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ABTB3
HPA
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  • ABTB3
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ABTB3
Synonyms ABTB2B, BTBD11, FLJ33957
Gene descriptioni

Full gene name according to HGNC.

Ankyrin repeat and BTB domain containing 3
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 12
Cytoband q23.3
Chromosome location (bp) 107318421 - 107659642
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000151136 (version 109)
Entrez gene 121551
HGNC HGNC:23844
UniProt A6QL63 (UniProt - Evidence at transcript level)
neXtProt NX_A6QL63
GeneCards ABTB3
Antibodypedia ABTB3 antibodies


PROTEIN FUNCTION
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable protein heterodimerization activity. Predicted to be involved in SMAD protein signal transduction. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ABTB3-201
ENSP00000280758
ENST00000280758
A6QL63
[Direct mapping] Ankyrin repeat and BTB/POZ domain-containing protein BTBD11
Show all
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0016020 [membrane]
GO:0046982 [protein heterodimerization activity]
GO:0060395 [SMAD protein signal transduction]
Show all
1104 aa
120.9 kDa
No 0
ABTB3-202
ENSP00000349690
ENST00000357167
A6QL63
[Direct mapping] Ankyrin repeat and BTB/POZ domain-containing protein BTBD11
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0016020 [membrane]
GO:0046982 [protein heterodimerization activity]
GO:0060395 [SMAD protein signal transduction]
Show all
641 aa
71.9 kDa
No 0
ABTB3-203
ENSP00000407416
ENST00000415943
C9JV03
[Direct mapping] Ankyrin repeat and BTB/POZ domain-containing protein BTBD11
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
237 aa
26.7 kDa
No 0
ABTB3-204
ENSP00000413889
ENST00000420571
A6QL63
[Direct mapping] Ankyrin repeat and BTB/POZ domain-containing protein BTBD11
Show all
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0016020 [membrane]
GO:0046982 [protein heterodimerization activity]
GO:0060395 [SMAD protein signal transduction]
Show all
985 aa
107.9 kDa
No 0
ABTB3-205
ENSP00000447319
ENST00000490090
A6QL63
[Direct mapping] Ankyrin repeat and BTB/POZ domain-containing protein BTBD11
Show all
   Phobius predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0016020 [membrane]
GO:0046982 [protein heterodimerization activity]
GO:0060395 [SMAD protein signal transduction]
Show all
1007 aa
110.1 kDa
No 0
ABTB3-206
ENSP00000448322
ENST00000494235
A6QL63
[Direct mapping] Ankyrin repeat and BTB/POZ domain-containing protein BTBD11
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0016020 [membrane]
GO:0046982 [protein heterodimerization activity]
GO:0060395 [SMAD protein signal transduction]
Show all
183 aa
20.7 kDa
No 0
ABTB3-207
ENSP00000447606
ENST00000550706
H0YHR1
[Direct mapping] Ankyrin repeat and BTB/POZ domain-containing protein BTBD11
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0046982 [protein heterodimerization activity]
Show all
222 aa
25 kDa
No 0

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