HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.0 nTPM
HPA Brain:41.6 nTPM
GTEx:13.0 nTPM
FANTOM5:56.6 Scaled Tags Per Million
Pig:51.9 nTPM
Mouse:4.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 41.6
Sample id Sample description nTPM
Hippocampus
nTPM: 30.0
1898 Male, age 80, left hemisphere 52.3
1911 Female, age 85, right hemisphere 33.4
1855 Male, age 76, left hemisphere 30.6
2621 Female, age 67, right hemisphere 29.2
2529 Female, age 94, left hemisphere 22.6
2148 Female, age 91, left hemisphere 12.1
Dentate gyrus
nTPM: 23.0
2010 Male, age 76, both hemispheres 31.6
1927 Female, age 91, both hemispheres 29.7
2246 Female, age 85, both hemispheres 29.0
2530 Female, age 94, left hemisphere 26.3
2528 Male, age 74, both hemispheres 14.0
2531 Female, age 67, both hemispheres 7.6
Entorhinal gyrus
nTPM: 29.1
1787 Male, age 76, left hemisphere 36.3
2613 Female, age 94, left hemisphere 36.2
2764 Male, age 80, right hemisphere 36.1
1938 Female, age 85, left hemisphere 31.4
2686 Male, age 75, right hemisphere 17.7
2117 Female, age 91, right hemisphere 17.0
Hippocampus, CA1
nTPM: 41.6
2749 Male, age 80, left hemisphere 101.1
2082 Female, age 91, right hemisphere 34.1
2527 Male, age 74, both hemispheres 30.7
1873 Female, age 85, both hemispheres 28.2
2045 Male, age 76, both hemispheres 13.9
Hippocampus, CA2
nTPM: 37.3
1892 Male, age 76, both hemispheres 50.0
1963 Male, age 80, left hemisphere 40.9
1940 Female, age 85, left hemisphere 36.2
2249 Male, age 74, both hemispheres 36.1
2113 Female, age 91, right hemisphere 32.2
2437 Female, age 94, left hemisphere 28.6
Hippocampus, CA3
nTPM: 38.2
2137 Male, age 80, left hemisphere 96.3
1867 Male, age 76, both hemispheres 47.7
2436 Male, age 74, both hemispheres 40.2
1891 Female, age 85, both hemispheres 27.2
2861 Female, age 67, both hemispheres 14.1
2620 Female, age 94, left hemisphere 3.6
Parahippocampal cortex
nTPM: 30.6
1850 Male, age 80, both hemispheres 42.0
2018 Male, age 76, both hemispheres 40.8
2245 Female, age 91, both hemispheres 37.6
2250 Female, age 67, right hemisphere 35.1
1933 Female, age 85, both hemispheres 32.1
1990 Female, age 91, right hemisphere 30.3
2693 Female, age 94, both hemispheres 26.4
2532 Female, age 72, left hemisphere 24.7
2622 Female, age 67, right hemisphere 20.7
2692 Male, age 74, both hemispheres 16.1
Perirhinal gyrus
nTPM: 40.2
1847 Female, age 91, left hemisphere 52.0
2521 Female, age 94, right hemisphere 47.7
1794 Male, age 80, right hemisphere 40.5
1841 Female, age 85, right hemisphere 34.2
2848 Male, age 76, right hemisphere 26.5
Subiculum
nTPM: 32.9
1901 Male, age 80, both hemispheres 57.2
2438 Female, age 94, left hemisphere 36.3
2042 Male, age 76, both hemispheres 36.2
1977 Female, age 85, both hemispheres 32.8
2619 Male, age 74, both hemispheres 22.7
2729 Female, age 91, right hemisphere 12.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 13.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.0
Samples: 197

Max nTPM: 48.3
Min nTPM: 1.7
Std nTPM: 8.1
Median nTPM: 11.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 48.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 40.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 33.5
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 33.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 31.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 31.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 30.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 29.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 29.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 28.5
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 28.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 56.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.6
FF:10169-103B7 60 years, female 76.8
FF:10153-102I9 76 years, female 36.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 51.9
Pig sample Sample description nTPM
Subiculum
nTPM: 25.4
Samples: 4

Max nTPM: 29.7
Min nTPM: 20.0
Sample A Female 29.7
Sample B Female 20.0
Sample C Male 27.9
Sample D Male 24.1
Dorsal hippocampus
nTPM: 51.9
Samples: 4

Max nTPM: 68.8
Min nTPM: 30.5
Sample A Female 68.8
Sample B Female 52.9
Sample C Male 55.2
Sample D Male 30.5
Entorhinal cortex
nTPM: 22.7
Samples: 4

Max nTPM: 26.0
Min nTPM: 19.3
Sample A Female 20.0
Sample B Female 19.3
Sample C Male 26.0
Sample D Male 25.4
Ventral hippocampus
nTPM: 38.1
Samples: 4

Max nTPM: 60.8
Min nTPM: 23.4
Sample A Female 40.8
Sample B Female 23.4
Sample C Male 27.5
Sample D Male 60.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 4.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.9
Samples: 4

Max nTPM: 3.8
Min nTPM: 2.1
Sample A Male 3.8
Sample B Male 3.1
Sample C Female 2.6
Sample D Female 2.1
Hippocampal formation
nTPM: 4.1
Samples: 4

Max nTPM: 4.1
Min nTPM: 3.9
Sample A Male 4.1
Sample B Male 4.1
Sample C Female 4.1
Sample D Female 3.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74657930 Antisense, RP_060220_02_F09, Mouse strain C57BL/6J (56 days, male) 0.2
68918994 Antisense, RP_050301_02_C12, Mouse strain C57BL/6J (56 days, male) 0.1

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