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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:33.3 nTPM
HPA Brain:30.9 nTPM
GTEx:33.3 nTPM
FANTOM5:26.2 Scaled Tags Per Million
Pig:16.7 nTPM
Mouse:29.0 nTPM
Allen mouse:0.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA029198Antibody CAB004441
Glial cells LowNot detected
Neuronal cells LowNot detected




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 29.5
1781 Male, age 74, unknown 81.0
2289 Male, age 61, right hemisphere 41.1
2481 Female, age 94, left hemisphere 30.1
1854 Male, age 80, left hemisphere 20.1
2290 Female, age 72, unknown 18.9
2846 Female, age 79, unknown 17.7
1857 Female, age 85, left hemisphere 17.6
2288 Male, age 75, left hemisphere 9.1
Globus pallidus, externus
nTPM: 30.9
2646 Male, age 61, right hemisphere 50.8
2772 Female, age 79, unknown 28.8
1996 Male, age 80, right hemisphere 28.7
2567 Female, age 72, unknown 27.1
2395 Male, age 75, both hemispheres 19.2
Globus pallidus, internus
nTPM: 22.9
2483 Female, age 94, right hemisphere 31.2
2037 Male, age 80, right hemisphere 25.2
2566 Female, age 72, unknown 22.3
2778 Female, age 91, both hemispheres 22.1
2287 Male, age 75, right hemisphere 21.7
2111 Female, age 85, right hemisphere 19.2
1818 Male, age 74, unknown 18.8
Nucleus accumbens
nTPM: 15.9
2391 Female, age 94, left hemisphere 23.2
1783 Male, age 74, unknown 22.4
2732 Male, age 80, right hemisphere 21.5
1806 Female, age 85, left hemisphere 16.3
2698 Female, age 72, unknown 14.2
2286 Male, age 75, left hemisphere 11.5
1856 Female, age 91, right hemisphere 10.8
2824 Male, age 61, right hemisphere 7.5
Nucleus basalis of Meynert
nTPM: 26.3
2569 Male, age 61, both hemispheres 46.9
2484 Female, age 94, left hemisphere 22.2
2393 Male, age 80, right hemisphere 18.3
2821 Male, age 75, both hemispheres 17.9
Nucleus of the diagonal band
nTPM: 14.6
1812 Female, age 91, both hemispheres 28.7
1979 Male, age 74, unknown 16.5
2775 Male, age 80, right hemisphere 12.4
2195 Female, age 85, both hemispheres 11.5
2029 Male, age 61, right hemisphere 4.1
Putamen
nTPM: 17.3
2489 Female, age 72, unknown 24.5
2482 Female, age 94, left hemisphere 20.9
2466 Female, age 79, unknown 19.4
1838 Male, age 80, right hemisphere 15.9
2647 Male, age 75, left hemisphere 14.6
1829 Male, age 74, unknown 13.7
1937 Female, age 91, right hemisphere 12.3
Septal nuclei
nTPM: 23.4
2199 Male, age 80, right hemisphere 49.3
2009 Female, age 91, both hemispheres 35.5
2059 Female, age 85, both hemispheres 18.4
2031 Female, age 72, unknown 18.1
2394 Male, age 61, left hemisphere 17.5
2629 Female, age 94, right hemisphere 14.7
1960 Male, age 74, unknown 10.1
Stria terminalis, bed nucleus
nTPM: 12.5
2201 Male, age 74, unknown 13.2
2486 Female, age 94, both hemispheres 12.5
1974 Female, age 91, both hemispheres 11.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 33.3
Samples: 246

Max nTPM: 1031.5
Min nTPM: 2.8
Std nTPM: 76.2
Median nTPM: 14.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1031.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 284.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 256.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 206.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 204.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 202.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 169.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 161.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 154.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 150.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 143.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 141.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 140.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 134.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 110.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 106.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 94.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 88.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 85.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 78.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 77.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 76.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 75.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 68.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 66.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 64.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 61.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 58.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 57.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 54.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 53.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 52.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 49.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 47.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 46.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 45.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 44.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 43.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 42.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 42.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 41.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 40.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 40.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 40.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 39.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 39.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 38.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 38.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 36.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 36.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 35.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 34.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 34.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 34.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 34.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 32.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 31.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 31.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 31.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 31.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 30.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 29.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 29.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 29.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 28.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 27.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 27.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 26.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 26.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 26.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 25.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 24.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 24.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 24.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 24.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 24.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 24.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 23.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 23.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 23.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 23.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 23.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 22.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 22.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 22.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 22.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 22.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 20.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 20.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 19.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 19.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 19.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 19.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 18.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 18.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 18.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 18.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 18.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 18.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 18.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 18.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 17.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 17.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 17.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 17.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 16.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 16.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 15.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 15.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 15.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 15.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 15.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 15.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 15.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 15.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 15.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 15.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 15.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 14.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 14.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 14.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 14.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 14.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 14.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 14.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 14.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 13.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 13.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 13.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 13.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 13.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 13.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 13.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 13.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 13.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 12.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 12.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 12.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 12.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 12.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 12.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 12.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 12.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 12.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 12.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 12.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 12.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 11.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 11.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 11.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 11.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 11.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 11.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 11.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 11.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 11.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 11.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 10.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 10.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 10.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 10.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 10.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 10.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 10.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 9.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 9.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 9.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 9.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 9.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 9.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 9.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 9.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 9.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 9.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 9.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 9.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 9.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 9.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 9.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 9.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 9.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 8.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 8.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 8.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 8.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 8.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 8.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 8.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 8.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 8.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 8.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 8.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 8.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 8.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 8.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 8.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 7.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 7.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 7.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 7.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 7.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 7.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 7.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 7.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 7.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 7.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 7.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 7.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 7.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 6.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 6.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 6.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 6.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 6.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 6.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 6.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 6.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 6.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 6.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 6.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 6.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 6.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 6.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 6.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 6.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 5.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 5.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 5.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 5.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 5.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 5.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 5.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 5.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 4.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 4.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 4.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 4.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 4.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 4.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 4.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 3.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 3.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 3.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 3.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 3.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 2.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 29.6
Samples: 246

Max nTPM: 467.1
Min nTPM: 3.0
Std nTPM: 60.7
Median nTPM: 10.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 467.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 387.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 355.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 327.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 290.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 289.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 219.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 196.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 178.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 158.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 139.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 134.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 131.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 117.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 105.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 95.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 95.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 90.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 86.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 75.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 75.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 73.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 70.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 68.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 66.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 59.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 53.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 53.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 49.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 48.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 48.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 46.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 45.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 39.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 38.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 37.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 36.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 35.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 35.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 35.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 34.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 31.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 31.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 30.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 29.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 28.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 28.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 27.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 26.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 26.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 26.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 25.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 25.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 24.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 24.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 24.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 23.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 23.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 23.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 22.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 21.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 20.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 20.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 20.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 20.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 20.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 20.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 19.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 19.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 19.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 18.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 18.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 18.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 17.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 17.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 17.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 17.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 16.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 16.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 16.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 16.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 16.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 16.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 16.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 15.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 15.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 15.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 14.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 14.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 14.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 14.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 14.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 14.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 13.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 13.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 13.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 13.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 13.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 13.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 13.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 13.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 13.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 13.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 13.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 13.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 12.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 12.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 12.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 11.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 11.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 11.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 11.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 11.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 11.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 11.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 11.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 11.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 11.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 11.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 11.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 11.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 11.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 11.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 10.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 10.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 10.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 10.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 10.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 10.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 9.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 9.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 9.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 9.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 9.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 9.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 9.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 9.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 9.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 9.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 9.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 9.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 9.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 8.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 8.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 8.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 8.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 8.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 8.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 8.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 8.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 8.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 8.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 8.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 8.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 8.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 8.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 8.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 8.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 8.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 8.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 7.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 7.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 7.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 7.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 7.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 7.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 7.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 7.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 7.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 7.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 7.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 7.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 7.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 7.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 7.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 7.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 7.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 7.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 7.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 7.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 7.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 7.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 7.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 7.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 7.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 7.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 7.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 6.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 6.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 6.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 6.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 6.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 6.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 6.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 6.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 6.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 6.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 6.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 6.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 6.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 6.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 6.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 6.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 6.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 6.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 5.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 5.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 5.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 5.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 5.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 5.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 5.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 5.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 5.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 5.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 5.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 5.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 5.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 5.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 5.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 5.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 4.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 4.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 4.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 4.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 4.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 4.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 4.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 4.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 4.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 4.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 4.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 4.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 4.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 4.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 4.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 4.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 4.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 4.0
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 4.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 3.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 3.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 3.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 3.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 3.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 3.0
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Brain - Putamen (basal ganglia)
Average nTPM: 30.3
Samples: 205

Max nTPM: 265.1
Min nTPM: 4.5
Std nTPM: 43.5
Median nTPM: 15.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 265.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 259.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 241.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 231.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 188.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 174.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 173.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 158.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 142.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 140.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 102.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 101.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 101.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 94.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 94.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 93.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 89.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 84.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 69.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 57.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 57.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 55.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 54.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 50.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 48.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 48.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 47.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 47.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 45.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 44.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 40.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 39.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 38.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 37.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 37.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 36.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 36.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 35.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 35.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 35.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 33.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 32.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 32.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 32.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 32.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 31.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 31.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 29.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 28.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 28.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 28.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 28.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 28.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 28.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 28.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 27.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 27.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 26.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 26.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 26.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 26.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 25.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 25.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 24.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 24.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 24.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 24.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 22.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 22.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 22.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 22.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 22.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 21.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 21.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 21.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 21.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 21.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 21.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 20.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 20.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 20.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 20.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 19.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 19.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 19.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 19.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 18.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 18.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 18.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 18.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 18.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 18.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 18.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 17.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 17.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 17.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 17.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 17.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 16.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 16.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 16.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 16.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 15.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 15.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 15.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 15.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 14.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 14.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 14.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 14.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 14.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 14.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 14.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 14.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 14.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 14.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 13.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 13.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 13.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 13.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 13.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 13.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 13.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 12.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 12.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 12.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 12.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 12.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 12.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 12.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 12.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 12.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 12.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 12.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 12.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 12.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 11.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 11.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 11.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 11.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 11.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 11.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 11.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 10.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 10.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 10.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 10.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 10.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 10.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 10.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 10.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 10.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 10.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 9.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 9.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 9.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 9.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 9.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 9.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 9.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 8.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 8.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 8.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 8.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 8.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 8.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 8.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 8.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 8.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 8.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 8.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 8.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 7.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 7.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 7.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 7.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 7.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 7.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 7.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 7.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 7.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 7.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 7.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 6.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 6.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 6.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 6.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 6.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 6.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 6.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 6.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 6.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 6.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 6.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 5.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 5.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 5.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 5.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 5.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 5.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 5.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 5.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 5.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 5.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 4.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

26.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 26.2
FF:10164-103B2 76 years, female 26.2
Nucleus accumbens
Scaled Tags Per Million: 11.2
FF:10037-101F1 23-56 years, mixed 11.2
Putamen
Scaled Tags Per Million: 10.0
FF:10176-103C5 60 years, female 10.0
Globus pallidus
Scaled Tags Per Million: 24.3
FF:10161-103A8 76 years, female 37.6
FF:10175-103C4 60 years, female 10.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.7
Pig sample Sample description nTPM
Caudate
nTPM: 16.0
Samples: 4

Max nTPM: 17.9
Min nTPM: 14.4
Sample A Female 14.4
Sample B Female 15.3
Sample C Male 16.3
Sample D Male 17.9
Putamen
nTPM: 15.6
Samples: 4

Max nTPM: 18.7
Min nTPM: 10.7
Sample A Female 18.6
Sample B Female 10.7
Sample C Male 14.5
Sample D Male 18.7
Septum
nTPM: 16.7
Samples: 4

Max nTPM: 20.2
Min nTPM: 12.6
Sample A Female 15.1
Sample B Female 12.6
Sample C Male 19.0
Sample D Male 20.2
Ventral pallidum
nTPM: 15.4
Samples: 4

Max nTPM: 18.1
Min nTPM: 12.5
Sample A Female 12.5
Sample B Female 14.4
Sample C Male 18.1
Sample D Male 16.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 19.6
Samples: 4

Max nTPM: 22.7
Min nTPM: 17.7
Sample A Male 17.7
Sample B Male 20.0
Sample C Female 18.0
Sample D Female 22.7
Septum
nTPM: 29.0
Samples: 4

Max nTPM: 35.9
Min nTPM: 25.4
Sample A Male 25.4
Sample B Male 26.6
Sample C Female 35.9
Sample D Female 28.0
Ventral forebrain
nTPM: 26.7
Samples: 4

Max nTPM: 39.1
Min nTPM: 20.6
Sample A Male 20.6
Sample B Male 23.0
Sample C Female 39.1
Sample D Female 24.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.3
69873588 Antisense, RP_050512_01_E11, Mouse strain C57BL/6J (56 days, male) 0.3
Pallidum
Expression energy: 0.1
69873588 Antisense, RP_050512_01_E11, Mouse strain C57BL/6J (56 days, male) 0.1

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