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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:42.0 nTPM
HPA Brain:12.8 nTPM
GTEx:42.0 nTPM
FANTOM5:144.8 Scaled Tags Per Million
Pig:36.6 nTPM
Mouse:20.6 nTPM
Allen mouse:0.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA048738Antibody CAB026161
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

12.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 10.6
2481 Female, age 94, left hemisphere 15.8
1854 Male, age 80, left hemisphere 14.0
1781 Male, age 74, unknown 11.0
1857 Female, age 85, left hemisphere 10.9
2290 Female, age 72, unknown 10.1
2846 Female, age 79, unknown 9.1
2289 Male, age 61, right hemisphere 9.0
2288 Male, age 75, left hemisphere 4.8
Globus pallidus, externus
nTPM: 10.4
1996 Male, age 80, right hemisphere 19.6
2772 Female, age 79, unknown 11.6
2646 Male, age 61, right hemisphere 9.0
2395 Male, age 75, both hemispheres 6.5
2567 Female, age 72, unknown 5.6
Globus pallidus, internus
nTPM: 9.7
2037 Male, age 80, right hemisphere 17.0
2483 Female, age 94, right hemisphere 13.8
2566 Female, age 72, unknown 13.7
2778 Female, age 91, both hemispheres 7.2
1818 Male, age 74, unknown 6.3
2111 Female, age 85, right hemisphere 5.3
2287 Male, age 75, right hemisphere 4.9
Nucleus accumbens
nTPM: 7.6
2732 Male, age 80, right hemisphere 15.8
2698 Female, age 72, unknown 14.7
1806 Female, age 85, left hemisphere 7.2
2286 Male, age 75, left hemisphere 7.1
2391 Female, age 94, left hemisphere 5.5
1783 Male, age 74, unknown 5.2
1856 Female, age 91, right hemisphere 4.7
2824 Male, age 61, right hemisphere 0.4
Nucleus basalis of Meynert
nTPM: 12.8
2821 Male, age 75, both hemispheres 17.8
2393 Male, age 80, right hemisphere 14.5
2484 Female, age 94, left hemisphere 10.5
2569 Male, age 61, both hemispheres 8.4
Nucleus of the diagonal band
nTPM: 5.6
1812 Female, age 91, both hemispheres 10.2
1979 Male, age 74, unknown 8.5
2775 Male, age 80, right hemisphere 5.9
2195 Female, age 85, both hemispheres 2.5
2029 Male, age 61, right hemisphere 1.0
Putamen
nTPM: 9.5
2482 Female, age 94, left hemisphere 18.0
2489 Female, age 72, unknown 17.6
1937 Female, age 91, right hemisphere 8.2
1838 Male, age 80, right hemisphere 7.5
2647 Male, age 75, left hemisphere 7.2
1829 Male, age 74, unknown 4.5
2466 Female, age 79, unknown 3.3
Septal nuclei
nTPM: 9.4
2199 Male, age 80, right hemisphere 21.4
2629 Female, age 94, right hemisphere 12.1
2394 Male, age 61, left hemisphere 10.6
2059 Female, age 85, both hemispheres 6.8
2009 Female, age 91, both hemispheres 6.6
2031 Female, age 72, unknown 5.9
1960 Male, age 74, unknown 2.5
Stria terminalis, bed nucleus
nTPM: 3.9
1974 Female, age 91, both hemispheres 5.2
2201 Male, age 74, unknown 4.4
2486 Female, age 94, both hemispheres 2.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 41.9
Samples: 246

Max nTPM: 195.4
Min nTPM: 6.3
Std nTPM: 27.0
Median nTPM: 34.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 195.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 186.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 141.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 132.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 128.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 121.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 110.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 108.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 107.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 102.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 101.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 95.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 91.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 90.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 89.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 89.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 88.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 86.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 83.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 79.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 77.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 77.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 75.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 75.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 70.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 67.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 67.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 67.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 66.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 66.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 64.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 64.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 64.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 64.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 62.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 62.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 61.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 61.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 60.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 60.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 59.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 59.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 59.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 58.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 58.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 58.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 57.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 57.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 56.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 56.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 55.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 55.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 55.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 54.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 54.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 54.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 54.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 53.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 53.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 53.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 53.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 53.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 52.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 51.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 51.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 51.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 51.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 50.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 50.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 48.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 48.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 47.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 47.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 46.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 46.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 46.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 46.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 46.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 45.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 45.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 45.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 44.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 44.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 44.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 44.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 44.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 44.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 43.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 43.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 43.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 43.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 42.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 42.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 41.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 41.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 41.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 41.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 41.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 40.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 40.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 40.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 39.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 39.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 38.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 38.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 37.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 37.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 37.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 37.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 36.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 36.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 36.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 35.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 35.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 35.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 35.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 35.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 35.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 35.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 35.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 34.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 34.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 34.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 34.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 34.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 33.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 33.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 33.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 33.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 33.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 33.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 32.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 32.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 32.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 31.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 31.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 31.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 31.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 30.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 30.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 30.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 30.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 30.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 30.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 29.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 29.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 29.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 29.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 29.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 29.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 29.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 28.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 28.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 28.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 28.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 27.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 27.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 27.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 27.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 27.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 27.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 27.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 27.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 27.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 27.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 27.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 27.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 26.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 26.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 26.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 26.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 26.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 25.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 25.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 25.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 25.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 24.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 24.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 24.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 24.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 24.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 24.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 24.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 23.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 23.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 23.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 23.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 23.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 23.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 23.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 22.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 22.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 22.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 22.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 22.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 22.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 21.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 21.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 21.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 21.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 21.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 21.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 20.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 20.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 20.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 20.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 20.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 20.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 20.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 20.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 20.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 20.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 19.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 19.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 19.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 19.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 19.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 18.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 18.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 18.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 18.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 18.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 18.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 18.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 17.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 17.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 17.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 17.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 17.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 17.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 17.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 17.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 17.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 16.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 16.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 16.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 15.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 15.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 14.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 14.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 14.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 14.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 13.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 12.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 11.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 6.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 36.1
Samples: 246

Max nTPM: 466.4
Min nTPM: 9.7
Std nTPM: 38.3
Median nTPM: 26.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 466.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 295.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 143.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 121.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 116.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 114.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 102.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 102.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 91.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 89.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 88.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 80.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 75.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 74.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 71.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 71.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 67.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 67.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 63.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 63.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 63.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 63.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 61.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 60.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 59.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 59.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 59.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 56.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 56.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 55.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 54.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 54.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 54.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 53.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 52.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 52.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 52.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 51.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 50.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 50.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 48.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 48.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 47.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 47.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 47.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 47.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 47.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 47.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 45.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 44.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 44.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 44.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 44.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 43.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 43.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 43.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 43.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 42.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 42.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 41.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 41.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 41.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 41.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 41.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 41.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 41.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 41.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 41.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 40.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 39.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 39.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 38.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 38.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 38.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 37.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 37.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 37.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 37.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 37.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 37.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 37.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 36.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 36.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 36.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 36.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 36.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 35.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 35.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 35.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 34.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 34.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 34.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 33.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 33.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 33.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 33.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 32.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 32.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 32.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 31.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 31.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 31.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 30.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 30.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 30.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 29.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 29.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 29.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 29.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 29.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 28.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 28.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 28.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 28.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 28.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 28.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 27.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 27.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 27.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 27.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 26.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 26.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 26.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 25.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 25.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 25.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 25.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 25.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 25.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 25.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 25.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 25.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 25.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 24.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 24.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 24.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 24.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 24.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 24.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 23.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 23.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 23.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 23.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 23.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 23.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 23.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 23.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 22.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 22.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 22.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 22.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 22.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 22.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 22.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 22.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 22.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 22.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 21.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 21.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 21.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 21.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 20.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 20.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 20.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 20.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 20.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 20.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 20.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 20.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 20.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 20.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 20.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 20.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 20.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 20.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 19.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 19.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 19.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 19.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 19.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 19.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 19.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 19.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 19.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 19.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 19.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 19.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 19.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 18.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 18.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 18.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 18.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 18.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 18.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 18.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 18.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 18.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 17.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 17.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 17.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 17.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 17.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 17.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 17.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 17.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 17.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 17.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 16.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 16.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 16.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 16.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 16.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 16.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 16.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 15.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 15.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 15.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 15.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 15.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 15.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 15.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 15.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 15.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 15.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 15.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 14.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 14.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 14.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 14.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 14.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 14.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 14.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 14.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 13.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 13.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 13.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 12.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 12.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 12.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 12.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 11.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 11.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 11.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 10.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 10.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 9.7
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Brain - Putamen (basal ganglia)
Average nTPM: 42.0
Samples: 205

Max nTPM: 273.7
Min nTPM: 8.3
Std nTPM: 31.7
Median nTPM: 33.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 273.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 218.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 170.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 155.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 150.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 134.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 121.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 119.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 108.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 91.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 89.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 88.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 74.7
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 73.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 73.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 72.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 72.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 71.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 69.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 66.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 66.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 65.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 65.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 63.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 63.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 63.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 63.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 62.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 61.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 60.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 58.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 56.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 56.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 53.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 53.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 52.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 52.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 52.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 51.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 51.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 50.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 50.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 49.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 49.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 48.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 47.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 47.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 47.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 47.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 46.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 46.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 46.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 46.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 46.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 45.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 45.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 45.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 45.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 45.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 44.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 43.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 43.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 43.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 43.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 42.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 42.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 42.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 42.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 42.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 42.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 42.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 42.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 42.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 41.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 41.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 41.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 41.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 40.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 40.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 40.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 40.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 39.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 39.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 39.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 39.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 39.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 38.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 38.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 38.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 38.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 38.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 37.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 37.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 36.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 36.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 36.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 36.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 35.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 35.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 34.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 34.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 34.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 33.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 33.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 33.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 33.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 33.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 33.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 33.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 33.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 32.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 32.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 32.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 32.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 32.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 32.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 32.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 31.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 31.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 31.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 31.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 31.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 30.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 30.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 30.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 30.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 30.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 29.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 29.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 29.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 28.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 28.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 28.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 28.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 28.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 28.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 27.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 27.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 27.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 27.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 27.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 26.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 26.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 26.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 26.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 26.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 25.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 25.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 25.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 25.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 24.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 24.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 24.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 24.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 24.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 23.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 23.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 23.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 23.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 23.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 23.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 22.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 22.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 22.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 22.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 22.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 22.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 22.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 22.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 22.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 21.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 21.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 21.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 21.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 21.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 21.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 21.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 20.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 20.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 20.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 20.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 19.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 19.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 19.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 19.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 18.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 18.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 18.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 18.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 17.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 17.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 17.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 17.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 17.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 16.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 16.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 16.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 16.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 15.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 15.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 15.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 14.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 14.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 12.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 8.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

144.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 144.8
FF:10164-103B2 76 years, female 144.8
Nucleus accumbens
Scaled Tags Per Million: 116.3
FF:10037-101F1 23-56 years, mixed 116.3
Putamen
Scaled Tags Per Million: 61.8
FF:10176-103C5 60 years, female 61.8
Globus pallidus
Scaled Tags Per Million: 141.6
FF:10175-103C4 60 years, female 156.1
FF:10161-103A8 76 years, female 127.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.6
Pig sample Sample description nTPM
Caudate
nTPM: 24.1
Samples: 4

Max nTPM: 26.9
Min nTPM: 17.0
Sample A Female 25.7
Sample B Female 26.8
Sample C Male 26.9
Sample D Male 17.0
Putamen
nTPM: 21.5
Samples: 4

Max nTPM: 31.7
Min nTPM: 17.4
Sample A Female 31.7
Sample B Female 17.4
Sample C Male 17.8
Sample D Male 19.2
Septum
nTPM: 36.6
Samples: 4

Max nTPM: 48.7
Min nTPM: 28.8
Sample A Female 35.6
Sample B Female 28.8
Sample C Male 48.7
Sample D Male 33.2
Ventral pallidum
nTPM: 24.3
Samples: 4

Max nTPM: 28.9
Min nTPM: 19.7
Sample A Female 21.3
Sample B Female 27.3
Sample C Male 28.9
Sample D Male 19.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 4.9
Samples: 4

Max nTPM: 5.4
Min nTPM: 4.0
Sample A Male 5.3
Sample B Male 4.8
Sample C Female 5.4
Sample D Female 4.0
Septum
nTPM: 9.6
Samples: 4

Max nTPM: 13.6
Min nTPM: 5.9
Sample A Male 13.6
Sample B Male 9.2
Sample C Female 9.6
Sample D Female 5.9
Ventral forebrain
nTPM: 20.6
Samples: 4

Max nTPM: 29.0
Min nTPM: 13.3
Sample A Male 15.6
Sample B Male 24.4
Sample C Female 29.0
Sample D Female 13.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.2
68076550 Antisense, RP_040923_02_F11, Mouse strain C57BL/6J (56 days, male) 0.2
Pallidum
Expression energy: 0.1
68076550 Antisense, RP_040923_02_F11, Mouse strain C57BL/6J (56 days, male) 0.1

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