HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:3.6 nTPM
HPA Brain:37.3 nTPM
GTEx:3.6 nTPM
FANTOM5:22.6 Scaled Tags Per Million
Pig:32.8 nTPM
Mouse:26.2 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 37.3
Sample id Sample description nTPM
Hippocampus
nTPM: 24.9
2529 Female, age 94, left hemisphere 31.4
1898 Male, age 80, left hemisphere 30.1
1911 Female, age 85, right hemisphere 23.8
2148 Female, age 91, left hemisphere 21.8
2621 Female, age 67, right hemisphere 21.1
1855 Male, age 76, left hemisphere 20.9
Dentate gyrus
nTPM: 22.0
2010 Male, age 76, both hemispheres 23.4
2530 Female, age 94, left hemisphere 22.8
1927 Female, age 91, both hemispheres 22.4
2246 Female, age 85, both hemispheres 22.4
2528 Male, age 74, both hemispheres 20.9
2531 Female, age 67, both hemispheres 19.9
Entorhinal gyrus
nTPM: 29.0
2686 Male, age 75, right hemisphere 33.7
1938 Female, age 85, left hemisphere 31.9
2117 Female, age 91, right hemisphere 31.6
1787 Male, age 76, left hemisphere 28.8
2764 Male, age 80, right hemisphere 27.3
2613 Female, age 94, left hemisphere 20.5
Hippocampus, CA1
nTPM: 19.2
2527 Male, age 74, both hemispheres 21.9
1873 Female, age 85, both hemispheres 20.8
2045 Male, age 76, both hemispheres 20.4
2082 Female, age 91, right hemisphere 17.7
2749 Male, age 80, left hemisphere 15.2
Hippocampus, CA2
nTPM: 25.2
1940 Female, age 85, left hemisphere 37.5
1963 Male, age 80, left hemisphere 25.4
2113 Female, age 91, right hemisphere 25.1
2437 Female, age 94, left hemisphere 25.0
2249 Male, age 74, both hemispheres 19.6
1892 Male, age 76, both hemispheres 18.7
Hippocampus, CA3
nTPM: 19.3
1891 Female, age 85, both hemispheres 26.7
2861 Female, age 67, both hemispheres 22.6
1867 Male, age 76, both hemispheres 20.0
2620 Female, age 94, left hemisphere 18.8
2436 Male, age 74, both hemispheres 14.9
2137 Male, age 80, left hemisphere 12.8
Parahippocampal cortex
nTPM: 30.0
2693 Female, age 94, both hemispheres 35.0
1850 Male, age 80, both hemispheres 34.9
2018 Male, age 76, both hemispheres 34.7
2250 Female, age 67, right hemisphere 34.1
1933 Female, age 85, both hemispheres 31.0
1990 Female, age 91, right hemisphere 27.7
2532 Female, age 72, left hemisphere 27.4
2622 Female, age 67, right hemisphere 26.6
2245 Female, age 91, both hemispheres 24.8
2692 Male, age 74, both hemispheres 24.0
Perirhinal gyrus
nTPM: 37.3
1841 Female, age 85, right hemisphere 52.8
1794 Male, age 80, right hemisphere 42.6
2848 Male, age 76, right hemisphere 35.1
1847 Female, age 91, left hemisphere 28.5
2521 Female, age 94, right hemisphere 27.5
Subiculum
nTPM: 22.4
1977 Female, age 85, both hemispheres 34.9
2729 Female, age 91, right hemisphere 25.4
2619 Male, age 74, both hemispheres 23.3
2042 Male, age 76, both hemispheres 20.0
1901 Male, age 80, both hemispheres 15.9
2438 Female, age 94, left hemisphere 15.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 3.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.6
Samples: 197

Max nTPM: 10.0
Min nTPM: 1.4
Std nTPM: 1.4
Median nTPM: 3.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 10.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 8.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 7.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 6.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 6.9
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 6.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 6.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 6.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 6.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 6.4
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 6.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 22.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.6
FF:10169-103B7 60 years, female 24.9
FF:10153-102I9 76 years, female 20.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 32.8
Pig sample Sample description nTPM
Subiculum
nTPM: 29.8
Samples: 4

Max nTPM: 39.6
Min nTPM: 23.3
Sample A Female 39.6
Sample B Female 27.0
Sample C Male 23.3
Sample D Male 29.2
Dorsal hippocampus
nTPM: 20.2
Samples: 4

Max nTPM: 22.1
Min nTPM: 19.5
Sample A Female 19.5
Sample B Female 19.5
Sample C Male 19.8
Sample D Male 22.1
Entorhinal cortex
nTPM: 32.8
Samples: 4

Max nTPM: 35.8
Min nTPM: 27.9
Sample A Female 27.9
Sample B Female 34.2
Sample C Male 35.8
Sample D Male 33.2
Ventral hippocampus
nTPM: 19.1
Samples: 4

Max nTPM: 21.9
Min nTPM: 15.0
Sample A Female 21.9
Sample B Female 18.5
Sample C Male 21.0
Sample D Male 15.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 26.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 26.2
Samples: 4

Max nTPM: 29.0
Min nTPM: 22.0
Sample A Male 26.1
Sample B Male 27.5
Sample C Female 22.0
Sample D Female 29.0
Hippocampal formation
nTPM: 17.7
Samples: 4

Max nTPM: 19.2
Min nTPM: 16.5
Sample A Male 17.2
Sample B Male 18.0
Sample C Female 19.2
Sample D Female 16.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68666667 Antisense, RP_050126_02_G02, Mouse strain C57BL/6J (56 days, male) 0.5

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