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GRID2
HPA
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  • GRID2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

GRID2
Synonyms GluD2, GluR-delta-2
Gene descriptioni

Full gene name according to HGNC.

Glutamate ionotropic receptor delta type subunit 2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 4
Cytoband
Chromosome location (bp) 92303966 - 93810157
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

5
Ensembl ENSG00000152208 (version 109)
Entrez gene 2895
HGNC HGNC:4576
UniProt O43424 (UniProt - Evidence at protein level)
neXtProt NX_O43424
GeneCards GRID2
Antibodypedia GRID2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Receptor for glutamate. L-glutamate acts as an excitatory neurotransmitter at many synapses in the central nervous system. The postsynaptic actions of Glu are mediated by a variety of receptors that are named according to their selective agonists. Promotes synaptogenesis and mediates the D-Serine-dependent long term depression signals and AMPA receptor endocytosis of cerebellar parallel fiber-Purkinje cell (PF-PC) synapses through the beta-NRX1-CBLN1-GRID2 triad complex 1.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Ion channel, Ligand-gated ion channel, Receptor
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Ion transport, Transport
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is a member of the family of ionotropic glutamate receptors which are the predominant excitatory neurotransmitter receptors in the mammalian brain. The encoded protein is a multi-pass membrane protein that is expressed selectively in cerebellar Purkinje cells. A point mutation in the mouse ortholog, associated with the phenotype named 'lurcher', in the heterozygous state leads to ataxia resulting from selective, cell-autonomous apoptosis of cerebellar Purkinje cells during postnatal development. Mice homozygous for this mutation die shortly after birth from massive loss of mid- and hindbrain neurons during late embryogenesis. This protein also plays a role in synapse organization between parallel fibers and Purkinje cells. Alternate splicing results in multiple transcript variants encoding distinct isoforms. Mutations in this gene cause cerebellar ataxia in humans. [provided by RefSeq, Apr 2014]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
GRID2-201
ENSP00000282020
ENST00000282020
O43424
[Direct mapping] Glutamate receptor ionotropic, delta-2
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   3TM proteins predicted by MDM
Disease related genes
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0004970 [ionotropic glutamate receptor activity]
GO:0005216 [ion channel activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0007157 [heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules]
GO:0007215 [glutamate receptor signaling pathway]
GO:0008066 [glutamate receptor activity]
GO:0008104 [protein localization]
GO:0008328 [ionotropic glutamate receptor complex]
GO:0010975 [regulation of neuron projection development]
GO:0015276 [ligand-gated ion channel activity]
GO:0016020 [membrane]
GO:0021707 [cerebellar granule cell differentiation]
GO:0030165 [PDZ domain binding]
GO:0034220 [ion transmembrane transport]
GO:0035235 [ionotropic glutamate receptor signaling pathway]
GO:0035249 [synaptic transmission, glutamatergic]
GO:0036477 [somatodendritic compartment]
GO:0038023 [signaling receptor activity]
GO:0043197 [dendritic spine]
GO:0043523 [regulation of neuron apoptotic process]
GO:0045202 [synapse]
GO:0045211 [postsynaptic membrane]
GO:0050804 [modulation of chemical synaptic transmission]
GO:0051965 [positive regulation of synapse assembly]
GO:0060079 [excitatory postsynaptic potential]
GO:0060134 [prepulse inhibition]
GO:0097110 [scaffold protein binding]
GO:0098688 [parallel fiber to Purkinje cell synapse]
GO:0098839 [postsynaptic density membrane]
GO:0098978 [glutamatergic synapse]
GO:0099151 [regulation of postsynaptic density assembly]
GO:1900454 [positive regulation of long-term synaptic depression]
GO:1904315 [transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential]
GO:1904861 [excitatory synapse assembly]
Show all
1007 aa
113.4 kDa
Yes 3
GRID2-204
ENSP00000421257
ENST00000510992
O43424
[Direct mapping] Glutamate receptor ionotropic, delta-2
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   3TM proteins predicted by MDM
Disease related genes
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0004970 [ionotropic glutamate receptor activity]
GO:0005216 [ion channel activity]
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0007157 [heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules]
GO:0007215 [glutamate receptor signaling pathway]
GO:0008066 [glutamate receptor activity]
GO:0008104 [protein localization]
GO:0008328 [ionotropic glutamate receptor complex]
GO:0015276 [ligand-gated ion channel activity]
GO:0016020 [membrane]
GO:0021707 [cerebellar granule cell differentiation]
GO:0030165 [PDZ domain binding]
GO:0034220 [ion transmembrane transport]
GO:0035235 [ionotropic glutamate receptor signaling pathway]
GO:0035249 [synaptic transmission, glutamatergic]
GO:0038023 [signaling receptor activity]
GO:0043197 [dendritic spine]
GO:0043523 [regulation of neuron apoptotic process]
GO:0045202 [synapse]
GO:0045211 [postsynaptic membrane]
GO:0050804 [modulation of chemical synaptic transmission]
GO:0051965 [positive regulation of synapse assembly]
GO:0060079 [excitatory postsynaptic potential]
GO:0060134 [prepulse inhibition]
GO:0097110 [scaffold protein binding]
GO:1900454 [positive regulation of long-term synaptic depression]
GO:1904315 [transmitter-gated ion channel activity involved in regulation of postsynaptic membrane potential]
GO:1904861 [excitatory synapse assembly]
Show all
912 aa
102.8 kDa
Yes 3
GRID2-205
ENSP00000423331
ENST00000512631
D6R976
[Direct mapping] Glutamate receptor ionotropic, delta-2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
Show all
GO:0016020 [membrane]
Show all
73 aa
8.1 kDa
No 0
GRID2-208
ENSP00000483084
ENST00000611049
A0A087X043
[Direct mapping] Glutamate receptor
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   3TM proteins predicted by MDM
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
   DeepTMHMM predicted membrane proteins
Show all
GO:0004970 [ionotropic glutamate receptor activity]
GO:0005216 [ion channel activity]
GO:0005886 [plasma membrane]
GO:0006811 [ion transport]
GO:0007215 [glutamate receptor signaling pathway]
GO:0015276 [ligand-gated ion channel activity]
GO:0016020 [membrane]
GO:0034220 [ion transmembrane transport]
GO:0035235 [ionotropic glutamate receptor signaling pathway]
GO:0038023 [signaling receptor activity]
GO:0045202 [synapse]
GO:0045211 [postsynaptic membrane]
Show all
926 aa
104.2 kDa
No 3
GRID2-209
ENSP00000490775
ENST00000637838
A0A1B0GW49
[Direct mapping] Glutamate receptor ionotropic, delta-2
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Human disease related genes
   Nervous system diseases
   Neurodegenerative diseases
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
Show all
126 aa
13.9 kDa
No 1

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