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DSN1
HPA
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  • DSN1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

DSN1
Synonyms C20orf172, dJ469A13.2, hKNL-3, KNL3, MIS13
Gene descriptioni

Full gene name according to HGNC.

DSN1 component of MIS12 kinetochore complex
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 20
Cytoband q11.23
Chromosome location (bp) 36751791 - 36773818
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000149636 (version 109)
Entrez gene 79980
HGNC HGNC:16165
UniProt Q9H410 (UniProt - Evidence at protein level)
neXtProt NX_Q9H410
GeneCards DSN1
Antibodypedia DSN1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Part of the MIS12 complex which is required for normal chromosome alignment and segregation and kinetochore formation during mitosis.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cell cycle, Cell division, Chromosome partition, Mitosis
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a kinetochore protein that functions as part of the minichromosome instability-12 centromere complex. The encoded protein is required for proper kinetochore assembly and progression through the cell cycle. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Feb 2009]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
DSN1-201
ENSP00000362839
ENST00000373734
Q9H410
[Direct mapping] Kinetochore-associated protein DSN1 homolog
Show all
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000070 [mitotic sister chromatid segregation]
GO:0000444 [MIS12/MIND type complex]
GO:0000775 [chromosome, centromeric region]
GO:0000776 [kinetochore]
GO:0001650 [fibrillar center]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005730 [nucleolus]
GO:0005829 [cytosol]
GO:0007049 [cell cycle]
GO:0007059 [chromosome segregation]
GO:0016604 [nuclear body]
GO:0035578 [azurophil granule lumen]
GO:0051301 [cell division]
Show all
249 aa
28 kDa
No 0
DSN1-202
ENSP00000362845
ENST00000373740
Q5JW54
[Direct mapping] Kinetochore-associated protein DSN1 homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000444 [MIS12/MIND type complex]
GO:0000776 [kinetochore]
GO:0001650 [fibrillar center]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005829 [cytosol]
GO:0007059 [chromosome segregation]
GO:0016604 [nuclear body]
GO:0051301 [cell division]
Show all
284 aa
32.2 kDa
No 0
DSN1-203
ENSP00000362855
ENST00000373750
Q9H410
[Direct mapping] Kinetochore-associated protein DSN1 homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000070 [mitotic sister chromatid segregation]
GO:0000444 [MIS12/MIND type complex]
GO:0000775 [chromosome, centromeric region]
GO:0000776 [kinetochore]
GO:0001650 [fibrillar center]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005730 [nucleolus]
GO:0005829 [cytosol]
GO:0007049 [cell cycle]
GO:0007059 [chromosome segregation]
GO:0016604 [nuclear body]
GO:0035578 [azurophil granule lumen]
GO:0051301 [cell division]
Show all
356 aa
40.1 kDa
No 0
DSN1-204
ENSP00000389810
ENST00000426836
Q9H410
[Direct mapping] Kinetochore-associated protein DSN1 homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000070 [mitotic sister chromatid segregation]
GO:0000444 [MIS12/MIND type complex]
GO:0000775 [chromosome, centromeric region]
GO:0000776 [kinetochore]
GO:0001650 [fibrillar center]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005730 [nucleolus]
GO:0005829 [cytosol]
GO:0007049 [cell cycle]
GO:0007059 [chromosome segregation]
GO:0016604 [nuclear body]
GO:0035578 [azurophil granule lumen]
GO:0051301 [cell division]
Show all
356 aa
40.1 kDa
No 0
DSN1-205
ENSP00000395760
ENST00000438549
Q5JW57
[Direct mapping] Kinetochore-associated protein DSN1 homolog
Show all
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000444 [MIS12/MIND type complex]
GO:0007059 [chromosome segregation]
GO:0051301 [cell division]
Show all
141 aa
16.1 kDa
No 0
DSN1-206
ENSP00000399654
ENST00000447406
Q5JW53
[Direct mapping] Kinetochore-associated protein DSN1 homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000444 [MIS12/MIND type complex]
GO:0000776 [kinetochore]
GO:0001650 [fibrillar center]
GO:0005654 [nucleoplasm]
GO:0005730 [nucleolus]
GO:0005829 [cytosol]
GO:0007059 [chromosome segregation]
GO:0016604 [nuclear body]
GO:0051301 [cell division]
Show all
241 aa
27.3 kDa
No 0
DSN1-207
ENSP00000404463
ENST00000448110
Q9H410
[Direct mapping] Kinetochore-associated protein DSN1 homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000070 [mitotic sister chromatid segregation]
GO:0000444 [MIS12/MIND type complex]
GO:0000775 [chromosome, centromeric region]
GO:0000776 [kinetochore]
GO:0001650 [fibrillar center]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005730 [nucleolus]
GO:0005829 [cytosol]
GO:0007049 [cell cycle]
GO:0007059 [chromosome segregation]
GO:0016604 [nuclear body]
GO:0035578 [azurophil granule lumen]
GO:0051301 [cell division]
Show all
340 aa
38.3 kDa
No 0

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