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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:451.2 nTPM
GTEx:451.2 nTPM
FANTOM5:918.3 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB026225
Squamous epithelial cells Medium



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

451.2
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 451.2
Samples: 156

Max nTPM: 1721.0
Min nTPM: 85.4
Std nTPM: 305.2
Median nTPM: 360.3
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 1721.0
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 1588.0
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 1553.3
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 1198.3
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 1169.7
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 1157.7
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 1109.7
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 1107.7
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 1071.2
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 1034.3
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 1028.0
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 1019.0
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 937.9
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 937.7
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 912.0
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 880.3
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 874.0
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 857.7
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 825.8
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 825.3
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 817.9
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 814.2
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 811.2
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 799.8
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 763.9
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 728.5
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 672.9
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 655.6
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 631.3
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 627.9
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 624.6
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 622.2
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 615.9
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 609.0
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 594.8
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 562.2
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 560.2
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 559.8
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 554.4
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 535.4
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 535.1
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 529.1
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 517.5
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 515.1
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 508.6
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 507.1
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 506.7
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 501.2
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 500.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 497.5
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 479.2
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 472.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 468.5
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 467.7
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 463.8
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 461.1
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 456.8
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 453.3
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 446.3
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 437.9
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 433.6
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 432.1
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 422.3
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 417.3
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 411.9
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 411.1
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 410.5
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 405.7
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 403.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 399.1
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 396.5
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 390.3
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 384.8
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 379.8
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 371.2
GTEX-16NPV-2526-SM-6M483 50-59 years, female 367.5
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 364.6
GTEX-1C475-0526-SM-793AC 40-49 years, female 363.4
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 357.2
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 356.3
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 350.6
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 348.3
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 343.2
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 341.2
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 334.6
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 333.9
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 326.4
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 318.6
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 318.2
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 314.3
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 313.0
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 312.1
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 310.6
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 309.4
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 303.3
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 302.9
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 296.8
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 296.5
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 292.5
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 289.9
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 289.4
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 287.0
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 286.2
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 286.1
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 281.9
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 281.3
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 277.4
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 272.3
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 269.9
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 269.4
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 260.3
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 256.5
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 255.9
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 255.6
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 253.4
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 246.6
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 243.2
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 240.8
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 239.9
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 238.7
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 237.6
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 233.9
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 232.7
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 228.7
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 224.9
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 222.3
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 215.6
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 215.0
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 214.0
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 204.3
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 199.1
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 192.0
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 189.2
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 183.9
GTEX-14PKU-1326-SM-6871B 40-49 years, female 177.1
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 173.9
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 172.9
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 172.6
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 171.4
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 170.2
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 167.0
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 160.9
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 155.2
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 154.0
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 146.3
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 145.2
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 143.8
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 142.1
GTEX-S341-1226-SM-4AD5S 40-49 years, female 140.7
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 140.6
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 128.9
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 126.7
GTEX-11I78-2026-SM-5987C 50-59 years, female 102.4
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 95.5
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 93.8
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 85.4
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

918.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 918.3
FF:10204-103F6 68 years, female 918.3

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