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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:111.8 nTPM
HPA Brain:93.4 nTPM
GTEx:111.8 nTPM
FANTOM5:150.3 Scaled Tags Per Million
Pig:19.8 nTPM
Mouse:105.7 nTPM
Allen mouse:1.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051911
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 59.9
1857 Female, age 85, left hemisphere 102.7
1854 Male, age 80, left hemisphere 70.3
1781 Male, age 74, unknown 64.9
2290 Female, age 72, unknown 61.2
2289 Male, age 61, right hemisphere 55.0
2846 Female, age 79, unknown 53.7
2481 Female, age 94, left hemisphere 38.1
2288 Male, age 75, left hemisphere 33.2
Globus pallidus, externus
nTPM: 42.4
2646 Male, age 61, right hemisphere 48.5
1996 Male, age 80, right hemisphere 46.9
2567 Female, age 72, unknown 46.5
2772 Female, age 79, unknown 37.8
2395 Male, age 75, both hemispheres 32.5
Globus pallidus, internus
nTPM: 41.9
2111 Female, age 85, right hemisphere 50.6
2566 Female, age 72, unknown 49.2
2483 Female, age 94, right hemisphere 42.9
2778 Female, age 91, both hemispheres 41.7
2287 Male, age 75, right hemisphere 38.5
2037 Male, age 80, right hemisphere 36.8
1818 Male, age 74, unknown 33.5
Nucleus accumbens
nTPM: 93.4
1783 Male, age 74, unknown 139.8
1806 Female, age 85, left hemisphere 133.8
1856 Female, age 91, right hemisphere 123.7
2824 Male, age 61, right hemisphere 113.1
2698 Female, age 72, unknown 96.0
2732 Male, age 80, right hemisphere 65.9
2286 Male, age 75, left hemisphere 39.6
2391 Female, age 94, left hemisphere 35.0
Nucleus basalis of Meynert
nTPM: 45.2
2569 Male, age 61, both hemispheres 54.8
2393 Male, age 80, right hemisphere 46.8
2484 Female, age 94, left hemisphere 45.5
2821 Male, age 75, both hemispheres 33.7
Nucleus of the diagonal band
nTPM: 31.1
1979 Male, age 74, unknown 37.8
1812 Female, age 91, both hemispheres 33.6
2195 Female, age 85, both hemispheres 33.4
2029 Male, age 61, right hemisphere 27.6
2775 Male, age 80, right hemisphere 22.9
Putamen
nTPM: 51.5
1838 Male, age 80, right hemisphere 70.6
1937 Female, age 91, right hemisphere 69.2
2489 Female, age 72, unknown 47.5
2466 Female, age 79, unknown 46.5
1829 Male, age 74, unknown 46.1
2647 Male, age 75, left hemisphere 42.2
2482 Female, age 94, left hemisphere 38.6
Septal nuclei
nTPM: 33.9
2394 Male, age 61, left hemisphere 43.7
2059 Female, age 85, both hemispheres 43.4
1960 Male, age 74, unknown 40.9
2629 Female, age 94, right hemisphere 28.6
2009 Female, age 91, both hemispheres 28.4
2199 Male, age 80, right hemisphere 26.1
2031 Female, age 72, unknown 26.0
Stria terminalis, bed nucleus
nTPM: 33.0
2486 Female, age 94, both hemispheres 34.0
1974 Female, age 91, both hemispheres 33.7
2201 Male, age 74, unknown 31.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

111.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 50.4
Samples: 246

Max nTPM: 141.3
Min nTPM: 10.1
Std nTPM: 15.9
Median nTPM: 47.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 141.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 139.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 101.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 94.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 93.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 91.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 87.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 87.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 85.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 83.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 81.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 80.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 80.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 80.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 80.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 79.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 79.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 77.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 76.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 72.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 70.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 69.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 69.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 67.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 66.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 66.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 66.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 65.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 65.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 65.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 65.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 65.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 65.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 63.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 63.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 63.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 61.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 61.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 61.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 60.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 60.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 60.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 59.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 59.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 59.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 58.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 58.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 58.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 58.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 58.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 57.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 57.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 57.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 57.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 57.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 56.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 56.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 56.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 56.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 56.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 56.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 55.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 55.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 55.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 55.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 55.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 55.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 54.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 54.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 54.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 54.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 54.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 54.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 54.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 54.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 54.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 54.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 54.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 53.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 53.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 53.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 53.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 53.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 53.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 53.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 53.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 53.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 53.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 52.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 52.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 52.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 52.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 52.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 52.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 52.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 51.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 51.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 51.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 51.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 50.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 50.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 50.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 50.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 50.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 49.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 49.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 49.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 49.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 49.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 49.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 48.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 48.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 48.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 48.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 48.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 48.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 48.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 48.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 48.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 48.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 47.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 47.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 47.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 47.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 47.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 47.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 47.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 46.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 46.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 46.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 46.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 46.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 46.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 46.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 46.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 46.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 46.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 46.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 46.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 46.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 46.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 46.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 46.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 46.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 45.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 45.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 45.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 45.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 45.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 45.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 45.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 45.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 45.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 45.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 44.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 44.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 44.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 44.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 43.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 43.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 43.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 43.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 43.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 43.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 43.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 43.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 43.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 42.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 42.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 42.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 42.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 42.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 41.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 41.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 41.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 41.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 41.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 41.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 41.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 41.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 41.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 41.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 41.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 40.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 40.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 40.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 40.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 40.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 40.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 39.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 39.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 39.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 39.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 39.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 39.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 39.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 38.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 38.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 38.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 38.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 38.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 38.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 38.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 38.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 38.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 37.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 37.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 37.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 37.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 36.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 36.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 36.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 36.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 36.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 36.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 36.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 35.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 35.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 34.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 34.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 34.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 34.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 34.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 34.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 33.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 33.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 33.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 33.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 32.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 32.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 32.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 32.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 31.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 31.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 31.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 31.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 30.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 30.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 29.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 29.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 29.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 28.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 28.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 27.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 25.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 10.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 111.8
Samples: 246

Max nTPM: 234.1
Min nTPM: 28.4
Std nTPM: 44.2
Median nTPM: 107.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 234.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 230.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 222.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 215.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 212.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 208.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 204.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 198.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 193.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 188.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 187.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 187.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 185.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 184.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 180.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 178.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 178.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 177.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 176.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 176.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 173.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 173.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 172.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 170.9
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 167.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 167.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 167.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 167.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 167.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 166.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 165.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 165.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 164.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 164.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 162.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 160.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 159.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 159.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 158.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 158.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 157.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 157.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 156.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 156.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 155.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 154.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 153.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 153.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 153.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 152.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 150.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 150.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 149.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 149.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 148.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 146.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 145.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 144.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 144.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 144.5
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 144.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 144.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 143.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 142.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 142.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 142.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 142.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 141.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 141.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 141.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 140.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 140.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 139.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 139.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 139.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 138.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 138.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 137.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 137.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 137.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 136.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 135.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 135.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 132.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 132.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 132.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 131.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 130.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 130.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 130.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 130.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 129.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 127.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 125.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 125.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 125.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 124.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 124.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 123.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 123.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 123.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 123.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 120.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 120.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 120.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 120.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 119.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 118.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 117.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 116.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 115.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 115.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 115.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 115.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 114.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 113.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 113.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 113.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 112.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 109.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 108.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 108.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 107.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 106.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 106.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 106.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 105.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 104.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 103.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 102.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 102.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 101.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 99.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 99.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 99.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 99.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 99.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 98.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 98.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 96.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 96.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 96.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 95.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 95.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 95.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 93.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 92.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 92.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 92.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 92.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 92.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 92.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 91.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 91.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 90.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 90.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 90.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 90.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 89.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 89.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 88.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 88.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 88.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 85.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 84.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 84.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 84.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 84.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 84.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 83.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 82.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 82.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 81.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 81.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 81.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 80.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 80.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 80.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 80.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 79.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 79.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 78.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 78.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 77.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 77.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 76.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 75.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 74.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 74.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 73.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 73.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 72.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 72.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 72.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 72.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 71.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 71.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 71.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 69.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 68.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 68.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 68.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 67.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 67.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 67.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 67.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 66.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 65.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 65.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 64.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 63.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 63.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 62.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 61.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 61.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 60.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 60.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 60.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 59.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 58.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 56.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 55.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 53.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 53.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 52.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 52.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 51.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 50.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 49.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 48.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 48.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 48.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 44.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 44.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 43.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 42.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 41.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 39.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 39.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 38.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 38.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 38.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 35.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 35.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 31.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 28.4
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Brain - Putamen (basal ganglia)
Average nTPM: 55.4
Samples: 205

Max nTPM: 144.1
Min nTPM: 26.5
Std nTPM: 17.4
Median nTPM: 51.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 144.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 123.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 116.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 105.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 104.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 103.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 101.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 96.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 94.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 89.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 85.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 84.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 83.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 83.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 81.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 81.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 79.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 79.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 77.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 76.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 76.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 76.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 75.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 75.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 75.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 74.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 73.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 73.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 72.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 72.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 72.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 70.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 70.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 70.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 69.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 69.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 67.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 66.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 65.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 64.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 64.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 64.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 64.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 63.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 63.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 63.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 63.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 62.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 62.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 62.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 62.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 61.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 61.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 61.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 61.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 60.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 60.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 60.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 59.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 59.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 59.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 59.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 59.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 58.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 58.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 58.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 58.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 58.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 57.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 57.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 57.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 57.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 57.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 57.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 57.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 56.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 56.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 56.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 55.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 55.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 54.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 54.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 54.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 54.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 54.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 53.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 53.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 53.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 53.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 53.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 53.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 53.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 53.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 52.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 52.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 52.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 52.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 52.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 52.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 52.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 52.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 51.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 51.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 51.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 51.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 51.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 51.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 51.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 50.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 50.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 50.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 50.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 50.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 50.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 50.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 50.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 49.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 49.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 49.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 49.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 49.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 49.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 49.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 48.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 48.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 48.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 48.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 48.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 48.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 48.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 47.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 47.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 47.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 47.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 47.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 46.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 46.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 46.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 45.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 45.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 45.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 45.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 45.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 45.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 45.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 45.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 45.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 45.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 45.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 44.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 44.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 44.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 44.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 44.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 44.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 44.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 43.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 43.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 43.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 43.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 43.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 43.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 42.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 42.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 42.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 41.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 41.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 41.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 41.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 41.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 41.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 41.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 41.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 40.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 40.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 40.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 40.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 40.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 39.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 39.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 39.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 38.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 38.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 38.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 38.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 38.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 37.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 35.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 35.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 35.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 35.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 35.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 34.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 34.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 34.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 34.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 33.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 33.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 32.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 32.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 32.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 32.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 31.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 29.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 26.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

150.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 133.4
FF:10164-103B2 76 years, female 133.4
Nucleus accumbens
Scaled Tags Per Million: 60.4
FF:10037-101F1 23-56 years, mixed 60.4
Putamen
Scaled Tags Per Million: 150.3
FF:10176-103C5 60 years, female 150.3
Globus pallidus
Scaled Tags Per Million: 51.2
FF:10161-103A8 76 years, female 51.5
FF:10175-103C4 60 years, female 51.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.8
Pig sample Sample description nTPM
Caudate
nTPM: 18.7
Samples: 4

Max nTPM: 21.7
Min nTPM: 15.6
Sample A Female 15.6
Sample B Female 21.7
Sample C Male 18.2
Sample D Male 19.3
Putamen
nTPM: 19.9
Samples: 4

Max nTPM: 26.5
Min nTPM: 16.1
Sample A Female 26.5
Sample B Female 16.1
Sample C Male 16.1
Sample D Male 20.7
Septum
nTPM: 19.8
Samples: 4

Max nTPM: 27.0
Min nTPM: 13.1
Sample A Female 27.0
Sample B Female 22.1
Sample C Male 17.1
Sample D Male 13.1
Ventral pallidum
nTPM: 19.6
Samples: 4

Max nTPM: 23.6
Min nTPM: 14.4
Sample A Female 23.6
Sample B Female 14.4
Sample C Male 17.2
Sample D Male 23.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 105.7
Samples: 4

Max nTPM: 106.8
Min nTPM: 104.2
Sample A Male 104.2
Sample B Male 105.7
Sample C Female 106.1
Sample D Female 106.8
Septum
nTPM: 58.8
Samples: 4

Max nTPM: 71.0
Min nTPM: 49.3
Sample A Male 50.8
Sample B Male 49.3
Sample C Female 64.2
Sample D Female 71.0
Ventral forebrain
nTPM: 68.3
Samples: 4

Max nTPM: 74.9
Min nTPM: 63.2
Sample A Male 63.2
Sample B Male 65.2
Sample C Female 74.9
Sample D Female 70.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.8
68301927 Antisense, RP_041130_02_A12, Mouse strain C57BL/6J (56 days, male) 2.4
73512493 Antisense, RP_051017_02_D04, Mouse strain C57BL/6J (56 days, male) 1.2
Pallidum
Expression energy: 1.2
68301927 Antisense, RP_041130_02_A12, Mouse strain C57BL/6J (56 days, male) 1.9
73512493 Antisense, RP_051017_02_D04, Mouse strain C57BL/6J (56 days, male) 0.5

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