.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 96.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 96.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 96.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 95.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 95.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 95.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 95.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 94.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 94.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 94.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 94.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 93.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 92.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 91.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 91.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 91.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 90.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 90.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 90.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 89.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 89.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 89.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 89.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 89.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 88.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 88.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 88.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 88.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 88.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 87.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 86.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 86.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 86.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 86.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 85.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 85.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 85.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 85.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 85.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 84.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 84.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 84.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 84.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 84.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 84.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 84.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 83.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 83.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 83.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 82.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 82.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 82.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 82.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 82.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 81.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 81.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 81.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 81.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 81.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 81.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 81.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 80.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 80.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 80.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 80.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 79.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 79.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 78.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 78.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 78.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 78.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 78.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 78.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 77.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 77.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 77.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 77.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 77.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 77.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 77.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 76.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 76.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 76.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 76.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 75.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 75.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 74.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 74.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 74.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 74.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 74.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 74.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 73.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 73.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 73.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 72.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 72.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 72.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 72.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 72.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 72.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 72.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 72.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 71.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 71.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 71.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 71.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 71.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 71.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 69.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 69.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 69.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 69.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 68.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 68.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 68.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 67.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 67.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 66.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 66.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 65.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 64.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 64.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 64.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 63.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 62.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 62.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 61.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 61.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 61.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 60.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 60.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 60.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 58.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 57.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 57.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 57.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 57.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 57.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 56.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 56.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 56.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 56.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 55.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 55.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 55.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 55.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 54.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 52.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 52.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 52.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 52.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 51.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 51.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 50.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 50.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 50.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 50.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 49.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 49.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 49.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 49.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 48.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 48.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 48.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 48.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 48.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 47.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 47.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 45.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 44.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 44.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 44.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 44.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 44.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 44.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 43.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 43.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 41.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 41.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 40.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 40.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 39.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 37.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 37.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 36.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 36.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 35.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 35.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 35.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 35.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 34.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 33.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 32.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 32.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 31.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 30.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 29.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 27.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 26.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 24.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 20.7
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 78.3
Samples: 205

Max nTPM: 128.9
Min nTPM: 28.0
Std nTPM: 20.6
Median nTPM: 78.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 128.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 122.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 121.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 121.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 117.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 116.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 115.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 114.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 114.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 113.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 113.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 113.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 111.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 111.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 110.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 110.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 110.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 109.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 109.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 108.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 107.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 106.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 106.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 105.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 105.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 104.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 103.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 103.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 102.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 102.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 102.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 101.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 101.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 99.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 98.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 98.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 96.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 95.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 95.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 95.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 95.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 95.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 94.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 93.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 93.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 93.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 93.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 93.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 92.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 92.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 92.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 92.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 92.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 91.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 91.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 91.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 91.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 91.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 90.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 89.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 89.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 88.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 88.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 87.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 87.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 87.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 86.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 86.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 86.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 86.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 85.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 85.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 85.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 85.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 85.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 85.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 84.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 84.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 84.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 84.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 84.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 83.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 83.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 83.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 82.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 82.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 82.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 82.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 81.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 81.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 81.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 81.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 80.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 80.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 79.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 79.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 79.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 79.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 78.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 78.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 78.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 78.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 78.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 77.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 77.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 77.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 77.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 77.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 77.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 77.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 76.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 76.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 76.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 76.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 75.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 75.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 75.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 74.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 74.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 73.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 72.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 72.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 72.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 71.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 71.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 70.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 70.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 70.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 70.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 70.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 70.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 70.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 70.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 70.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 70.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 69.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 69.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 69.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 69.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 68.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 68.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 67.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 67.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 67.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 67.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 67.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 66.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 66.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 66.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 65.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 65.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 65.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 64.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 64.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 64.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 63.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 63.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 62.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 62.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 62.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 62.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 61.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 60.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 60.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 60.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 60.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 60.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 59.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 58.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 58.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 58.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 57.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 57.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 57.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 56.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 56.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 54.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 54.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 54.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 53.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 52.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 52.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 50.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 50.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 50.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 50.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 50.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 49.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 48.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 48.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 47.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 46.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 45.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 44.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 43.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 41.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 41.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 40.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 39.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 39.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 37.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 34.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 34.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 33.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 28.0
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

60.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 60.9
FF:10164-103B2 76 years, female 60.9
Nucleus accumbens
Scaled Tags Per Million: 57.4
FF:10037-101F1 23-56 years, mixed 57.4
Putamen
Scaled Tags Per Million: 59.5
FF:10176-103C5 60 years, female 59.5
Globus pallidus
Scaled Tags Per Million: 51.6
FF:10175-103C4 60 years, female 58.8
FF:10161-103A8 76 years, female 44.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.3
Pig sample Sample description nTPM
Caudate
nTPM: 70.3
Samples: 4

Max nTPM: 83.1
Min nTPM: 56.5
Sample A Female 56.5
Sample B Female 65.8
Sample C Male 83.1
Sample D Male 75.9
Putamen
nTPM: 62.8
Samples: 4

Max nTPM: 78.9
Min nTPM: 34.9
Sample A Female 34.9
Sample B Female 58.7
Sample C Male 78.9
Sample D Male 78.5
Septum
nTPM: 40.7
Samples: 4

Max nTPM: 56.6
Min nTPM: 27.2
Sample A Female 56.6
Sample B Female 48.8
Sample C Male 30.0
Sample D Male 27.2
Ventral pallidum
nTPM: 52.4
Samples: 4

Max nTPM: 69.3
Min nTPM: 37.4
Sample A Female 69.3
Sample B Female 46.8
Sample C Male 37.4
Sample D Male 56.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 54.3
Samples: 4

Max nTPM: 57.7
Min nTPM: 51.0
Sample A Male 57.0
Sample B Male 57.7
Sample C Female 51.0
Sample D Female 51.6
Septum
nTPM: 37.5
Samples: 4

Max nTPM: 40.3
Min nTPM: 35.3
Sample A Male 35.9
Sample B Male 38.4
Sample C Female 35.3
Sample D Female 40.3
Ventral forebrain
nTPM: 48.3
Samples: 4

Max nTPM: 48.8
Min nTPM: 47.5
Sample A Male 48.8
Sample B Male 48.3
Sample C Female 47.5
Sample D Female 48.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.7
69447822 Antisense, RP_050419_02_B06, Mouse strain C57BL/6J (56 days, male) 5.9
72283797 Antisense, RP_051027_01_B03, Mouse strain C57BL/6J (56 days, male) 1.5
Pallidum
Expression energy: 1.9
69447822 Antisense, RP_050419_02_B06, Mouse strain C57BL/6J (56 days, male) 3.4
72283797 Antisense, RP_051027_01_B03, Mouse strain C57BL/6J (56 days, male) 0.4

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org