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LSM14B
HPA
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  • LSM14B
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

LSM14B
Synonyms bA11M20.3, C20orf40, FAM61B, FLJ25473, FT005, LSM13, RAP55B
Gene descriptioni

Full gene name according to HGNC.

LSM family member 14B
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 20
Cytoband q13.33
Chromosome location (bp) 62122461 - 62135374
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000149657 (version 109)
Entrez gene 149986
HGNC HGNC:15887
UniProt Q9BX40 (UniProt - Evidence at protein level)
neXtProt NX_Q9BX40
GeneCards LSM14B
Antibodypedia LSM14B antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Required for oocyte meiotic maturation. May be involved in the storage of translationally inactive mRNAs and protect them from degradation (By similarity). Plays a role in control of mRNA translation (By similarity).... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Developmental protein, Ribonucleoprotein
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Translation regulation
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables RNA binding activity. Predicted to be involved in regulation of translation. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
LSM14B-201
ENSP00000279068
ENST00000279068
Q9BX40
[Direct mapping] Protein LSM14 homolog B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0003729 [mRNA binding]
GO:0005515 [protein binding]
GO:0006417 [regulation of translation]
GO:1990904 [ribonucleoprotein complex]
Show all
385 aa
42.1 kDa
No 0
LSM14B-202
ENSP00000279069
ENST00000279069
Q5TBQ1
[Direct mapping] Protein LSM14 homolog B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
223 aa
23.8 kDa
No 0
LSM14B-203
ENSP00000355209
ENST00000361670
Q5TBP9
[Direct mapping] Protein LSM14 homolog B
Show all
   Phobius predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
248 aa
26.7 kDa
No 0
LSM14B-204
ENSP00000359953
ENST00000370915
A0A0C4DFV2
[Direct mapping] Protein LSM14 homolog B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
221 aa
23.3 kDa
No 0
LSM14B-205
ENSP00000383172
ENST00000400318
Q5TBQ0
[Direct mapping] Protein LSM14 homolog B
Show all
   SCAMPI predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
296 aa
32.1 kDa
No 0

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