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TMEM178A
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  • TMEM178A
TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:114.8 nTPM
HPA Brain:64.8 nTPM
GTEx:114.8 nTPM
FANTOM5:45.8 Scaled Tags Per Million
Pig:8.0 nTPM

SPINAL CORD - Annotated protein expression
Pending normal tissue analysis

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

64.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 52.9
2816 Male, age 47, midline 66.9
2565 Male, age 75, midline 60.0
2194 Female, age 79, both hemispheres 48.4
1981 Female, age 72, midline 45.6
2048 Male, age 55, midline 43.6
Cervical spinal cord, dorsal horn
nTPM: 64.8
2296 Male, age 66, both hemispheres 142.3
2069 Male, age 47, both hemispheres 69.2
2173 Female, age 72, unknown 53.3
1877 Male, age 55, unknown 44.7
2721 Male, age 90, both hemispheres 41.8
2297 Male, age 75, both hemispheres 37.7
Cervical spinal cord, ventral horn
nTPM: 50.8
2480 Male, age 75, both hemispheres 67.5
2068 Male, age 55, unknown 52.4
2809 Male, age 90, both hemispheres 49.0
2098 Female, age 72, unknown 47.8
2295 Male, age 66, both hemispheres 45.4
2820 Female, age 79, both hemispheres 42.5

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

114.8
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 114.8
Samples: 159

Max nTPM: 282.8
Min nTPM: 48.8
Std nTPM: 47.2
Median nTPM: 104.2
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 282.8
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 258.1
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 238.7
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 238.1
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 236.3
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 236.3
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 226.4
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 224.8
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 217.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 213.9
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 209.4
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 195.9
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 186.1
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 183.6
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 183.3
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 180.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 178.7
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 177.3
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 176.4
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 175.2
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 168.0
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 163.2
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 162.8
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 162.3
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 160.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 158.5
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 158.2
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 153.9
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 153.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 152.2
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 149.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 147.7
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 146.1
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 145.3
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 144.6
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 144.1
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 143.0
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 142.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 141.9
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 140.0
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 139.2
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 137.9
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 137.8
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 135.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 133.0
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 132.4
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 129.8
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 129.6
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 128.3
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 125.7
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 124.8
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 122.7
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 121.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 119.2
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 118.2
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 118.1
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 117.7
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 117.5
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 117.4
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 116.3
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 116.1
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 115.8
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 115.7
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 115.0
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 113.7
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 113.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 111.6
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 111.1
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 111.1
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 111.0
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 111.0
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 110.6
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 110.3
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 109.3
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 108.2
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 105.4
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 104.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 104.9
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 104.7
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 104.2
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 104.1
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 103.0
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 102.9
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 102.1
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 101.5
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 101.5
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 100.9
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 99.5
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 99.5
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 98.6
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 98.2
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 97.3
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 97.0
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 95.9
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 95.9
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 95.5
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 95.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 94.6
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 94.1
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 93.0
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 92.9
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 92.9
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 91.0
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 90.7
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 89.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 89.6
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 88.9
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 88.7
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 88.5
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 86.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 86.2
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 84.8
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 84.2
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 82.8
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 82.3
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 82.1
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 82.1
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 82.0
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 81.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 81.1
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 80.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 80.4
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 78.8
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 78.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 77.9
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 77.6
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 77.4
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 72.9
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 72.5
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 71.9
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 71.6
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 71.3
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 70.2
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 68.7
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 68.3
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 68.3
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 67.7
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 67.0
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 66.2
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 65.2
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 65.0
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 64.6
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 64.3
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 64.2
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 63.6
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 62.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 61.2
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 59.7
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 58.6
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 58.1
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 57.2
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 57.2
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 56.8
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 56.2
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 56.2
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 55.7
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 55.7
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 52.2
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 48.8
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

45.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 45.8
FF:10159-103A6 76 years, female 53.3
FF:10181-103D1 60 years, female 38.3

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

8.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 7.6
Samples: 4

Max nTPM: 10.8
Min nTPM: 3.4
Sample A Female 10.8
Sample B Female 5.2
Sample C Male 3.4
Sample D Male 10.8
Ventral spinal cord
nTPM: 8.0
Samples: 4

Max nTPM: 9.2
Min nTPM: 6.5
Sample A Female 9.2
Sample B Female 8.2
Sample C Male 8.1
Sample D Male 6.5

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