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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
55.1
nTPM
HPA Brain:
102.1
nTPM
GTEx:
55.1
nTPM
FANTOM5:
198.6
Scaled Tags Per Million
Pig:
51.9
nTPM
Mouse:
121.4
nTPM
Allen mouse:
15.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
102.1
Sample id
Sample description
nTPM
Amygdala nTPM: 102.1
2695
Female, age 67, right hemisphere
145.3
2514
Male, age 75, right hemisphere
97.5
2814
Male, age 76, right hemisphere
94.7
2517
Female, age 94, left hemisphere
86.9
1987
Female, age 91, left hemisphere
86.3
Basal amygdala nTPM: 96.4
2609
Male, age 75, right hemisphere
163.7
2243
Female, age 91, right hemisphere
98.2
2685
Female, age 94, left hemisphere
92.0
1955
Male, age 76, both hemispheres
85.7
2110
Male, age 80, left hemisphere
79.9
2827
Female, age 67, right hemisphere
59.1
Central amygdala nTPM: 96.5
2515
Male, age 75, right hemisphere
134.3
2826
Female, age 94, left hemisphere
95.0
1905
Male, age 76, both hemispheres
91.9
2701
Female, age 91, right hemisphere
89.7
2239
Male, age 80, left hemisphere
71.3
Corticomedial amygdala nTPM: 93.8
2428
Male, age 75, right hemisphere
137.6
2829
Male, age 80, left hemisphere
103.2
2429
Female, age 94, left hemisphere
90.4
2242
Female, age 91, right hemisphere
87.6
2535
Female, age 67, right hemisphere
72.6
2240
Male, age 76, both hemispheres
71.5
Lateral amygdala nTPM: 97.9
2516
Male, age 75, right hemisphere
148.8
1883
Male, age 76, both hemispheres
117.8
2534
Female, age 94, left hemisphere
94.3
2256
Male, age 80, left hemisphere
85.7
2255
Female, age 91, right hemisphere
80.6
2830
Female, age 67, right hemisphere
60.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
55.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 55.1
Samples: 152
Max nTPM: 98.0
Min nTPM: 13.6
Std nTPM: 16.5
Median nTPM: 53.9
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
98.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
92.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
89.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
89.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
84.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
83.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
82.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
82.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
81.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
81.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
79.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
79.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
79.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
77.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
77.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
76.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
76.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
75.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
75.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
74.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
74.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
74.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
73.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
72.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
71.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
71.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
71.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
70.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
70.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
69.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
69.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
69.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
69.0
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
68.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
68.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
67.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
67.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
67.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
67.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
66.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
66.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
66.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
65.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
65.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
65.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
65.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
65.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
64.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
64.6
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
63.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
63.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
63.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
62.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
62.2
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
62.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
61.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
61.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
60.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
60.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
60.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
59.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
59.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
59.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
59.0
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
58.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
57.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
57.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
56.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
56.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
56.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
55.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
55.2
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
54.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
54.7
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
54.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
54.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
53.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
53.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
53.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
53.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
53.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
53.2
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
53.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
52.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
52.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
51.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
51.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
51.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
51.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
50.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
50.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
50.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
50.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
50.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
50.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
49.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
49.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
48.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
48.4
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
48.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
48.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
48.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
47.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
47.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
46.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
46.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
46.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
45.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
45.4
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
45.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
44.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
44.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
43.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
43.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
42.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
42.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
42.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
42.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
41.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
41.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
41.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
41.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
40.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
40.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
39.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
39.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
38.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
37.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
36.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
35.3
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
35.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
35.0
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
34.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
34.7
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
34.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
34.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
33.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
33.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
33.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
31.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
30.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
30.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
30.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
29.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
29.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
28.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
26.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
26.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
25.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
23.5
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
13.8
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
13.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
121.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 121.4
Samples: 4
Max nTPM: 147.6
Min nTPM: 102.1
Sample A
Male
118.6
Sample B
Male
117.4
Sample C
Female
147.6
Sample D
Female
102.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
