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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
155.8
nTPM
GTEx:
155.8
nTPM
FANTOM5:
39.9
Scaled Tags Per Million
Pig:
46.1
nTPM
Mouse:
107.7
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
155.8
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 155.8
Samples: 105
Max nTPM: 487.8
Min nTPM: 56.5
Std nTPM: 57.9
Median nTPM:
218_1
71 years, female
487.8
379_1
60 years, male
289.2
6_1
73 years, female
284.0
307_1
66 years, female
277.7
447_1
81 years, male
260.2
237_1
82 years, male
254.4
386_1
76 years, male
234.6
322_1
76 years, male
231.5
321_1
62 years, female
230.1
375_1
74 years, female
226.4
354_1
81 years, female
224.1
173_1
67 years, male
214.6
384_1
83 years, male
214.4
350_1
84 years, female
210.3
318_1
68 years, male
209.2
35_1
74 years, female
209.1
495_1
57 years, female
207.5
163_1
78 years, male
196.1
319_1
81 years, male
192.3
145_1
84 years, male
189.9
389_1
86 years, female
189.9
348_1
84 years, male
188.3
377_1
82 years, female
187.7
352_1
62 years, male
183.8
4_1
88 years, female
183.3
452_1
88 years, female
182.3
316_1
62 years, male
181.9
172_1
72 years, female
181.2
189_1
76 years, male
180.6
518_1
75 years, female
178.5
317_1
60 years, male
174.1
335_1
73 years, female
172.0
246_1
77 years, male
171.4
311_1
78 years, male
169.4
353_1
82 years, female
168.7
243_1
75 years, male
166.5
376_1
75 years, female
162.8
320_1
89 years, female
162.0
2_1
77 years, female
161.7
251_1
78 years, male
157.2
153_1
70 years, female
156.3
265_1
87 years, male
154.4
291_1
76 years, male
154.4
126_1
63 years, male
154.3
120_1
70 years, female
152.9
308_1
70 years, female
152.1
394_1
75 years, female
151.9
254_1
77 years, female
151.6
355_1
70 years, female
151.3
293_1
68 years, female
150.9
347_1
72 years, male
150.3
351_1
91 years, male
150.2
17_1
71 years, male
149.7
41_1
94 years, female
149.2
526_1
61 years, male
148.0
503_1
68 years, male
147.7
264_1
73 years, female
145.5
405_1
91 years, male
145.1
425_1
59 years, female
144.8
313_1
79 years, female
144.7
506_1
65 years, male
142.8
349_1
83 years, male
141.3
356_1
87 years, female
138.9
288_1
66 years, female
138.1
217_1
76 years, male
137.6
406_1
79 years, male
134.0
396_1
62 years, male
132.8
117_1
61 years, male
132.4
229_1
69 years, female
132.0
404_1
82 years, female
131.0
517_1
88 years, male
129.9
286_1
68 years, female
128.7
480_1
63 years, male
128.4
177_1
74 years, male
125.7
42_1
85 years, male
125.5
139_1
64 years, female
124.7
468_1
89 years, male
124.1
18_1
88 years, male
123.1
137_1
83 years, male
122.7
324_1
76 years, male
122.0
295_1
61 years, female
120.8
292_1
71 years, male
118.5
9_1
66 years, female
116.9
43_1
64 years, female
114.5
81_1
67 years, male
114.1
115_1
83 years, male
111.9
266_1
85 years, male
111.9
142_1
61 years, female
107.1
314_1
67 years, male
106.9
415_1
77 years, female
105.8
109_1
81 years, female
105.6
162_1
79 years, female
101.1
414_1
84 years, female
98.5
119_1
70 years, female
95.8
499_1
55 years, female
95.7
315_1
62 years, female
95.1
466_1
57 years, female
93.8
491_1
89 years, female
88.6
32_1
67 years, male
85.5
490_1
67 years, female
77.4
99_1
64 years, male
75.7
89_1
63 years, male
68.1
501_1
88 years, male
65.3
149_1
88 years, male
59.8
413_1
59 years, female
56.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
