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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:38.4 nTPM
HPA Brain:37.4 nTPM
GTEx:38.4 nTPM
FANTOM5:36.1 Scaled Tags Per Million
Pig:46.0 nTPM
Mouse:67.4 nTPM
Allen mouse:5.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002697
Glial cells Not detected
Neuronal cells Not detected


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 35.5
2846 Female, age 79, unknown 38.4
2481 Female, age 94, left hemisphere 37.9
1857 Female, age 85, left hemisphere 36.1
1854 Male, age 80, left hemisphere 35.4
2288 Male, age 75, left hemisphere 35.0
2290 Female, age 72, unknown 34.7
1781 Male, age 74, unknown 33.9
2289 Male, age 61, right hemisphere 33.0
Globus pallidus, externus
nTPM: 35.4
2646 Male, age 61, right hemisphere 37.8
1996 Male, age 80, right hemisphere 37.1
2772 Female, age 79, unknown 35.9
2395 Male, age 75, both hemispheres 35.7
2567 Female, age 72, unknown 30.3
Globus pallidus, internus
nTPM: 35.8
2287 Male, age 75, right hemisphere 43.6
2483 Female, age 94, right hemisphere 42.2
2778 Female, age 91, both hemispheres 35.4
2037 Male, age 80, right hemisphere 33.7
1818 Male, age 74, unknown 33.6
2566 Female, age 72, unknown 32.8
2111 Female, age 85, right hemisphere 29.5
Nucleus accumbens
nTPM: 35.1
2698 Female, age 72, unknown 38.5
1856 Female, age 91, right hemisphere 38.0
1806 Female, age 85, left hemisphere 36.8
1783 Male, age 74, unknown 36.3
2286 Male, age 75, left hemisphere 35.0
2732 Male, age 80, right hemisphere 33.3
2391 Female, age 94, left hemisphere 33.1
2824 Male, age 61, right hemisphere 29.8
Nucleus basalis of Meynert
nTPM: 34.9
2569 Male, age 61, both hemispheres 37.7
2821 Male, age 75, both hemispheres 36.0
2484 Female, age 94, left hemisphere 33.5
2393 Male, age 80, right hemisphere 32.3
Nucleus of the diagonal band
nTPM: 37.4
1812 Female, age 91, both hemispheres 42.5
2775 Male, age 80, right hemisphere 38.3
2195 Female, age 85, both hemispheres 37.3
1979 Male, age 74, unknown 37.0
2029 Male, age 61, right hemisphere 32.1
Putamen
nTPM: 35.2
1838 Male, age 80, right hemisphere 36.9
2482 Female, age 94, left hemisphere 36.4
1829 Male, age 74, unknown 35.7
2466 Female, age 79, unknown 34.9
2647 Male, age 75, left hemisphere 34.8
2489 Female, age 72, unknown 34.1
1937 Female, age 91, right hemisphere 33.9
Septal nuclei
nTPM: 36.6
1960 Male, age 74, unknown 42.4
2031 Female, age 72, unknown 41.7
2009 Female, age 91, both hemispheres 37.6
2629 Female, age 94, right hemisphere 35.4
2199 Male, age 80, right hemisphere 34.5
2059 Female, age 85, both hemispheres 34.4
2394 Male, age 61, left hemisphere 30.0
Stria terminalis, bed nucleus
nTPM: 34.4
1974 Female, age 91, both hemispheres 35.9
2201 Male, age 74, unknown 34.6
2486 Female, age 94, both hemispheres 32.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

38.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 37.8
Samples: 246

Max nTPM: 51.8
Min nTPM: 28.3
Std nTPM: 4.2
Median nTPM: 37.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 51.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 51.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 48.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 48.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 48.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 47.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 46.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 46.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 46.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 46.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 46.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 46.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 45.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 45.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 44.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 44.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 44.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 44.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 44.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 43.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 43.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 43.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 43.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 43.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 43.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 43.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 43.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 42.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 42.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 42.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 42.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 42.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 42.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 42.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 42.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 41.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 41.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 41.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 41.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 41.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 41.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 41.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 41.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 41.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 41.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 41.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 41.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 40.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 40.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 40.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 40.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 40.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 40.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 40.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 40.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 40.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 40.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 40.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 40.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 40.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 40.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 40.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 40.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 40.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 40.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 40.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 40.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 40.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 40.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 40.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 39.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 39.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 39.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 39.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 39.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 39.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 39.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 39.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 39.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 39.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 39.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 39.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 39.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 39.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 39.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 39.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 39.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 39.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 39.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 39.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 39.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 39.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 39.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 39.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 39.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 39.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 39.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 38.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 38.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 38.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 38.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 38.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 38.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 38.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 38.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 38.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 38.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 38.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 38.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 38.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 38.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 38.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 38.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 38.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 38.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 38.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 38.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 38.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 38.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 38.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 38.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 38.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 37.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 37.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 37.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 37.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 37.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 37.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 37.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 37.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 37.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 37.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 37.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 37.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 37.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 37.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 37.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 37.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 37.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 37.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 37.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 37.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 37.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 36.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 36.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 36.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 36.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 36.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 36.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 36.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 36.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 36.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 36.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 36.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 36.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 36.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 36.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 36.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 36.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 35.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 35.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 35.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 35.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 35.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 35.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 35.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 35.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 35.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 35.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 35.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 35.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 35.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 35.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 35.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 35.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 35.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 35.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 34.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 34.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 34.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 34.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 34.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 34.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 34.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 34.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 34.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 34.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 34.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 34.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 34.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 34.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 34.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 34.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 34.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 34.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 34.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 34.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 34.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 34.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 33.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 33.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 33.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 33.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 33.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 33.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 33.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 33.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 33.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 33.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 33.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 33.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 33.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 33.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 33.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 33.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 32.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 32.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 32.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 32.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 32.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 32.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 32.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 32.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 32.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 32.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 32.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 32.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 31.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 31.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 31.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 31.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 31.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 31.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 31.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 31.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 30.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 30.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 30.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 30.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 30.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 30.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 29.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 29.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 28.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 28.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 28.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 38.4
Samples: 246

Max nTPM: 52.2
Min nTPM: 27.0
Std nTPM: 4.8
Median nTPM: 38.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 52.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 50.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 50.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 49.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 49.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 48.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 48.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 48.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 48.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 48.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 47.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 47.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 47.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 46.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 46.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 46.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 46.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 46.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 45.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 45.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 45.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 45.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 44.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 44.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 44.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 44.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 44.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 44.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 44.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 44.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 44.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 44.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 44.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 43.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 43.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 43.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 43.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 43.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 43.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 43.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 43.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 43.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 43.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 43.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 43.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 42.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 42.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 42.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 42.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 42.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 42.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 42.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 42.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 42.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 41.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 41.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 41.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 41.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 41.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 41.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 41.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 41.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 41.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 41.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 41.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 41.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 41.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 41.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 40.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 40.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 40.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 40.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 40.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 40.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 40.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 40.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 40.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 40.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 40.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 40.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 40.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 40.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 40.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 40.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 40.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 40.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 40.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 40.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 40.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 40.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 39.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 39.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 39.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 39.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 39.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 39.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 39.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 39.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 39.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 39.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 39.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 39.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 39.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 39.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 39.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 39.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 38.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 38.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 38.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 38.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 38.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 38.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 38.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 38.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 38.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 38.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 38.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 38.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 38.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 38.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 38.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 38.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 38.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 38.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 38.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 38.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 37.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 37.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 37.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 37.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 37.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 37.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 37.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 37.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 37.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 37.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 37.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 37.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 37.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 37.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 37.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 37.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 37.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 37.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 37.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 37.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 37.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 37.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 36.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 36.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 36.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 36.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 36.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 36.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 36.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 36.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 36.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 36.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 36.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 36.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 36.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 36.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 36.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 36.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 36.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 35.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 35.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 35.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 35.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 35.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 35.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 35.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 35.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 35.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 35.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 35.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 35.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 35.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 35.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 35.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 35.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 35.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 35.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 35.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 35.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 35.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 35.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 34.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 34.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 34.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 34.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 34.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 34.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 34.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 34.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 34.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 34.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 34.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 34.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 34.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 34.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 34.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 34.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 33.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 33.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 33.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 33.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 33.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 33.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 33.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 33.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 33.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 33.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 32.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 32.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 32.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 32.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 32.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 32.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 32.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 32.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 32.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 32.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 32.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 31.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 31.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 31.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 31.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 31.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 31.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 31.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 31.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 31.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 31.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 30.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 30.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 30.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 30.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 30.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 29.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 29.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 29.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 29.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 27.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 27.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 27.0
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Brain - Putamen (basal ganglia)
Average nTPM: 37.8
Samples: 205

Max nTPM: 51.7
Min nTPM: 27.3
Std nTPM: 4.5
Median nTPM: 37.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 51.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 50.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 48.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 48.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 48.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 48.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 48.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 47.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 46.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 46.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 45.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 45.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 45.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 45.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 45.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 45.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 45.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 44.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 44.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 44.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 44.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 44.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 43.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 43.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 43.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 43.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 43.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 42.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 42.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 42.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 42.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 42.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 42.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 42.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 42.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 41.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 41.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 41.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 41.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 40.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 40.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 40.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 40.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 40.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 40.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 40.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 40.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 40.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 40.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 40.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 40.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 40.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 40.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 40.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 40.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 40.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 40.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 40.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 39.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 39.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 39.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 39.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 39.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 39.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 39.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 39.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 39.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 39.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 39.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 39.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 39.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 39.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 39.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 39.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 39.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 39.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 39.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 39.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 39.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 39.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 39.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 39.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 39.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 38.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 38.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 38.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 38.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 38.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 38.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 38.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 38.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 38.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 38.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 38.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 38.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 38.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 37.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 37.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 37.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 37.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 37.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 37.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 37.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 37.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 37.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 37.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 37.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 37.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 37.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 37.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 37.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 37.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 36.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 36.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 36.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 36.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 36.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 36.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 36.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 36.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 36.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 36.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 36.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 36.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 36.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 36.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 36.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 36.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 36.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 36.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 36.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 36.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 36.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 35.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 35.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 35.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 35.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 35.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 35.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 35.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 35.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 35.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 35.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 35.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 35.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 35.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 34.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 34.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 34.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 34.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 34.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 34.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 34.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 34.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 34.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 34.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 34.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 34.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 34.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 34.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 34.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 34.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 34.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 34.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 33.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 33.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 33.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 33.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 33.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 33.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 33.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 33.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 33.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 33.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 32.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 32.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 32.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 32.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 32.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 32.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 32.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 32.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 32.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 32.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 32.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 32.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 32.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 31.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 31.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 31.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 31.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 31.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 31.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 31.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 31.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 31.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 31.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 31.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 30.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 30.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 30.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 29.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 29.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 28.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 27.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

36.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 36.1
FF:10164-103B2 76 years, female 36.1
Nucleus accumbens
Scaled Tags Per Million: 24.4
FF:10037-101F1 23-56 years, mixed 24.4
Putamen
Scaled Tags Per Million: 34.1
FF:10176-103C5 60 years, female 34.1
Globus pallidus
Scaled Tags Per Million: 26.8
FF:10161-103A8 76 years, female 34.8
FF:10175-103C4 60 years, female 18.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.0
Pig sample Sample description nTPM
Caudate
nTPM: 44.0
Samples: 4

Max nTPM: 52.5
Min nTPM: 37.2
Sample A Female 37.2
Sample B Female 44.9
Sample C Male 52.5
Sample D Male 41.4
Putamen
nTPM: 46.0
Samples: 4

Max nTPM: 54.6
Min nTPM: 37.2
Sample A Female 37.2
Sample B Female 42.6
Sample C Male 54.6
Sample D Male 49.5
Septum
nTPM: 41.3
Samples: 4

Max nTPM: 42.9
Min nTPM: 40.2
Sample A Female 42.9
Sample B Female 41.7
Sample C Male 40.5
Sample D Male 40.2
Ventral pallidum
nTPM: 42.6
Samples: 4

Max nTPM: 45.4
Min nTPM: 38.2
Sample A Female 38.2
Sample B Female 45.4
Sample C Male 42.5
Sample D Male 44.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 67.4
Samples: 4

Max nTPM: 69.4
Min nTPM: 65.1
Sample A Male 69.3
Sample B Male 65.1
Sample C Female 65.8
Sample D Female 69.4
Septum
nTPM: 62.2
Samples: 4

Max nTPM: 63.5
Min nTPM: 59.4
Sample A Male 63.4
Sample B Male 62.3
Sample C Female 59.4
Sample D Female 63.5
Ventral forebrain
nTPM: 65.6
Samples: 4

Max nTPM: 67.9
Min nTPM: 59.8
Sample A Male 67.6
Sample B Male 67.9
Sample C Female 59.8
Sample D Female 67.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.4
74819346 Antisense, RP_060315_02_F01, Mouse strain C57BL/6J (56 days, male) 6.0
69838048 Antisense, RP_050224_01_H02, Mouse strain C57BL/6J (56 days, male) 4.8
Pallidum
Expression energy: 4.6
74819346 Antisense, RP_060315_02_F01, Mouse strain C57BL/6J (56 days, male) 4.7
69838048 Antisense, RP_050224_01_H02, Mouse strain C57BL/6J (56 days, male) 4.5

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