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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:41.3 nTPM
HPA Brain:65.9 nTPM
GTEx:41.3 nTPM
FANTOM5:103.2 Scaled Tags Per Million
Pig:30.3 nTPM
Mouse:31.2 nTPM
Allen mouse:0.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA039650
Glial cells Medium
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 64.3
1857 Female, age 85, left hemisphere 75.5
1781 Male, age 74, unknown 72.5
2290 Female, age 72, unknown 71.8
2846 Female, age 79, unknown 68.7
1854 Male, age 80, left hemisphere 64.1
2288 Male, age 75, left hemisphere 56.4
2289 Male, age 61, right hemisphere 55.8
2481 Female, age 94, left hemisphere 49.5
Globus pallidus, externus
nTPM: 53.9
2646 Male, age 61, right hemisphere 58.5
2772 Female, age 79, unknown 55.4
2567 Female, age 72, unknown 53.3
2395 Male, age 75, both hemispheres 52.5
1996 Male, age 80, right hemisphere 49.8
Globus pallidus, internus
nTPM: 53.6
2287 Male, age 75, right hemisphere 63.5
2483 Female, age 94, right hemisphere 58.2
2778 Female, age 91, both hemispheres 57.8
2111 Female, age 85, right hemisphere 52.9
2566 Female, age 72, unknown 49.9
1818 Male, age 74, unknown 49.4
2037 Male, age 80, right hemisphere 43.6
Nucleus accumbens
nTPM: 63.0
1783 Male, age 74, unknown 79.8
1856 Female, age 91, right hemisphere 68.7
1806 Female, age 85, left hemisphere 66.4
2698 Female, age 72, unknown 64.0
2824 Male, age 61, right hemisphere 62.8
2286 Male, age 75, left hemisphere 57.7
2391 Female, age 94, left hemisphere 53.8
2732 Male, age 80, right hemisphere 51.1
Nucleus basalis of Meynert
nTPM: 60.8
2484 Female, age 94, left hemisphere 73.9
2821 Male, age 75, both hemispheres 59.4
2569 Male, age 61, both hemispheres 55.8
2393 Male, age 80, right hemisphere 54.2
Nucleus of the diagonal band
nTPM: 57.2
2775 Male, age 80, right hemisphere 67.8
2195 Female, age 85, both hemispheres 64.1
1812 Female, age 91, both hemispheres 52.2
1979 Male, age 74, unknown 51.9
2029 Male, age 61, right hemisphere 50.0
Putamen
nTPM: 65.9
1838 Male, age 80, right hemisphere 71.9
2647 Male, age 75, left hemisphere 69.4
2466 Female, age 79, unknown 68.8
1937 Female, age 91, right hemisphere 65.9
2489 Female, age 72, unknown 65.8
1829 Male, age 74, unknown 61.8
2482 Female, age 94, left hemisphere 57.5
Septal nuclei
nTPM: 52.2
1960 Male, age 74, unknown 62.0
2629 Female, age 94, right hemisphere 54.4
2059 Female, age 85, both hemispheres 53.0
2031 Female, age 72, unknown 52.4
2394 Male, age 61, left hemisphere 49.1
2199 Male, age 80, right hemisphere 48.1
2009 Female, age 91, both hemispheres 46.8
Stria terminalis, bed nucleus
nTPM: 57.2
2486 Female, age 94, both hemispheres 62.7
1974 Female, age 91, both hemispheres 61.2
2201 Male, age 74, unknown 47.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 31.7
Samples: 246

Max nTPM: 68.9
Min nTPM: 13.9
Std nTPM: 9.4
Median nTPM: 29.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 68.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 64.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 56.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 56.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 54.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 53.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 52.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 52.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 50.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 50.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 49.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 49.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 48.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 48.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 48.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 47.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 47.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 47.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 46.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 46.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 45.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 45.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 45.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 45.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 45.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 45.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 45.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 45.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 45.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 44.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 44.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 44.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 44.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 44.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 43.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 42.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 42.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 42.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 42.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 42.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 42.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 41.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 41.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 41.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 41.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 40.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 40.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 40.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 40.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 40.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 40.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 40.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 39.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 39.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 39.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 38.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 37.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 37.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 37.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 37.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 37.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 37.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 36.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 36.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 36.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 36.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 36.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 36.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 36.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 35.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 35.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 35.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 35.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 35.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 35.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 34.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 34.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 34.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 34.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 34.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 34.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 34.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 34.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 33.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 33.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 33.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 33.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 33.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 33.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 33.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 33.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 32.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 32.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 32.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 32.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 32.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 32.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 32.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 32.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 31.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 31.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 31.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 31.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 31.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 31.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 31.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 31.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 31.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 31.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 31.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 31.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 31.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 30.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 30.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 30.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 30.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 30.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 30.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 29.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 29.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 29.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 29.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 29.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 29.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 29.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 29.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 29.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 29.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 29.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 29.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 29.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 29.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 28.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 28.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 28.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 28.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 28.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 28.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 28.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 27.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 27.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 27.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 27.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 27.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 27.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 27.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 27.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 27.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 27.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 27.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 27.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 27.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 27.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 27.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 27.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 26.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 26.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 26.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 26.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 26.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 26.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 26.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 26.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 26.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 26.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 26.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 26.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 26.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 26.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 26.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 26.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 26.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 25.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 25.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 25.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 25.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 25.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 25.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 25.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 25.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 25.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 24.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 24.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 24.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 24.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 24.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 24.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 24.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 24.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 24.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 24.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 24.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 24.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 23.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 23.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 23.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 23.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 23.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 23.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 23.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 23.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 23.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 23.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 23.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 23.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 23.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 22.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 22.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 22.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 22.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 22.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 22.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 22.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 22.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 21.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 21.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 21.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 21.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 21.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 21.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 21.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 21.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 20.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 20.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 20.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 20.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 20.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 20.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 20.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 20.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 20.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 20.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 19.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 19.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 19.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 19.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 18.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 18.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 18.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 18.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 18.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 18.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 18.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 17.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 16.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 13.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 41.3
Samples: 246

Max nTPM: 86.8
Min nTPM: 15.3
Std nTPM: 14.1
Median nTPM: 40.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 86.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 82.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 79.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 73.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 70.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 70.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 69.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 67.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 66.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 66.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 66.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 65.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 63.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 63.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 62.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 62.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 61.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 61.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 61.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 61.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 61.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 61.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 61.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 61.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 61.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 61.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 61.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 60.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 60.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 60.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 59.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 59.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 58.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 58.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 58.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 57.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 57.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 57.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 56.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 56.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 55.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 55.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 55.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 55.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 54.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 54.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 54.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 54.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 54.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 53.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 53.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 52.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 52.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 52.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 52.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 51.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 51.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 51.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 51.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 51.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 50.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 50.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 50.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 50.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 50.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 50.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 50.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 49.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 49.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 49.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 49.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 49.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 49.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 48.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 48.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 48.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 48.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 48.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 48.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 48.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 48.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 48.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 48.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 48.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 47.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 47.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 47.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 46.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 46.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 46.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 46.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 46.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 46.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 46.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 45.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 45.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 45.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 44.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 44.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 44.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 44.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 44.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 44.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 44.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 44.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 44.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 44.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 43.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 43.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 43.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 43.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 42.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 42.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 42.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 42.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 42.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 42.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 41.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 41.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 41.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 41.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 40.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 40.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 40.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 40.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 40.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 40.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 39.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 39.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 39.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 38.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 38.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 38.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 38.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 38.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 38.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 37.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 37.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 37.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 37.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 37.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 37.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 37.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 37.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 36.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 36.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 36.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 36.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 36.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 36.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 36.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 36.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 36.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 35.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 35.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 35.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 34.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 34.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 34.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 34.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 34.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 34.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 34.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 33.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 33.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 33.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 32.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 32.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 31.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 31.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 31.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 31.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 30.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 30.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 30.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 30.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 30.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 30.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 30.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 29.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 29.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 29.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 29.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 29.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 29.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 29.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 28.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 28.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 28.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 28.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 28.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 28.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 28.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 28.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 28.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 28.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 28.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 27.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 27.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 27.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 27.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 26.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 26.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 26.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 26.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 26.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 25.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 25.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 25.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 25.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 25.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 25.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 24.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 24.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 24.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 23.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 23.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 23.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 22.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 22.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 22.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 22.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 22.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 22.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 22.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 22.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 22.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 22.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 21.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 21.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 21.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 21.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 21.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 21.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 20.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 20.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 20.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 20.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 20.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 19.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 19.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 18.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 18.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 16.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 15.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 15.3
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Brain - Putamen (basal ganglia)
Average nTPM: 31.2
Samples: 205

Max nTPM: 66.4
Min nTPM: 16.6
Std nTPM: 8.6
Median nTPM: 29.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 66.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 59.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 58.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 52.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 50.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 49.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 49.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 48.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 46.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 46.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 46.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 46.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 46.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 45.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 45.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 45.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 45.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 45.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 44.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 44.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 44.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 43.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 43.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 43.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 42.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 42.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 41.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 41.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 41.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 41.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 41.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 41.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 39.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 39.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 39.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 39.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 38.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 38.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 38.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 38.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 38.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 37.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 37.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 37.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 37.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 37.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 37.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 37.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 36.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 36.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 36.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 36.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 36.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 36.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 36.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 36.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 35.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 35.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 35.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 35.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 35.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 35.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 34.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 34.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 34.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 34.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 33.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 33.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 33.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 33.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 33.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 32.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 32.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 32.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 32.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 32.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 32.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 31.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 31.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 31.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 31.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 31.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 31.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 31.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 30.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 30.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 30.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 30.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 30.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 30.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 30.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 30.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 30.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 30.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 29.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 29.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 29.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 29.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 29.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 29.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 29.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 29.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 29.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 29.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 29.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 29.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 28.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 28.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 28.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 28.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 28.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 28.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 28.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 28.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 28.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 28.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 27.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 27.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 27.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 27.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 27.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 27.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 27.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 27.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 27.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 27.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 27.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 27.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 27.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 27.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 27.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 26.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 26.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 26.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 26.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 26.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 26.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 26.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 26.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 26.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 25.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 25.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 25.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 25.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 25.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 25.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 25.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 25.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 25.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 25.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 25.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 24.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 24.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 24.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 24.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 24.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 24.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 24.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 24.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 24.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 24.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 23.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 23.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 23.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 23.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 23.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 23.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 23.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 23.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 23.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 23.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 23.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 23.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 23.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 23.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 23.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 22.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 22.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 22.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 22.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 22.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 22.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 22.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 22.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 22.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 21.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 21.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 21.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 21.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 21.3
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 21.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 21.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 20.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 20.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 20.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 20.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 20.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 19.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 19.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 19.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 19.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 18.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 18.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 16.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 16.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

103.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 103.2
FF:10164-103B2 76 years, female 103.2
Nucleus accumbens
Scaled Tags Per Million: 89.1
FF:10037-101F1 23-56 years, mixed 89.1
Putamen
Scaled Tags Per Million: 96.2
FF:10176-103C5 60 years, female 96.2
Globus pallidus
Scaled Tags Per Million: 62.3
FF:10175-103C4 60 years, female 67.4
FF:10161-103A8 76 years, female 57.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.3
Pig sample Sample description nTPM
Caudate
nTPM: 30.3
Samples: 4

Max nTPM: 35.3
Min nTPM: 24.7
Sample A Female 24.7
Sample B Female 32.6
Sample C Male 35.3
Sample D Male 28.4
Putamen
nTPM: 28.7
Samples: 4

Max nTPM: 37.5
Min nTPM: 21.5
Sample A Female 21.5
Sample B Female 25.1
Sample C Male 37.5
Sample D Male 30.6
Septum
nTPM: 23.0
Samples: 4

Max nTPM: 27.0
Min nTPM: 18.3
Sample A Female 27.0
Sample B Female 24.8
Sample C Male 21.9
Sample D Male 18.3
Ventral pallidum
nTPM: 26.0
Samples: 4

Max nTPM: 28.6
Min nTPM: 23.5
Sample A Female 25.6
Sample B Female 28.6
Sample C Male 26.3
Sample D Male 23.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 25.6
Samples: 4

Max nTPM: 31.0
Min nTPM: 20.1
Sample A Male 27.6
Sample B Male 31.0
Sample C Female 20.1
Sample D Female 23.7
Septum
nTPM: 31.2
Samples: 4

Max nTPM: 33.6
Min nTPM: 27.3
Sample A Male 32.4
Sample B Male 31.3
Sample C Female 33.6
Sample D Female 27.3
Ventral forebrain
nTPM: 29.8
Samples: 4

Max nTPM: 34.1
Min nTPM: 26.8
Sample A Male 30.8
Sample B Male 27.4
Sample C Female 34.1
Sample D Female 26.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
71147765 Antisense, RP_050719_02_C04, Mouse strain C57BL/6J (56 days, male) 0.0
72081738 Antisense, RP_051019_01_A04, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
71147765 Antisense, RP_050719_02_C04, Mouse strain C57BL/6J (56 days, male) 0.0
72081738 Antisense, RP_051019_01_A04, Mouse strain C57BL/6J (56 days, male) 0.0

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