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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Low
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Low
Molecular layer cells - cytoplasm/membrane: Medium
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Medium
Purkinje cells - dendrites: Medium
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:122.0 nTPM
HPA Brain:99.0 nTPM
GTEx:122.0 nTPM
FANTOM5:143.8 Scaled Tags Per Million
Pig:124.7 nTPM
Mouse:60.8 nTPM
Allen mouse:18.6 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA054825
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane Medium
Purkinje cells - dendrites Medium
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Low
Granular cells - nucleus Not detected
Molecular layer - neuropil Low
Molecular layer cells - cytoplasm/membrane Medium
Molecular layer cells - nucleus Not detected
Processes in granular layer Not detected
Processes in molecular layer Not detected
Processes in white matter Not detected
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core Not detected
White matter cells - cytoplasm/membrane Not detected
White matter cells - nucleus Not detected


CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

99.0
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 99.0
2101 Male, age 74, right hemisphere 182.5
1768 Female, age 72, unknown 105.9
1774 Male, age 80, left hemisphere 105.5
2055 Female, age 91, right hemisphere 99.8
2006 Male, age 61, right hemisphere 95.7
1769 Male, age 76, right hemisphere 85.1
1788 Male, age 55, unknown 69.2
2003 Female, age 85, right hemisphere 48.3
Cerebellar nuclei
nTPM: 15.7
2318 Male, age 74, left hemisphere 61.6
2005 Male, age 80, left hemisphere 12.8
1966 Female, age 91, left hemisphere 12.7
2783 Female, age 72, unknown 12.4
2175 Male, age 61, right hemisphere 10.8
1879 Male, age 55, unknown 8.6
1871 Male, age 74, unknown 8.1
2177 Female, age 85, both hemispheres 7.5
2882 Male, age 76, left hemisphere 7.4
Flocculonodular lobe
nTPM: 83.5
1771 Male, age 80, left hemisphere 116.0
2176 Female, age 91, right hemisphere 103.1
1767 Male, age 76, left hemisphere 81.8
2004 Male, age 61, right hemisphere 74.3
1792 Male, age 74, unknown 74.1
1835 Female, age 85, right hemisphere 71.7
1765 Male, age 55, unknown 63.3
Vermis
nTPM: 86.4
1751 Male, age 74, right hemisphere 171.3
1928 Female, age 72, unknown 111.6
1988 Female, age 85, left hemisphere 85.9
1778 Female, age 91, left hemisphere 84.9
1770 Male, age 76, left hemisphere 78.7
1825 Male, age 74, unknown 73.0
2834 Male, age 80, left hemisphere 69.3
1766 Male, age 55, unknown 51.4
2460 Male, age 61, both hemispheres 51.0

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

122.0
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 122.0
Samples: 215

Max nTPM: 176.4
Min nTPM: 28.7
Std nTPM: 20.3
Median nTPM: 123.4
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 176.4
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 176.1
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 175.8
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 168.0
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 161.1
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 157.4
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 156.9
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 155.9
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 153.0
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 152.0
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 150.8
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 150.7
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 150.6
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 149.9
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 149.3
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 148.8
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 148.6
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 148.0
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 146.8
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 146.6
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 146.4
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 145.5
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 144.5
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 143.6
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 143.2
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 142.5
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 142.4
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 142.4
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 142.0
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 141.4
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 141.2
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 140.5
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 140.3
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 140.2
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 139.6
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 139.5
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 139.3
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 139.2
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 138.0
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 137.6
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 137.1
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 137.0
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 136.8
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 136.8
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 136.6
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 136.4
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 136.3
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 135.8
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 135.7
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 135.6
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 135.3
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 135.1
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 134.5
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 134.4
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 134.4
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 134.3
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 133.9
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 133.8
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 133.6
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 133.5
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 133.3
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 133.3
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 132.5
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 132.4
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 132.1
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 132.0
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 131.9
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 131.8
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 131.4
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 131.1
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 131.1
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 130.8
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 130.6
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 130.4
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 130.2
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 129.5
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 129.2
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 129.2
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 129.0
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 128.9
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 128.8
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 127.8
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 127.8
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 127.7
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 127.5
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 127.5
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 127.4
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 127.4
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 126.9
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 126.6
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 126.5
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 125.8
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 125.7
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 125.6
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 125.0
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 125.0
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 124.9
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 124.8
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 124.7
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 124.7
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 124.6
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 124.6
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 124.5
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 124.4
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 124.2
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 123.7
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 123.5
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 123.4
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 122.9
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 122.6
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 122.5
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 122.4
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 122.4
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 122.2
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 121.8
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 121.7
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 121.6
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 121.5
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 121.3
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 121.1
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 120.8
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 120.6
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 120.2
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 120.0
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 119.9
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 119.6
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 119.1
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 119.1
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 119.0
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 118.9
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 118.1
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 118.1
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 117.6
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 117.6
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 116.5
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 116.3
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 116.3
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 115.9
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 115.8
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 115.6
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 115.5
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 115.3
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 115.0
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 114.6
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 114.4
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 114.1
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 114.0
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 113.9
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 113.6
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 113.5
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 113.4
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 113.4
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 113.3
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 113.1
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 113.0
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 112.9
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 112.4
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 112.2
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 112.0
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 111.5
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 111.5
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 111.3
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 110.4
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 109.9
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 109.8
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 109.6
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 109.2
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 108.6
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 107.5
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 107.5
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 107.3
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 106.9
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 106.4
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 106.1
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 105.1
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 105.0
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 104.9
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 104.8
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 104.8
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 104.6
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 103.2
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 103.2
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 103.2
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 102.9
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 102.5
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 102.4
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 102.0
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 101.8
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 101.7
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 101.1
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 101.0
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 100.7
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 100.6
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 100.6
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 100.2
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 100.2
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 99.8
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 98.6
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 98.3
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 96.7
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 95.6
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 92.2
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 90.6
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 88.9
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 88.6
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 88.3
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 88.3
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 80.3
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 79.2
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 74.7
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 73.2
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 67.8
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 59.5
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 56.6
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 28.7
Show allShow less
Brain - Cerebellum
Average nTPM: 95.5
Samples: 241

Max nTPM: 145.3
Min nTPM: 45.0
Std nTPM: 15.8
Median nTPM: 95.2
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 145.3
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 143.6
GTEX-1192X-3226-SM-5987D 50-59 years, male 136.5
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 126.3
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 125.8
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 124.6
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 123.4
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 123.1
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 123.0
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 123.0
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 122.8
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 121.1
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 120.4
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 119.4
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 119.3
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 117.8
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 117.7
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 117.7
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 117.6
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 117.0
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 116.5
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 116.5
GTEX-X261-3126-SM-4PQZC 50-59 years, male 116.1
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 116.0
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 115.6
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 115.2
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 115.1
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 114.9
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 114.7
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 113.9
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 113.6
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 113.5
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 113.5
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 113.4
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 113.1
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 112.7
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 112.7
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 112.5
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 112.2
GTEX-14ABY-3026-SM-664NE 50-59 years, male 112.2
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 112.0
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 111.9
GTEX-WL46-2826-SM-3LK81 50-59 years, male 111.5
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 111.5
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 110.9
GTEX-11NUK-3026-SM-5986K 50-59 years, male 110.6
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 110.4
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 110.1
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 109.2
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 108.7
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 108.7
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 108.6
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 108.1
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 107.7
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 107.4
GTEX-145LS-3026-SM-5O99S 60-69 years, female 107.0
GTEX-1B933-3026-SM-731DB 50-59 years, female 106.5
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 106.5
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 106.4
GTEX-17EVP-2926-SM-793BU 40-49 years, male 106.2
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 105.9
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 105.6
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 105.5
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 105.5
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 105.1
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 105.0
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 104.9
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 104.9
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 104.5
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 104.3
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 104.3
GTEX-14E6D-2926-SM-664OP 50-59 years, male 104.0
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 104.0
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 103.8
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 103.7
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 103.6
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 103.5
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 103.5
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 103.5
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 103.3
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 103.0
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 102.8
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 102.6
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 102.4
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 102.3
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 102.2
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 101.5
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 101.1
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 100.7
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 100.7
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 100.6
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 99.6
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 99.6
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 99.5
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 99.4
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 99.2
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 98.5
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 98.5
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 98.5
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 98.1
GTEX-11EI6-2926-SM-5985U 60-69 years, male 98.0
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 98.0
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 97.6
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 97.5
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 97.5
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 97.4
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 97.3
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 97.0
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 96.9
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 96.8
GTEX-14PN4-3026-SM-664O4 50-59 years, male 96.7
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 96.6
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 96.6
GTEX-12126-0926-SM-5FQTW 20-29 years, male 95.9
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 95.9
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 95.7
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 95.6
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 95.5
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 95.4
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 95.3
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 95.2
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 95.1
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 95.0
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 94.4
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 94.2
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 93.9
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 93.8
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 93.7
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 93.7
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 93.5
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 93.1
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 93.1
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 92.9
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 92.4
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 92.3
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 92.1
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 92.1
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 91.8
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 91.8
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 91.5
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 91.4
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 91.4
GTEX-13112-2926-SM-5DUWT 50-59 years, male 91.3
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 91.2
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 90.9
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 90.8
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 90.7
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 90.3
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 90.2
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 90.0
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 89.5
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 89.5
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 89.4
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 89.4
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 89.3
GTEX-15G19-2826-SM-6M48K 60-69 years, male 88.5
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 88.4
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 88.2
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 88.1
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 88.1
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 88.1
GTEX-18465-2926-SM-7KFSE 50-59 years, male 87.9
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 87.9
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 87.7
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 87.6
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 86.7
GTEX-144GL-2926-SM-5O99F 50-59 years, male 86.6
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 86.6
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 86.4
GTEX-11DYG-2926-SM-5H132 60-69 years, male 86.1
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 86.1
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 86.1
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 86.0
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 85.8
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 85.7
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 85.6
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 85.4
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 85.3
GTEX-11ONC-3026-SM-5985W 60-69 years, male 85.2
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 85.0
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 84.7
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 84.5
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 84.4
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 84.4
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 84.4
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 84.3
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 84.2
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 84.2
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 84.1
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 84.1
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 83.9
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 83.9
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 83.3
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 83.3
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 83.2
GTEX-RU72-2926-SM-2TF66 50-59 years, female 83.2
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 83.2
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 83.1
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 82.9
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 82.7
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 82.5
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 82.3
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 82.3
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 81.8
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 81.7
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 81.3
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 81.1
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 80.1
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 79.5
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 79.3
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 79.1
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 78.7
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 78.3
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 78.1
GTEX-17HII-2926-SM-79OMK 50-59 years, male 77.9
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 77.2
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 76.9
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 76.0
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 75.2
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 75.1
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 75.1
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 74.7
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 74.6
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 74.6
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 73.9
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 73.4
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 71.9
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 71.8
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 71.3
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 70.8
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 68.8
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 68.4
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 68.3
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 68.3
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 67.2
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 62.5
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 59.6
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 56.1
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 49.7
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 49.2
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 45.0
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

143.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 143.8
FF:10166-103B4 76 years, female 184.7
FF:10083-102B2 22-68 years, mixed 102.8

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

124.7
Pig sample Sample description nTPM
Cerebellum
nTPM: 124.7
Samples: 4

Max nTPM: 139.4
Min nTPM: 116.3
Sample A Female 139.4
Sample B Female 118.5
Sample C Male 116.3
Sample D Male 124.4

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.8
Mouse sample Sample description nTPM
Cerebellum
nTPM: 60.8
Samples: 4

Max nTPM: 65.8
Min nTPM: 53.8
Sample A Male 65.8
Sample B Male 53.8
Sample C Female 63.9
Sample D Female 59.6

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

18.6
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 18.6
71587832 Antisense, RP_050725_01_G06, Mouse strain C57BL/6J (56 days, male) 24.4
634453 Antisense, RP_040914_01_A03, Mouse strain C57BL/6J (56 days, male) 12.7

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