HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:41.7 nTPM
HPA Brain:61.7 nTPM
GTEx:41.7 nTPM
FANTOM5:78.2 Scaled Tags Per Million
Pig:103.6 nTPM
Mouse:278.0 nTPM
Allen mouse:20.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002117
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 61.7
Sample id Sample description nTPM
Hippocampus
nTPM: 49.5
1898 Male, age 80, left hemisphere 86.9
2529 Female, age 94, left hemisphere 46.6
2148 Female, age 91, left hemisphere 46.5
2621 Female, age 67, right hemisphere 43.8
1855 Male, age 76, left hemisphere 36.9
1911 Female, age 85, right hemisphere 36.2
Dentate gyrus
nTPM: 43.4
1927 Female, age 91, both hemispheres 61.2
2010 Male, age 76, both hemispheres 51.8
2528 Male, age 74, both hemispheres 45.2
2246 Female, age 85, both hemispheres 38.3
2530 Female, age 94, left hemisphere 37.3
2531 Female, age 67, both hemispheres 26.7
Entorhinal gyrus
nTPM: 47.1
2764 Male, age 80, right hemisphere 60.1
1938 Female, age 85, left hemisphere 57.5
2117 Female, age 91, right hemisphere 51.3
1787 Male, age 76, left hemisphere 46.9
2613 Female, age 94, left hemisphere 36.1
2686 Male, age 75, right hemisphere 30.9
Hippocampus, CA1
nTPM: 59.7
2749 Male, age 80, left hemisphere 116.0
2527 Male, age 74, both hemispheres 61.0
1873 Female, age 85, both hemispheres 49.8
2082 Female, age 91, right hemisphere 40.2
2045 Male, age 76, both hemispheres 31.5
Hippocampus, CA2
nTPM: 54.3
1892 Male, age 76, both hemispheres 86.5
1963 Male, age 80, left hemisphere 69.4
2249 Male, age 74, both hemispheres 57.1
1940 Female, age 85, left hemisphere 40.7
2113 Female, age 91, right hemisphere 38.7
2437 Female, age 94, left hemisphere 33.4
Hippocampus, CA3
nTPM: 52.9
1867 Male, age 76, both hemispheres 72.2
2137 Male, age 80, left hemisphere 68.0
2436 Male, age 74, both hemispheres 57.7
1891 Female, age 85, both hemispheres 45.5
2620 Female, age 94, left hemisphere 41.4
2861 Female, age 67, both hemispheres 32.7
Parahippocampal cortex
nTPM: 49.3
1850 Male, age 80, both hemispheres 66.5
1990 Female, age 91, right hemisphere 64.7
1933 Female, age 85, both hemispheres 56.3
2245 Female, age 91, both hemispheres 52.9
2250 Female, age 67, right hemisphere 48.5
2692 Male, age 74, both hemispheres 47.4
2622 Female, age 67, right hemisphere 43.3
2018 Male, age 76, both hemispheres 39.9
2532 Female, age 72, left hemisphere 36.7
2693 Female, age 94, both hemispheres 36.7
Perirhinal gyrus
nTPM: 61.7
1847 Female, age 91, left hemisphere 88.6
1794 Male, age 80, right hemisphere 73.1
1841 Female, age 85, right hemisphere 56.4
2521 Female, age 94, right hemisphere 49.8
2848 Male, age 76, right hemisphere 40.7
Subiculum
nTPM: 49.3
1901 Male, age 80, both hemispheres 59.0
2438 Female, age 94, left hemisphere 58.0
1977 Female, age 85, both hemispheres 56.1
2619 Male, age 74, both hemispheres 48.8
2729 Female, age 91, right hemisphere 42.6
2042 Male, age 76, both hemispheres 31.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 41.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.7
Samples: 197

Max nTPM: 90.5
Min nTPM: 7.5
Std nTPM: 17.7
Median nTPM: 40.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 90.5
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 88.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 86.2
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 85.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 85.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 84.8
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 83.8
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 77.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 77.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 75.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 72.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 78.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 78.2
FF:10169-103B7 60 years, female 91.3
FF:10153-102I9 76 years, female 65.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 103.6
Pig sample Sample description nTPM
Subiculum
nTPM: 91.2
Samples: 4

Max nTPM: 110.7
Min nTPM: 78.3
Sample A Female 110.7
Sample B Female 82.7
Sample C Male 93.0
Sample D Male 78.3
Dorsal hippocampus
nTPM: 97.2
Samples: 4

Max nTPM: 117.1
Min nTPM: 76.1
Sample A Female 117.1
Sample B Female 98.2
Sample C Male 97.2
Sample D Male 76.1
Entorhinal cortex
nTPM: 103.6
Samples: 4

Max nTPM: 123.8
Min nTPM: 88.5
Sample A Female 104.9
Sample B Female 123.8
Sample C Male 97.3
Sample D Male 88.5
Ventral hippocampus
nTPM: 101.9
Samples: 4

Max nTPM: 125.8
Min nTPM: 74.8
Sample A Female 105.4
Sample B Female 74.8
Sample C Male 125.8
Sample D Male 101.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 278.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 278.0
Samples: 4

Max nTPM: 281.1
Min nTPM: 274.1
Sample A Male 281.1
Sample B Male 276.9
Sample C Female 274.1
Sample D Female 279.8
Hippocampal formation
nTPM: 254.2
Samples: 4

Max nTPM: 263.8
Min nTPM: 242.7
Sample A Male 250.0
Sample B Male 242.7
Sample C Female 263.8
Sample D Female 260.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 20.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.9
67870466 Antisense, RP_041018_01_D08, Mouse strain C57BL/6J (56 days, male) 24.3
75694394 Antisense, RP_060518_03_F09, Mouse strain C57BL/6J (56 days, male) 17.6

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