HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:26.1 nTPM
HPA Brain:41.2 nTPM
GTEx:26.1 nTPM
FANTOM5:22.2 Scaled Tags Per Million
Pig:22.8 nTPM
Mouse:28.9 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049066
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 41.2
Sample id Sample description nTPM
Hippocampus
nTPM: 38.6
1855 Male, age 76, left hemisphere 44.1
1898 Male, age 80, left hemisphere 38.5
2148 Female, age 91, left hemisphere 38.5
1911 Female, age 85, right hemisphere 37.5
2621 Female, age 67, right hemisphere 37.4
2529 Female, age 94, left hemisphere 35.8
Dentate gyrus
nTPM: 38.9
2010 Male, age 76, both hemispheres 40.8
2530 Female, age 94, left hemisphere 40.7
2531 Female, age 67, both hemispheres 40.4
1927 Female, age 91, both hemispheres 39.9
2246 Female, age 85, both hemispheres 37.5
2528 Male, age 74, both hemispheres 33.9
Entorhinal gyrus
nTPM: 36.8
2613 Female, age 94, left hemisphere 43.4
2764 Male, age 80, right hemisphere 42.1
1787 Male, age 76, left hemisphere 38.4
2686 Male, age 75, right hemisphere 36.3
1938 Female, age 85, left hemisphere 34.5
2117 Female, age 91, right hemisphere 26.1
Hippocampus, CA1
nTPM: 40.7
2749 Male, age 80, left hemisphere 54.2
1873 Female, age 85, both hemispheres 43.6
2045 Male, age 76, both hemispheres 40.1
2527 Male, age 74, both hemispheres 34.7
2082 Female, age 91, right hemisphere 30.9
Hippocampus, CA2
nTPM: 37.2
1892 Male, age 76, both hemispheres 49.3
1963 Male, age 80, left hemisphere 40.3
2437 Female, age 94, left hemisphere 37.9
2113 Female, age 91, right hemisphere 32.9
2249 Male, age 74, both hemispheres 32.1
1940 Female, age 85, left hemisphere 31.0
Hippocampus, CA3
nTPM: 41.2
2137 Male, age 80, left hemisphere 52.2
2620 Female, age 94, left hemisphere 50.7
2861 Female, age 67, both hemispheres 44.7
1867 Male, age 76, both hemispheres 42.3
1891 Female, age 85, both hemispheres 29.9
2436 Male, age 74, both hemispheres 27.3
Parahippocampal cortex
nTPM: 35.7
2622 Female, age 67, right hemisphere 41.5
2018 Male, age 76, both hemispheres 41.2
1933 Female, age 85, both hemispheres 37.0
2245 Female, age 91, both hemispheres 36.3
2532 Female, age 72, left hemisphere 36.3
2250 Female, age 67, right hemisphere 35.7
2693 Female, age 94, both hemispheres 35.2
1990 Female, age 91, right hemisphere 32.9
1850 Male, age 80, both hemispheres 31.6
2692 Male, age 74, both hemispheres 29.7
Perirhinal gyrus
nTPM: 35.9
1794 Male, age 80, right hemisphere 37.9
1841 Female, age 85, right hemisphere 36.6
1847 Female, age 91, left hemisphere 35.9
2521 Female, age 94, right hemisphere 34.8
2848 Male, age 76, right hemisphere 34.5
Subiculum
nTPM: 34.5
1901 Male, age 80, both hemispheres 39.5
2042 Male, age 76, both hemispheres 35.9
1977 Female, age 85, both hemispheres 34.7
2438 Female, age 94, left hemisphere 34.6
2619 Male, age 74, both hemispheres 31.9
2729 Female, age 91, right hemisphere 30.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 26.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 26.1
Samples: 197

Max nTPM: 57.2
Min nTPM: 7.1
Std nTPM: 8.7
Median nTPM: 25.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 57.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 52.3
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 50.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 48.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 46.1
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 45.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 45.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 44.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 44.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 42.7
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 39.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 22.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.2
FF:10153-102I9 76 years, female 28.8
FF:10169-103B7 60 years, female 15.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 22.8
Pig sample Sample description nTPM
Subiculum
nTPM: 22.9
Samples: 4

Max nTPM: 29.8
Min nTPM: 18.5
Sample A Female 29.8
Sample B Female 20.1
Sample C Male 23.0
Sample D Male 18.5
Dorsal hippocampus
nTPM: 17.3
Samples: 4

Max nTPM: 19.3
Min nTPM: 14.3
Sample A Female 19.2
Sample B Female 19.3
Sample C Male 14.3
Sample D Male 16.5
Entorhinal cortex
nTPM: 22.2
Samples: 4

Max nTPM: 24.0
Min nTPM: 19.6
Sample A Female 23.8
Sample B Female 19.6
Sample C Male 24.0
Sample D Male 21.5
Ventral hippocampus
nTPM: 17.3
Samples: 4

Max nTPM: 21.7
Min nTPM: 12.1
Sample A Female 12.1
Sample B Female 14.8
Sample C Male 21.7
Sample D Male 20.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 28.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.9
Samples: 4

Max nTPM: 31.1
Min nTPM: 27.4
Sample A Male 27.4
Sample B Male 31.1
Sample C Female 27.8
Sample D Female 29.4
Hippocampal formation
nTPM: 23.0
Samples: 4

Max nTPM: 26.3
Min nTPM: 17.6
Sample A Male 26.3
Sample B Male 22.1
Sample C Female 17.6
Sample D Female 26.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
1345 Antisense, RP_Baylor_103154, Mouse strain C57BL/6J (56 days, male) 0.9
1346 Antisense, RP_Baylor_103154, Mouse strain C57BL/6J (56 days, male) 0.7

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