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FERMT3
HPA
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  • FERMT3
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

FERMT3
Synonyms KIND3, MGC10966, MIG2B, UNC112C, URP2
Gene descriptioni

Full gene name according to HGNC.

FERM domain containing kindlin 3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 11
Cytoband q13.1
Chromosome location (bp) 64205926 - 64223896
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

15
Ensembl ENSG00000149781 (version 109)
Entrez gene 83706
HGNC HGNC:23151
UniProt Q86UX7 (UniProt - Evidence at protein level)
neXtProt NX_Q86UX7
GeneCards FERMT3
Antibodypedia FERMT3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Plays a central role in cell adhesion in hematopoietic cells 1, 2. Acts by activating the integrin beta-1-3 (ITGB1, ITGB2 and ITGB3) (By similarity). Required for integrin-mediated platelet adhesion and leukocyte adhesion to endothelial cells 3. Required for activation of integrin beta-2 (ITGB2) in polymorphonuclear granulocytes (PMNs) (By similarity).... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cell adhesion
Gene summary (Entrez)i

Useful information about the gene from Entrez

Kindlins are a small family of proteins that mediate protein-protein interactions involved in integrin activation and thereby have a role in cell adhesion, migration, differentiation, and proliferation. The protein encoded by this gene has a key role in the regulation of hemostasis and thrombosis. This protein may also help maintain the membrane skeleton of erythrocytes. Mutations in this gene cause the autosomal recessive leukocyte adhesion deficiency syndrome-III (LAD-III). Alternative splicing results in multiple transcript variants encoding distinct isoforms. [provided by RefSeq, Jan 2010]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
FERMT3-201
ENSP00000279227
ENST00000279227
Q86UX7
[Direct mapping] Fermitin family homolog 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002102 [podosome]
GO:0005178 [integrin binding]
GO:0005576 [extracellular region]
GO:0007155 [cell adhesion]
GO:0007159 [leukocyte cell-cell adhesion]
GO:0007160 [cell-matrix adhesion]
GO:0007229 [integrin-mediated signaling pathway]
GO:0008289 [lipid binding]
GO:0016020 [membrane]
GO:0030055 [cell-substrate junction]
GO:0030335 [positive regulation of cell migration]
GO:0031093 [platelet alpha granule lumen]
GO:0033622 [integrin activation]
GO:0033632 [regulation of cell-cell adhesion mediated by integrin]
GO:0034446 [substrate adhesion-dependent cell spreading]
GO:0042995 [cell projection]
GO:0070062 [extracellular exosome]
GO:0070161 [anchoring junction]
GO:0070527 [platelet aggregation]
Show all
667 aa
76 kDa
No 0
FERMT3-202
ENSP00000339950
ENST00000345728
Q86UX7
[Direct mapping] Fermitin family homolog 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0002102 [podosome]
GO:0005178 [integrin binding]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0007155 [cell adhesion]
GO:0007159 [leukocyte cell-cell adhesion]
GO:0007160 [cell-matrix adhesion]
GO:0007229 [integrin-mediated signaling pathway]
GO:0008289 [lipid binding]
GO:0016020 [membrane]
GO:0030055 [cell-substrate junction]
GO:0030335 [positive regulation of cell migration]
GO:0031093 [platelet alpha granule lumen]
GO:0033622 [integrin activation]
GO:0033632 [regulation of cell-cell adhesion mediated by integrin]
GO:0034446 [substrate adhesion-dependent cell spreading]
GO:0042995 [cell projection]
GO:0070062 [extracellular exosome]
GO:0070161 [anchoring junction]
GO:0070527 [platelet aggregation]
Show all
663 aa
75.4 kDa
No 0
FERMT3-205
ENSP00000438885
ENST00000541252
F5H3I6
[Direct mapping] Fermitin family homolog 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007229 [integrin-mediated signaling pathway]
Show all
483 aa
54.8 kDa
No 0
FERMT3-207
ENSP00000445778
ENST00000544997
F5H1C6
[Direct mapping] Fermitin family homolog 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007229 [integrin-mediated signaling pathway]
Show all
663 aa
75.4 kDa
No 0
FERMT3-208
ENSP00000440209
ENST00000545896
H0YFT5
[Direct mapping] Fermitin family homolog 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007229 [integrin-mediated signaling pathway]
Show all
130 aa
14.3 kDa
No 0
FERMT3-216
ENSP00000513984
ENST00000698852
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007229 [integrin-mediated signaling pathway]
Show all
663 aa
75.4 kDa
No 0
FERMT3-222
ENSP00000513988
ENST00000698860
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007229 [integrin-mediated signaling pathway]
Show all
667 aa
76 kDa
No 0
FERMT3-223
ENSP00000513989
ENST00000698861
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007229 [integrin-mediated signaling pathway]
Show all
663 aa
75.4 kDa
No 0
FERMT3-225
ENSP00000513991
ENST00000698863
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007229 [integrin-mediated signaling pathway]
Show all
663 aa
75.4 kDa
No 0
FERMT3-227
ENSP00000513992
ENST00000698865
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007229 [integrin-mediated signaling pathway]
Show all
670 aa
76.2 kDa
No 0
FERMT3-230
ENSP00000513994
ENST00000698868
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007229 [integrin-mediated signaling pathway]
Show all
618 aa
70.8 kDa
No 0
FERMT3-231
ENSP00000513995
ENST00000698869
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007229 [integrin-mediated signaling pathway]
Show all
585 aa
67 kDa
No 0
FERMT3-232
ENSP00000513996
ENST00000698870
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007229 [integrin-mediated signaling pathway]
Show all
663 aa
75.4 kDa
No 0
FERMT3-236
ENSP00000513999
ENST00000698874
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007229 [integrin-mediated signaling pathway]
Show all
483 aa
54.8 kDa
No 0
FERMT3-240
ENSP00000514000
ENST00000698878
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Immune system diseases
   Primary immunodeficiency
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007229 [integrin-mediated signaling pathway]
Show all
661 aa
75.2 kDa
No 0

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