HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:80.3 nTPM
HPA Brain:58.8 nTPM
GTEx:80.3 nTPM
FANTOM5:64.7 Scaled Tags Per Million
Pig:2.0 nTPM
Mouse:0.3 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008933Antibody HPA073283
Glial cells LowMedium
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 58.8
Sample id Sample description nTPM
Hippocampus
nTPM: 36.9
2529 Female, age 94, left hemisphere 44.0
2621 Female, age 67, right hemisphere 42.5
1898 Male, age 80, left hemisphere 39.1
1911 Female, age 85, right hemisphere 38.3
2148 Female, age 91, left hemisphere 32.2
1855 Male, age 76, left hemisphere 25.4
Dentate gyrus
nTPM: 42.1
2530 Female, age 94, left hemisphere 81.7
2528 Male, age 74, both hemispheres 42.0
2010 Male, age 76, both hemispheres 39.7
2531 Female, age 67, both hemispheres 31.0
2246 Female, age 85, both hemispheres 30.3
1927 Female, age 91, both hemispheres 27.9
Entorhinal gyrus
nTPM: 44.5
2117 Female, age 91, right hemisphere 108.0
2764 Male, age 80, right hemisphere 49.8
1938 Female, age 85, left hemisphere 30.8
2613 Female, age 94, left hemisphere 28.4
2686 Male, age 75, right hemisphere 26.8
1787 Male, age 76, left hemisphere 23.0
Hippocampus, CA1
nTPM: 26.4
2527 Male, age 74, both hemispheres 39.3
2749 Male, age 80, left hemisphere 32.7
1873 Female, age 85, both hemispheres 27.5
2082 Female, age 91, right hemisphere 23.8
2045 Male, age 76, both hemispheres 8.9
Hippocampus, CA2
nTPM: 47.3
1963 Male, age 80, left hemisphere 67.2
1940 Female, age 85, left hemisphere 57.5
2249 Male, age 74, both hemispheres 49.6
2437 Female, age 94, left hemisphere 49.5
2113 Female, age 91, right hemisphere 38.4
1892 Male, age 76, both hemispheres 21.8
Hippocampus, CA3
nTPM: 27.4
1891 Female, age 85, both hemispheres 50.4
1867 Male, age 76, both hemispheres 39.2
2436 Male, age 74, both hemispheres 28.6
2137 Male, age 80, left hemisphere 21.6
2620 Female, age 94, left hemisphere 14.0
2861 Female, age 67, both hemispheres 10.8
Parahippocampal cortex
nTPM: 31.9
2692 Male, age 74, both hemispheres 53.6
2532 Female, age 72, left hemisphere 48.5
1990 Female, age 91, right hemisphere 47.9
1850 Male, age 80, both hemispheres 33.8
1933 Female, age 85, both hemispheres 27.9
2245 Female, age 91, both hemispheres 27.8
2018 Male, age 76, both hemispheres 24.5
2693 Female, age 94, both hemispheres 23.2
2250 Female, age 67, right hemisphere 23.0
2622 Female, age 67, right hemisphere 9.1
Perirhinal gyrus
nTPM: 19.5
2521 Female, age 94, right hemisphere 24.1
1794 Male, age 80, right hemisphere 19.4
2848 Male, age 76, right hemisphere 18.6
1847 Female, age 91, left hemisphere 18.0
1841 Female, age 85, right hemisphere 17.4
Subiculum
nTPM: 58.8
2042 Male, age 76, both hemispheres 79.5
1901 Male, age 80, both hemispheres 73.9
2438 Female, age 94, left hemisphere 66.6
2729 Female, age 91, right hemisphere 44.6
2619 Male, age 74, both hemispheres 44.3
1977 Female, age 85, both hemispheres 43.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 80.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 80.3
Samples: 197

Max nTPM: 339.7
Min nTPM: 4.9
Std nTPM: 57.7
Median nTPM: 63.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 339.7
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 294.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 260.0
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 241.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 227.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 226.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 222.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 218.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 200.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 192.8
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 192.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 64.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.7
FF:10153-102I9 76 years, female 68.2
FF:10169-103B7 60 years, female 61.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 2.0
Pig sample Sample description nTPM
Subiculum
nTPM: 1.4
Samples: 4

Max nTPM: 1.7
Min nTPM: 1.0
Sample A Female 1.0
Sample B Female 1.2
Sample C Male 1.7
Sample D Male 1.6
Dorsal hippocampus
nTPM: 2.0
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.7
Sample A Female 1.8
Sample B Female 1.9
Sample C Male 1.7
Sample D Male 2.4
Entorhinal cortex
nTPM: 1.7
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.3
Sample A Female 1.3
Sample B Female 2.4
Sample C Male 1.3
Sample D Male 1.9
Ventral hippocampus
nTPM: 1.8
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.4
Sample A Female 1.6
Sample B Female 2.4
Sample C Male 1.4
Sample D Male 1.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 0.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.2
Samples: 4

Max nTPM: 0.5
Min nTPM: 0.0
Sample A Male 0.1
Sample B Male 0.0
Sample C Female 0.5
Sample D Female 0.0
Hippocampal formation
nTPM: 0.4
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.3
Sample C Female 0.6
Sample D Female 0.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69838254 Antisense, RP_050224_02_H12, Mouse strain C57BL/6J (56 days, male) 0.0

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