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UCHL1
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  • UCHL1
TISSUE PRIMARY DATA HIPPOCAMPUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Hippocampus
Tissue proteome
HIPPOCAMPUS - Expression summary
Protein expression
Hippocampusi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Mouse brain, Intensity
Hippocampal formationi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

90.180
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:491.2 nTPM
GTEx:414.8 nTPM
FANTOM5:845.6 Scaled Tags Per Million

HIPPOCAMPUS - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA005993Antibody CAB002580
Glial cells MediumNot detected
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody CAB079024
Hippocampal formation mean intensity 90.180
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Polymorph layer of the dentate gyrus 64.863
Molecular layer of the dentate gyrus 55.265
Granular dentate gyrus 35.970
CA1 - oriens layer 49.595
CA1 - pyramidal layer 46.593
CA1 - radiatum layer 55.256
CA2 - oriens layer 71.373
CA2 - pyramidal layer 69.925
CA2 - radiatum layer 75.225
CA3 - oriens layer 90.180
CA3 - pyramidal layer 80.830
CA3 - radiatum layer 78.164
Stratum lucidum 69.347
Lacunosum moleculare 41.510
Subiculum 58.788

HIPPOCAMPUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

491.2
Sample id Sample description nTPM
Hippocampus
nTPM: 491.2
1898 Male, age 80, left hemisphere 749.7
2621 Female, age 67, right hemisphere 683.6
2148 Female, age 91, left hemisphere 473.2
1855 Male, age 76, left hemisphere 413.1
1911 Female, age 85, right hemisphere 394.9
2529 Female, age 94, left hemisphere 232.8

HIPPOCAMPUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

414.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 414.8
Samples: 197

Max nTPM: 1722.6
Min nTPM: 41.0
Std nTPM: 336.5
Median nTPM: 321.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 1722.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 1358.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 1325.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 1324.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 1288.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 1248.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 1237.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 1153.5
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 1151.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 1149.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 1135.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 1087.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1051.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 1036.7
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 979.9
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 969.2
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 951.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 911.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 910.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 908.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 902.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 895.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 894.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 876.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 869.0
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 853.7
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 840.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 813.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 788.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 751.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 750.9
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 746.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 745.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 734.7
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 734.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 731.2
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 726.2
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 722.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 700.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 693.3
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 692.7
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 691.0
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 687.6
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 660.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 648.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 638.9
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 630.4
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 624.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 618.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 617.1
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 604.9
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 579.1
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 565.9
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 563.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 561.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 560.4
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 557.5
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 546.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 540.4
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 513.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 512.3
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 504.0
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 501.2
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 496.8
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 494.3
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 475.6
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 466.9
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 465.1
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 458.5
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 446.3
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 438.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 433.6
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 430.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 428.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 426.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 415.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 415.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 405.1
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 399.8
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 384.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 375.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 375.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 372.5
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 372.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 370.2
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 369.2
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 363.9
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 362.1
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 361.9
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 347.4
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 345.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 343.7
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 339.2
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 337.4
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 331.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 329.3
GTEX-15DCD-0011-R1b-SM-6LPIJ 70-79 years, female 328.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 322.5
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 321.8
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 316.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 314.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 313.6
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 300.6
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 289.6
GTEX-14PJM-0011-R1a-SM-CNPO3 50-59 years, female 278.9
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 277.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 277.1
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 276.8
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 263.9
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 262.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 259.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 259.1
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 256.0
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 252.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 249.5
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 249.2
GTEX-1C6VR-0011-R1a-SM-7MXUE 60-69 years, male 246.4
GTEX-15CHQ-0011-R1a-SM-COH27 60-69 years, male 235.8
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 234.8
GTEX-1EKGG-0011-R1b-SM-9QEI1 60-69 years, male 231.8
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 223.4
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 218.3
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 214.2
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 213.6
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 201.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 201.0
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 199.6
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 195.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 185.4
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 183.8
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 174.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 167.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 167.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 165.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 163.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 156.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 152.6
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 152.3
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 150.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 150.4
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 149.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 148.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 145.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 143.4
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 142.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 138.9
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 138.5
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 136.5
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 136.3
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 135.2
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 132.5
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 128.2
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 126.8
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 126.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 125.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 125.3
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 124.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 118.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 118.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 116.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 116.6
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 116.4
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 114.9
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 114.2
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 113.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 112.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 110.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 108.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 105.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 103.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 101.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 98.8
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 98.1
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 96.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 93.1
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 92.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 91.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 90.2
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 90.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 87.0
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 85.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 85.3
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 85.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 84.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 83.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 82.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 82.5
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 82.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 78.0
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 77.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 73.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 73.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 72.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 66.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 65.7
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 58.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 41.0
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HIPPOCAMPUS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

845.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 845.6
FF:10169-103B7 60 years, female 1329.3
FF:10153-102I9 76 years, female 361.9

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