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SPEF2
HPA
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  • SUMMARY

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  • SPEF2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SPEF2
Synonyms CT122, FLJ23577, KPL2
Gene descriptioni

Full gene name according to HGNC.

Sperm flagellar 2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 5
Cytoband p13.2
Chromosome location (bp) 35617844 - 35814611
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000152582 (version 109)
Entrez gene 79925
HGNC HGNC:26293
UniProt Q9C093 (UniProt - Evidence at protein level)
neXtProt NX_Q9C093
GeneCards SPEF2
Antibodypedia SPEF2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Required for correct axoneme development in spermatozoa. Important for normal development of the manchette and sperm head morphology. Essential for male fertility. Plays a role in localization of the intraflagellar transport protein IFT20 to the manchette, suggesting function as an adapter for dynein-mediated protein transport during spermatogenesis 1, 2, 3. Also plays a role in bone growth where it seems to be required for normal osteoblast differentiation (By similarity).... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Differentiation, Spermatogenesis
Gene summary (Entrez)i

Useful information about the gene from Entrez

Involved in sperm axoneme assembly. Located in sperm flagellum. Implicated in spermatogenic failure 43. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SPEF2-201
ENSP00000282469
ENST00000282469
Q9C093
[Direct mapping] Sperm flagellar protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0002177 [manchette]
GO:0003351 [epithelial cilium movement involved in extracellular fluid movement]
GO:0003674 [molecular_function]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005929 [cilium]
GO:0007283 [spermatogenesis]
GO:0007288 [sperm axoneme assembly]
GO:0030154 [cell differentiation]
GO:0031514 [motile cilium]
GO:0036126 [sperm flagellum]
GO:0042995 [cell projection]
GO:0048705 [skeletal system morphogenesis]
GO:0048854 [brain morphogenesis]
GO:0060541 [respiratory system development]
GO:0097225 [sperm midpiece]
GO:0110165 [cellular anatomical entity]
Show all
514 aa
61.2 kDa
No 0
SPEF2-202
ENSP00000348314
ENST00000356031
Q9C093
[Direct mapping] Sperm flagellar protein 2
Show all
A0A140VKD0
[Target identity:100%; Query identity:100%] Testis tissue sperm-binding protein Li 47a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0002177 [manchette]
GO:0003351 [epithelial cilium movement involved in extracellular fluid movement]
GO:0003674 [molecular_function]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005929 [cilium]
GO:0007283 [spermatogenesis]
GO:0007288 [sperm axoneme assembly]
GO:0030154 [cell differentiation]
GO:0031514 [motile cilium]
GO:0036126 [sperm flagellum]
GO:0042995 [cell projection]
GO:0048705 [skeletal system morphogenesis]
GO:0048854 [brain morphogenesis]
GO:0060541 [respiratory system development]
GO:0097225 [sperm midpiece]
GO:0110165 [cellular anatomical entity]
Show all
1822 aa
209.8 kDa
No 0
SPEF2-203
ENSP00000412125
ENST00000440995
Q9C093
[Direct mapping] Sperm flagellar protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0002177 [manchette]
GO:0003351 [epithelial cilium movement involved in extracellular fluid movement]
GO:0003674 [molecular_function]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005929 [cilium]
GO:0007283 [spermatogenesis]
GO:0007288 [sperm axoneme assembly]
GO:0030154 [cell differentiation]
GO:0031514 [motile cilium]
GO:0036126 [sperm flagellum]
GO:0042995 [cell projection]
GO:0048705 [skeletal system morphogenesis]
GO:0048854 [brain morphogenesis]
GO:0060541 [respiratory system development]
GO:0097225 [sperm midpiece]
GO:0110165 [cellular anatomical entity]
Show all
1818 aa
209.3 kDa
No 0
SPEF2-211
ENSP00000421593
ENST00000509059
D6REZ4
[Direct mapping] Sperm flagellar protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
GO:0005515 [protein binding]
GO:0110165 [cellular anatomical entity]
Show all
943 aa
108.5 kDa
No 0
SPEF2-212
ENSP00000426259
ENST00000510777
D6RGZ5
[Direct mapping] Sperm flagellar protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
GO:0005515 [protein binding]
GO:0110165 [cellular anatomical entity]
Show all
240 aa
27.4 kDa
No 0
SPEF2-216
ENSP00000490886
ENST00000637569
A0A1B0GWD8
[Direct mapping] Sperm flagellar protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Show all
GO:0005515 [protein binding]
GO:0110165 [cellular anatomical entity]
Show all
2169 aa
249.1 kDa
No 0

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