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UCHL1
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  • UCHL1
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

123.901
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:778.3 nTPM
HPA Brain:1773.9 nTPM
GTEx:778.3 nTPM
Pig:678.2 nTPM
Mouse:424.7 nTPM
Allen mouse:24.5 Expression energy

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody CAB079024
Hypothalamus mean intensity 123.901
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Dorsal tuberomammillary nucleus 105.199
Mammillary nucleus 60.818
Periventricular hypothalamic nucleus 118.857
Supraoptic nucleus 122.724
Tuberal nucleus 67.103
Ventral tuberomammillary nucleus -
Lateral preoptic area 55.331
Medial preoptic area 74.825
Suprachiasmatic nucleus 123.901
Paraventricular hypothalamic nucleus 84.249
Anterior hypothalamic area, central 71.000
Ventral medial hypothalamic nucleus 60.679
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 54.753
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 67.711
Dorsal medial hypothalamic nucleus 81.963
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1773.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 1165.1
2226 Male, age 75, left hemisphere 1894.3
1961 Female, age 42, unknown 435.8
Dorsomedial nucleus
nTPM: 439.0
1989 Male, age 62, unknown 577.2
2041 Female, age 72, unknown 435.9
2017 Female, age 42, unknown 304.0
Lateral hypothalamic area
nTPM: 1773.9
2271 Male, age 75, both hemispheres 3734.7
2228 Male, age 66, unknown 1507.7
1791 Male, age 80, right hemisphere 1267.0
2412 Male, age 62, unknown 586.4
Mammillary body
nTPM: 516.9
1923 Female, age 72, unknown 791.9
2413 Male, age 66, unknown 693.6
1945 Male, age 80, right hemisphere 428.8
1948 Female, age 72, unknown 390.6
1834 Female, age 42, unknown 279.9
Paraventricular nucleus
nTPM: 367.6
2700 Male, age 62, unknown 367.6
Preoptic area
nTPM: 526.3
1907 Male, age 80, right hemisphere 681.3
2414 Female, age 72, unknown 541.1
1861 Female, age 42, unknown 356.5
Supraoptic nucleus
nTPM: 456.5
2835 Female, age 72, unknown 579.1
1894 Female, age 72, unknown 433.7
2043 Male, age 62, unknown 356.7
Ventromedial nucleus
nTPM: 434.7
1982 Female, age 72, unknown 456.0
1822 Female, age 42, unknown 413.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

778.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 778.3
Samples: 202

Max nTPM: 3204.4
Min nTPM: 41.7
Std nTPM: 533.5
Median nTPM: 659.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 3204.4
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 3091.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 2793.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 2229.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 2178.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 2011.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 1941.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 1878.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 1789.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 1731.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 1715.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 1690.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 1665.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 1664.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 1593.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 1571.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 1569.5
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 1508.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 1396.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 1382.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 1372.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 1356.5
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 1346.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 1302.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 1300.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 1298.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 1294.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 1284.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 1279.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 1236.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 1207.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 1189.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 1189.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 1166.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 1158.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 1152.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 1149.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 1146.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 1126.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 1114.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 1114.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 1112.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 1105.7
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 1100.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 1098.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 1095.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 1094.6
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 1089.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 1080.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 1065.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 1065.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 1052.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 1049.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 1047.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 1031.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 1030.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 1024.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 1014.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 994.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 990.0
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 986.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 977.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 971.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 952.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 931.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 931.7
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 929.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 924.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 924.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 923.1
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 922.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 915.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 913.0
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 903.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 898.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 895.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 884.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 854.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 851.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 850.9
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 846.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 841.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 840.2
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 837.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 828.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 808.9
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 807.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 795.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 768.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 767.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 753.4
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 727.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 724.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 722.3
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 719.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 688.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 687.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 687.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 685.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 675.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 661.3
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 657.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 656.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 654.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 650.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 648.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 647.2
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 639.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 628.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 625.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 621.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 615.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 615.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 606.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 606.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 591.1
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 586.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 584.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 582.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 579.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 561.9
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 551.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 549.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 545.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 542.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 539.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 537.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 534.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 526.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 522.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 518.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 513.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 513.0
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 498.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 492.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 488.0
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 486.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 477.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 471.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 466.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 465.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 458.5
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 450.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 444.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 439.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 436.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 435.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 418.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 416.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 404.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 402.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 399.9
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 394.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 390.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 382.4
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 380.5
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 369.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 365.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 356.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 348.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 345.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 338.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 326.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 315.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 311.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 300.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 286.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 283.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 280.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 259.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 250.0
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 246.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 245.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 241.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 240.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 238.4
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 212.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 212.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 182.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 179.9
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 178.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 175.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 173.8
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 168.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 157.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 153.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 153.8
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 151.5
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 150.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 149.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 147.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 138.0
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 121.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 117.7
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 108.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 105.9
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 103.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 102.6
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 99.4
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 90.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 76.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 41.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

678.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 678.2
Samples: 4

Max nTPM: 880.1
Min nTPM: 583.1
Sample A Female 880.1
Sample B Female 645.8
Sample C Male 583.1
Sample D Male 603.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

424.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 424.7
Samples: 4

Max nTPM: 574.1
Min nTPM: 289.1
Sample A Male 535.5
Sample B Male 574.1
Sample C Female 299.9
Sample D Female 289.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

24.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 24.5
79556674 Antisense, RP_071204_01_C07, Mouse strain C57BL/6J (56 days, male) 28.8
79632309 Antisense, RP_071204_01_C07, Mouse strain C57BL/6J (56 days, male) 22.4
1089 Antisense, RP_Baylor_253988, Mouse strain C57BL/6J (56 days, male) 20.1
1088 Antisense, RP_Baylor_253988, Mouse strain C57BL/6J (56 days, male) 17.4

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