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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:78.2 nTPM
HPA Brain:87.4 nTPM
GTEx:78.2 nTPM
FANTOM5:267.3 Scaled Tags Per Million
Pig:16.2 nTPM
Mouse:4.9 nTPM
Allen mouse:0.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA018493Antibody HPA020586
Glial cells MediumMedium
Neuronal cells Not detectedNot detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

87.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 87.4
1781 Male, age 74, unknown 158.9
2289 Male, age 61, right hemisphere 109.0
2481 Female, age 94, left hemisphere 100.4
2290 Female, age 72, unknown 77.3
1854 Male, age 80, left hemisphere 75.4
1857 Female, age 85, left hemisphere 72.6
2846 Female, age 79, unknown 60.0
2288 Male, age 75, left hemisphere 45.9
Globus pallidus, externus
nTPM: 85.3
2646 Male, age 61, right hemisphere 153.8
1996 Male, age 80, right hemisphere 92.3
2772 Female, age 79, unknown 75.9
2395 Male, age 75, both hemispheres 53.6
2567 Female, age 72, unknown 51.0
Globus pallidus, internus
nTPM: 72.9
2483 Female, age 94, right hemisphere 98.6
2037 Male, age 80, right hemisphere 90.2
1818 Male, age 74, unknown 80.0
2778 Female, age 91, both hemispheres 65.0
2566 Female, age 72, unknown 61.4
2111 Female, age 85, right hemisphere 60.5
2287 Male, age 75, right hemisphere 54.3
Nucleus accumbens
nTPM: 65.6
2391 Female, age 94, left hemisphere 90.4
2698 Female, age 72, unknown 73.3
2732 Male, age 80, right hemisphere 70.4
1783 Male, age 74, unknown 66.4
1806 Female, age 85, left hemisphere 65.1
1856 Female, age 91, right hemisphere 64.1
2286 Male, age 75, left hemisphere 48.9
2824 Male, age 61, right hemisphere 46.1
Nucleus basalis of Meynert
nTPM: 86.4
2569 Male, age 61, both hemispheres 145.0
2393 Male, age 80, right hemisphere 83.1
2484 Female, age 94, left hemisphere 68.8
2821 Male, age 75, both hemispheres 48.6
Nucleus of the diagonal band
nTPM: 44.5
1812 Female, age 91, both hemispheres 69.8
1979 Male, age 74, unknown 57.8
2775 Male, age 80, right hemisphere 41.3
2195 Female, age 85, both hemispheres 32.3
2029 Male, age 61, right hemisphere 21.5
Putamen
nTPM: 63.3
2482 Female, age 94, left hemisphere 90.8
2489 Female, age 72, unknown 75.9
1937 Female, age 91, right hemisphere 68.5
1829 Male, age 74, unknown 56.8
2647 Male, age 75, left hemisphere 54.6
1838 Male, age 80, right hemisphere 51.0
2466 Female, age 79, unknown 45.4
Septal nuclei
nTPM: 53.2
2199 Male, age 80, right hemisphere 83.9
2009 Female, age 91, both hemispheres 57.3
2629 Female, age 94, right hemisphere 54.7
2394 Male, age 61, left hemisphere 50.5
2059 Female, age 85, both hemispheres 48.7
2031 Female, age 72, unknown 41.5
1960 Male, age 74, unknown 35.9
Stria terminalis, bed nucleus
nTPM: 46.7
2201 Male, age 74, unknown 64.9
1974 Female, age 91, both hemispheres 40.6
2486 Female, age 94, both hemispheres 34.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 78.2
Samples: 246

Max nTPM: 1385.8
Min nTPM: 6.2
Std nTPM: 121.3
Median nTPM: 46.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 1385.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1060.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 408.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 365.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 361.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 274.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 258.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 256.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 255.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 252.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 222.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 217.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 217.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 209.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 200.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 186.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 174.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 171.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 162.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 160.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 150.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 150.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 150.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 150.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 148.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 146.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 140.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 140.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 134.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 134.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 134.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 131.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 130.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 126.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 126.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 123.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 121.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 118.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 115.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 113.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 112.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 111.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 108.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 105.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 104.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 99.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 98.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 96.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 94.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 92.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 92.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 92.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 90.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 89.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 89.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 88.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 85.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 84.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 83.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 82.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 81.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 81.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 80.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 79.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 79.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 77.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 77.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 77.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 77.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 76.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 75.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 75.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 75.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 74.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 73.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 72.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 72.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 72.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 72.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 71.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 69.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 68.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 67.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 66.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 66.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 66.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 65.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 65.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 64.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 64.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 63.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 63.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 62.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 61.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 61.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 60.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 59.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 59.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 58.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 58.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 57.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 56.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 56.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 56.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 56.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 56.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 55.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 55.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 55.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 54.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 53.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 53.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 53.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 52.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 52.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 52.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 52.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 51.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 51.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 49.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 48.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 47.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 47.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 46.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 46.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 46.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 46.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 45.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 45.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 45.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 45.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 45.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 45.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 44.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 44.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 44.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 44.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 44.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 43.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 43.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 42.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 42.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 42.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 41.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 41.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 40.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 40.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 40.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 40.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 40.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 39.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 39.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 39.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 38.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 38.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 38.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 38.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 37.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 37.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 37.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 37.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 37.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 36.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 36.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 36.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 36.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 36.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 36.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 36.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 36.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 36.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 35.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 35.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 35.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 35.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 35.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 35.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 34.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 34.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 34.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 33.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 33.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 33.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 33.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 32.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 32.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 32.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 32.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 31.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 31.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 31.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 31.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 31.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 30.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 30.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 30.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 30.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 30.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 29.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 29.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 28.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 28.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 28.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 27.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 26.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 25.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 25.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 25.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 25.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 25.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 25.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 24.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 24.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 23.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 23.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 23.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 22.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 21.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 21.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 21.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 21.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 20.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 20.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 20.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 20.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 19.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 19.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 19.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 19.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 19.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 18.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 18.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 17.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 16.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 16.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 16.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 15.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 15.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 14.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 13.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 12.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 11.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 11.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 9.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 7.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 6.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 62.2
Samples: 246

Max nTPM: 596.6
Min nTPM: 8.7
Std nTPM: 71.9
Median nTPM: 38.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 596.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 421.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 359.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 337.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 336.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 308.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 294.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 247.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 224.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 213.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 207.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 197.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 197.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 194.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 186.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 182.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 168.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 164.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 163.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 160.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 153.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 139.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 138.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 135.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 132.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 131.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 129.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 126.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 126.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 123.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 116.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 110.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 110.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 107.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 106.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 104.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 101.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 101.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 100.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 98.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 98.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 97.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 90.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 88.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 87.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 85.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 84.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 81.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 77.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 77.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 74.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 73.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 73.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 72.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 71.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 71.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 69.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 69.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 68.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 67.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 67.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 66.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 66.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 66.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 64.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 63.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 62.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 61.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 61.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 61.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 60.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 60.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 59.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 56.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 56.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 56.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 56.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 55.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 55.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 55.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 55.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 54.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 54.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 54.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 53.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 52.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 52.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 51.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 51.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 51.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 50.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 50.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 50.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 49.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 48.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 47.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 47.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 47.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 46.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 46.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 45.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 45.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 45.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 45.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 44.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 43.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 43.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 43.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 43.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 43.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 43.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 43.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 42.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 42.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 42.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 41.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 41.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 41.1
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 40.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 40.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 40.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 39.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 38.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 38.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 38.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 38.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 38.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 37.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 37.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 36.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 36.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 36.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 35.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 35.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 35.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 35.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 35.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 34.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 34.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 34.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 33.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 33.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 33.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 32.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 32.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 32.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 31.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 31.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 31.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 31.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 31.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 30.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 30.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 30.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 30.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 30.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 29.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 29.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 29.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 29.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 29.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 29.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 28.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 28.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 26.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 26.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 26.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 26.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 25.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 25.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 25.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 25.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 25.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 25.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 24.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 24.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 24.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 24.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 24.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 24.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 24.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 24.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 24.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 24.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 24.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 24.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 23.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 23.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 23.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 23.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 23.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 23.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 22.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 22.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 22.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 22.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 21.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 21.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 21.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 21.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 20.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 20.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 20.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 20.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 20.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 19.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 19.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 19.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 19.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 18.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 18.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 18.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 18.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 18.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 17.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 17.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 17.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 17.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 17.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 17.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 16.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 16.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 16.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 16.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 16.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 16.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 15.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 15.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 15.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 14.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 14.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 14.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 14.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 14.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 13.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 13.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 13.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 13.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 13.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 12.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 12.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 11.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 10.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 9.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 9.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 8.7
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Brain - Putamen (basal ganglia)
Average nTPM: 71.3
Samples: 205

Max nTPM: 643.3
Min nTPM: 7.9
Std nTPM: 74.3
Median nTPM: 47.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 643.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 426.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 371.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 310.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 285.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 235.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 235.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 232.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 228.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 225.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 216.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 197.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 185.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 184.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 162.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 158.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 157.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 155.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 148.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 148.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 147.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 147.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 140.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 136.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 134.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 130.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 128.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 123.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 120.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 114.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 113.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 109.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 107.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 107.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 106.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 105.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 103.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 103.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 102.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 99.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 99.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 98.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 95.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 92.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 92.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 92.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 91.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 91.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 90.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 90.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 87.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 86.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 85.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 85.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 82.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 81.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 81.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 81.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 79.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 79.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 78.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 77.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 76.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 75.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 74.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 74.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 70.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 69.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 69.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 67.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 66.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 66.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 64.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 63.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 63.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 62.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 61.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 61.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 60.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 57.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 57.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 56.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 55.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 53.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 53.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 52.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 52.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 52.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 51.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 51.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 51.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 51.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 51.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 51.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 51.3
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 51.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 50.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 50.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 49.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 48.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 48.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 48.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 47.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 46.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 45.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 45.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 44.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 44.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 43.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 41.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 41.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 41.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 41.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 41.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 41.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 40.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 40.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 40.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 39.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 39.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 39.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 39.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 39.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 38.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 38.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 38.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 38.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 38.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 37.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 37.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 37.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 36.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 36.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 35.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 35.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 35.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 35.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 34.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 34.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 34.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 34.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 33.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 33.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 33.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 33.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 33.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 33.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 32.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 32.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 32.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 31.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 31.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 31.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 30.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 30.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 30.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 30.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 30.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 29.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 29.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 29.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 28.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 28.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 28.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 28.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 28.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 27.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 27.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 26.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 25.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 25.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 25.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 24.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 24.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 24.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 24.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 22.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 21.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 20.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 20.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 19.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 19.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 19.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 19.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 19.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 18.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 18.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 18.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 18.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 18.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 17.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 17.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 16.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 16.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 16.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 16.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 15.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 15.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 14.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 12.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 10.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 9.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 8.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 8.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 7.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

267.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 267.3
FF:10164-103B2 76 years, female 267.3
Nucleus accumbens
Scaled Tags Per Million: 66.1
FF:10037-101F1 23-56 years, mixed 66.1
Putamen
Scaled Tags Per Million: 182.3
FF:10176-103C5 60 years, female 182.3
Globus pallidus
Scaled Tags Per Million: 178.9
FF:10161-103A8 76 years, female 202.5
FF:10175-103C4 60 years, female 155.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.2
Pig sample Sample description nTPM
Caudate
nTPM: 14.8
Samples: 4

Max nTPM: 16.6
Min nTPM: 12.1
Sample A Female 14.4
Sample B Female 16.1
Sample C Male 16.6
Sample D Male 12.1
Putamen
nTPM: 16.2
Samples: 4

Max nTPM: 17.7
Min nTPM: 12.6
Sample A Female 17.7
Sample B Female 12.6
Sample C Male 17.6
Sample D Male 16.9
Septum
nTPM: 14.3
Samples: 4

Max nTPM: 19.1
Min nTPM: 11.7
Sample A Female 13.8
Sample B Female 12.4
Sample C Male 19.1
Sample D Male 11.7
Ventral pallidum
nTPM: 15.7
Samples: 4

Max nTPM: 22.2
Min nTPM: 11.3
Sample A Female 11.3
Sample B Female 15.9
Sample C Male 22.2
Sample D Male 13.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 4.9
Samples: 4

Max nTPM: 6.2
Min nTPM: 3.7
Sample A Male 5.8
Sample B Male 6.2
Sample C Female 3.7
Sample D Female 3.7
Septum
nTPM: 4.9
Samples: 4

Max nTPM: 5.8
Min nTPM: 4.3
Sample A Male 4.5
Sample B Male 4.3
Sample C Female 5.8
Sample D Female 5.0
Ventral forebrain
nTPM: 4.9
Samples: 4

Max nTPM: 5.8
Min nTPM: 4.0
Sample A Male 4.0
Sample B Male 5.8
Sample C Female 5.6
Sample D Female 4.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.6
69528058 Antisense, RP_050421_03_A06, Mouse strain C57BL/6J (56 days, male) 0.6
Pallidum
Expression energy: 0.7
69528058 Antisense, RP_050421_03_A06, Mouse strain C57BL/6J (56 days, male) 0.7

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