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TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Medium
Hepatocytes: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:183.5 nTPM
HPA:108.4 nTPM
GTEx:183.5 nTPM
FANTOM5:172.0 Scaled Tags Per Million

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051911
Cholangiocytes Medium
Hepatocytes Medium


LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.4
N/A
Female, age 60
Liver sample 21
nTPM: 134.3
overview
Male, age 54
Liver sample 23
nTPM: 108.9
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 143
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 50.6
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 74.3
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 87.1
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 89.7
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 151
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 110.5
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 134.8
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

183.5
GTEx sample id Sample description nTPM
Liver
Average nTPM: 183.5
Samples: 226

Max nTPM: 341.1
Min nTPM: 54.8
Std nTPM: 52.6
Median nTPM: 179.6
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 341.1
GTEX-14PHX-0526-SM-664NW 50-59 years, male 329.1
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 325.6
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 318.8
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 317.2
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 312.1
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 302.8
GTEX-14E7W-1526-SM-6871X 70-79 years, male 281.8
GTEX-P78B-1326-SM-3P611 40-49 years, female 281.8
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 279.7
GTEX-14JG1-1626-SM-664NH 40-49 years, male 277.6
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 274.9
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 273.4
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 272.7
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 272.5
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 270.3
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 264.7
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 262.7
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 256.9
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 256.4
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 252.7
GTEX-QESD-2026-SM-447BI 20-29 years, male 251.3
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 250.9
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 250.6
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 245.1
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 244.9
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 244.4
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 242.6
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 242.2
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 241.7
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 241.0
GTEX-18A7A-1526-SM-72D69 50-59 years, female 239.4
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 238.4
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 237.4
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 237.4
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 237.3
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 235.3
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 235.2
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 234.0
GTEX-18A66-2026-SM-7189C 60-69 years, male 232.8
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 231.6
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 231.1
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 230.9
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 230.2
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 228.9
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 226.3
GTEX-REY6-1226-SM-48FDR 60-69 years, male 225.3
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 224.8
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 224.4
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 223.0
GTEX-S33H-1626-SM-4AD68 30-39 years, male 222.5
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 221.0
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 220.0
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 218.4
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 217.5
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 216.0
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 215.5
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 214.5
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 214.3
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 214.2
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 213.1
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 213.0
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 211.3
GTEX-YECK-1926-SM-4W21H 60-69 years, male 210.3
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 210.2
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 209.7
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 209.5
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 208.4
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 207.8
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 206.9
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 206.2
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 206.0
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 205.9
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 205.9
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 205.4
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 205.3
GTEX-17HHE-0126-SM-79398 50-59 years, male 205.2
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 202.7
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 202.2
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 201.8
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 200.9
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 199.7
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 198.5
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 198.1
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 197.9
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 197.7
GTEX-11ZUS-2526-SM-59872 30-39 years, male 196.9
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 196.0
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 195.9
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 195.8
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 194.4
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 194.3
GTEX-13112-1426-SM-5EGH8 50-59 years, male 193.0
GTEX-R53T-0326-SM-48FEC 50-59 years, female 192.8
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 192.8
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 191.7
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 189.2
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 187.3
GTEX-Q734-0326-SM-48U15 40-49 years, female 187.2
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 186.9
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 186.7
GTEX-1399T-0826-SM-5IFES 60-69 years, male 186.1
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 186.1
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 185.6
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 185.3
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 184.0
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 183.3
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 183.2
GTEX-13113-1326-SM-5GCOI 60-69 years, female 183.1
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 181.8
GTEX-18465-1626-SM-7LG6N 50-59 years, male 181.0
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 180.9
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 180.1
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 179.0
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 178.8
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 178.8
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 177.8
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 177.5
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 175.6
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 175.1
GTEX-1B932-1426-SM-793AN 40-49 years, female 174.5
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 173.5
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 173.3
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 172.8
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 172.5
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 172.2
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 172.0
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 171.7
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 171.1
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 169.6
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 169.2
GTEX-144GL-1426-SM-79OMA 50-59 years, male 168.8
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 168.4
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 168.3
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 166.7
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 166.6
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 163.2
GTEX-RU72-1426-SM-46MUF 50-59 years, female 162.7
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 162.1
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 161.8
GTEX-11GSP-0626-SM-5986T 60-69 years, female 161.7
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 161.7
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 161.0
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 161.0
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 160.6
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 159.9
GTEX-RN64-1826-SM-48FDV 50-59 years, male 157.6
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 157.1
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 157.0
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 156.5
GTEX-X261-1726-SM-4PQYT 50-59 years, male 155.4
GTEX-12696-0826-SM-5EGGE 60-69 years, male 155.0
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 155.0
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 154.9
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 154.5
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 154.1
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 154.0
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 153.6
GTEX-17F96-1226-SM-79OK2 70-79 years, male 153.6
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 152.7
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 152.5
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 152.5
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 151.9
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 151.8
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 151.3
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 151.2
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 150.5
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 149.8
GTEX-O5YV-0726-SM-EV798 60-69 years, female 147.1
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 145.8
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 145.3
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 144.5
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 143.5
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 142.5
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 142.4
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 142.2
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 140.9
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 140.8
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 140.3
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 139.8
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 139.6
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 138.6
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 138.0
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 138.0
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 137.5
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 135.6
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 135.0
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 134.6
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 134.4
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 134.2
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 134.2
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 134.1
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 132.3
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 132.2
GTEX-QEL4-1226-SM-447A4 50-59 years, male 131.6
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 131.0
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 129.6
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 127.0
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 124.1
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 122.5
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 121.4
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 119.3
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 118.0
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 116.9
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 116.1
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 116.0
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 115.7
GTEX-1B933-1226-SM-731DW 50-59 years, female 114.6
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 113.9
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 112.5
GTEX-14PJO-1726-SM-68719 60-69 years, male 112.0
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 110.4
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 108.4
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 107.6
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 106.4
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 105.4
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 103.4
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 100.6
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 95.6
GTEX-14XAO-0226-SM-68728 60-69 years, female 94.4
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 87.1
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 84.5
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 80.3
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 73.0
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 64.5
GTEX-S32W-1926-SM-4AD63 50-59 years, female 54.8
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

172.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 172.0
FF:10018-101C9 64,69,70 years, mixed 172.0

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