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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:61.4 nTPM
HPA Brain:35.7 nTPM
GTEx:61.4 nTPM
FANTOM5:83.3 Scaled Tags Per Million
Pig:32.7 nTPM
Mouse:43.6 nTPM
Allen mouse:3.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA056179Antibody HPA061345
Glial cells LowHigh
Neuronal cells MediumMedium




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 32.7
2481 Female, age 94, left hemisphere 47.2
1857 Female, age 85, left hemisphere 41.2
1854 Male, age 80, left hemisphere 36.1
2290 Female, age 72, unknown 30.3
2846 Female, age 79, unknown 28.8
2288 Male, age 75, left hemisphere 28.4
2289 Male, age 61, right hemisphere 25.6
1781 Male, age 74, unknown 23.9
Globus pallidus, externus
nTPM: 35.7
1996 Male, age 80, right hemisphere 46.0
2395 Male, age 75, both hemispheres 39.1
2772 Female, age 79, unknown 36.1
2646 Male, age 61, right hemisphere 30.1
2567 Female, age 72, unknown 27.2
Globus pallidus, internus
nTPM: 33.8
2483 Female, age 94, right hemisphere 40.3
2037 Male, age 80, right hemisphere 40.1
1818 Male, age 74, unknown 35.0
2287 Male, age 75, right hemisphere 33.9
2778 Female, age 91, both hemispheres 33.3
2566 Female, age 72, unknown 27.6
2111 Female, age 85, right hemisphere 26.6
Nucleus accumbens
nTPM: 31.2
2698 Female, age 72, unknown 34.4
2391 Female, age 94, left hemisphere 33.8
1806 Female, age 85, left hemisphere 32.9
1856 Female, age 91, right hemisphere 32.7
2286 Male, age 75, left hemisphere 32.5
1783 Male, age 74, unknown 29.0
2824 Male, age 61, right hemisphere 28.5
2732 Male, age 80, right hemisphere 26.0
Nucleus basalis of Meynert
nTPM: 29.4
2569 Male, age 61, both hemispheres 32.5
2393 Male, age 80, right hemisphere 31.4
2484 Female, age 94, left hemisphere 28.6
2821 Male, age 75, both hemispheres 25.0
Nucleus of the diagonal band
nTPM: 26.7
1812 Female, age 91, both hemispheres 33.3
1979 Male, age 74, unknown 28.8
2195 Female, age 85, both hemispheres 26.1
2775 Male, age 80, right hemisphere 25.6
2029 Male, age 61, right hemisphere 19.8
Putamen
nTPM: 30.8
2482 Female, age 94, left hemisphere 42.2
1829 Male, age 74, unknown 32.1
1838 Male, age 80, right hemisphere 31.1
1937 Female, age 91, right hemisphere 29.6
2647 Male, age 75, left hemisphere 28.6
2466 Female, age 79, unknown 25.9
2489 Female, age 72, unknown 25.8
Septal nuclei
nTPM: 28.7
2199 Male, age 80, right hemisphere 31.7
2394 Male, age 61, left hemisphere 30.9
2059 Female, age 85, both hemispheres 30.6
2009 Female, age 91, both hemispheres 28.7
2031 Female, age 72, unknown 28.4
2629 Female, age 94, right hemisphere 26.3
1960 Male, age 74, unknown 24.1
Stria terminalis, bed nucleus
nTPM: 22.2
2201 Male, age 74, unknown 24.8
1974 Female, age 91, both hemispheres 22.3
2486 Female, age 94, both hemispheres 19.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 57.1
Samples: 246

Max nTPM: 138.4
Min nTPM: 26.4
Std nTPM: 16.2
Median nTPM: 53.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 138.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 135.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 112.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 97.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 91.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 90.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 89.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 87.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 87.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 86.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 86.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 85.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 83.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 83.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 83.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 82.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 82.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 82.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 81.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 81.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 80.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 80.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 80.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 79.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 79.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 79.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 79.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 77.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 76.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 76.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 76.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 75.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 75.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 74.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 74.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 74.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 74.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 73.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 72.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 72.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 72.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 72.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 71.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 71.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 71.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 70.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 69.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 69.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 69.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 69.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 69.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 68.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 68.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 68.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 67.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 67.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 67.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 67.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 67.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 67.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 66.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 66.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 66.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 65.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 65.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 65.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 65.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 63.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 63.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 63.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 63.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 63.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 63.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 63.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 63.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 63.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 62.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 62.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 62.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 62.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 62.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 62.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 61.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 61.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 60.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 60.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 60.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 60.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 60.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 59.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 59.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 59.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 59.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 58.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 58.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 58.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 58.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 58.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 57.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 57.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 57.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 57.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 56.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 56.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 56.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 55.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 55.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 55.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 55.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 55.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 55.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 55.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 55.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 54.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 54.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 54.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 54.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 54.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 54.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 53.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 53.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 53.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 53.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 53.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 53.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 52.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 52.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 52.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 52.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 52.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 52.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 52.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 52.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 51.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 51.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 51.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 51.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 51.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 51.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 51.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 50.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 50.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 50.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 50.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 50.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 50.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 50.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 50.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 50.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 50.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 50.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 49.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 49.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 49.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 49.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 49.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 49.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 49.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 49.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 49.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 49.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 49.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 48.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 48.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 48.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 48.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 48.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 48.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 48.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 47.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 47.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 47.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 47.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 47.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 47.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 47.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 46.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 46.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 46.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 46.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 46.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 46.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 46.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 45.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 45.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 45.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 45.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 45.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 45.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 45.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 45.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 44.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 44.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 44.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 44.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 44.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 44.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 43.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 43.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 43.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 43.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 43.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 43.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 43.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 42.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 42.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 42.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 42.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 42.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 42.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 42.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 42.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 42.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 42.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 42.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 41.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 41.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 41.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 41.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 40.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 40.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 40.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 39.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 39.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 38.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 38.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 38.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 38.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 38.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 38.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 37.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 36.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 36.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 36.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 36.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 36.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 35.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 35.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 34.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 33.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 32.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 32.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 31.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 31.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 26.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 26.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 56.6
Samples: 246

Max nTPM: 146.6
Min nTPM: 21.3
Std nTPM: 16.5
Median nTPM: 54.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 146.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 109.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 106.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 104.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 97.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 94.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 94.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 92.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 91.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 91.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 90.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 90.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 89.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 82.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 82.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 81.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 80.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 79.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 78.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 78.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 78.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 78.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 78.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 77.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 77.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 76.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 76.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 76.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 76.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 75.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 75.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 75.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 75.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 75.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 75.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 75.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 75.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 74.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 74.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 74.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 74.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 72.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 72.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 72.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 72.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 70.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 70.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 69.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 69.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 68.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 68.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 68.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 67.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 67.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 67.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 66.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 66.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 66.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 65.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 65.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 65.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 65.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 64.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 64.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 64.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 63.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 63.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 63.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 63.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 63.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 62.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 62.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 62.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 62.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 61.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 61.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 61.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 61.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 60.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 60.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 60.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 60.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 60.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 59.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 59.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 59.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 59.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 59.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 59.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 58.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 58.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 58.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 58.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 58.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 58.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 58.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 58.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 57.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 57.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 57.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 57.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 57.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 57.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 57.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 56.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 56.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 56.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 55.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 55.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 55.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 55.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 55.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 55.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 55.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 55.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 55.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 54.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 54.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 54.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 54.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 54.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 54.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 54.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 54.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 54.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 53.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 53.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 53.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 53.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 53.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 53.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 52.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 52.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 52.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 52.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 52.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 51.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 51.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 51.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 51.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 51.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 51.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 51.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 51.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 51.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 50.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 50.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 50.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 50.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 50.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 50.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 50.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 50.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 49.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 49.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 49.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 49.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 49.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 49.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 49.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 49.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 48.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 48.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 48.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 48.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 48.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 48.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 47.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 47.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 47.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 47.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 47.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 46.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 46.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 46.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 46.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 46.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 46.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 46.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 46.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 46.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 45.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 45.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 45.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 45.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 45.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 44.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 44.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 44.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 44.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 44.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 44.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 43.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 43.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 43.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 43.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 43.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 43.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 43.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 43.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 43.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 43.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 43.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 42.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 42.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 42.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 42.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 42.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 42.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 42.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 41.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 41.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 41.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 40.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 40.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 40.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 40.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 40.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 40.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 40.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 38.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 38.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 38.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 38.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 37.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 37.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 37.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 36.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 36.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 36.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 36.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 35.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 35.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 34.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 33.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 33.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 32.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 31.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 31.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 31.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 30.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 28.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 28.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 27.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 25.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 21.3
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Brain - Putamen (basal ganglia)
Average nTPM: 61.4
Samples: 205

Max nTPM: 138.1
Min nTPM: 32.1
Std nTPM: 16.3
Median nTPM: 58.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 138.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 125.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 113.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 108.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 105.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 95.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 95.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 95.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 93.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 91.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 90.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 90.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 87.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 87.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 86.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 86.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 85.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 83.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 82.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 81.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 81.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 81.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 81.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 81.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 81.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 80.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 80.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 80.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 79.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 78.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 78.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 77.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 77.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 77.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 75.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 75.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 75.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 75.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 74.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 72.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 72.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 72.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 71.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 71.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 70.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 70.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 70.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 70.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 69.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 69.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 69.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 69.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 69.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 68.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 68.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 68.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 68.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 67.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 66.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 66.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 66.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 66.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 66.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 65.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 65.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 65.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 65.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 64.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 64.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 64.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 64.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 64.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 64.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 64.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 63.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 63.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 63.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 62.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 62.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 62.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 62.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 62.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 61.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 61.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 61.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 61.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 61.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 61.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 60.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 60.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 60.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 60.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 60.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 60.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 60.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 60.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 60.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 59.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 59.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 59.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 58.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 58.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 58.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 58.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 58.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 57.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 57.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 57.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 57.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 57.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 56.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 56.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 56.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 56.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 56.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 55.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 55.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 55.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 55.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 55.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 55.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 55.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 55.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 55.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 55.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 54.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 54.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 54.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 54.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 54.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 54.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 54.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 54.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 54.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 53.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 53.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 53.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 53.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 53.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 53.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 53.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 52.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 52.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 52.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 52.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 51.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 51.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 51.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 50.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 50.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 50.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 50.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 50.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 50.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 50.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 50.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 49.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 49.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 49.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 49.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 49.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 49.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 49.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 48.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 48.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 48.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 48.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 48.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 48.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 47.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 47.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 47.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 47.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 46.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 46.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 46.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 46.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 45.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 45.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 45.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 45.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 44.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 44.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 43.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 43.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 43.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 43.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 43.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 41.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 41.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 41.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 41.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 40.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 40.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 39.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 39.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 39.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 38.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 38.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 36.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 36.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 35.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 34.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 32.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 32.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

83.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 83.3
FF:10164-103B2 76 years, female 83.3
Nucleus accumbens
Scaled Tags Per Million: 51.4
FF:10037-101F1 23-56 years, mixed 51.4
Putamen
Scaled Tags Per Million: 80.5
FF:10176-103C5 60 years, female 80.5
Globus pallidus
Scaled Tags Per Million: 75.0
FF:10161-103A8 76 years, female 82.5
FF:10175-103C4 60 years, female 67.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

32.7
Pig sample Sample description nTPM
Caudate
nTPM: 20.3
Samples: 4

Max nTPM: 22.1
Min nTPM: 17.8
Sample A Female 20.8
Sample B Female 17.8
Sample C Male 22.1
Sample D Male 20.6
Putamen
nTPM: 32.7
Samples: 4

Max nTPM: 43.4
Min nTPM: 23.7
Sample A Female 43.4
Sample B Female 23.7
Sample C Male 32.7
Sample D Male 30.8
Septum
nTPM: 25.9
Samples: 4

Max nTPM: 31.1
Min nTPM: 22.0
Sample A Female 24.8
Sample B Female 22.0
Sample C Male 25.7
Sample D Male 31.1
Ventral pallidum
nTPM: 27.0
Samples: 4

Max nTPM: 31.0
Min nTPM: 20.9
Sample A Female 20.9
Sample B Female 26.7
Sample C Male 29.2
Sample D Male 31.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 43.6
Samples: 4

Max nTPM: 49.0
Min nTPM: 37.8
Sample A Male 37.8
Sample B Male 41.9
Sample C Female 45.8
Sample D Female 49.0
Septum
nTPM: 43.0
Samples: 4

Max nTPM: 47.1
Min nTPM: 38.9
Sample A Male 38.9
Sample B Male 44.8
Sample C Female 41.0
Sample D Female 47.1
Ventral forebrain
nTPM: 41.6
Samples: 4

Max nTPM: 44.0
Min nTPM: 38.3
Sample A Male 38.3
Sample B Male 44.0
Sample C Female 41.5
Sample D Female 42.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.6
69113536 Antisense, RP_050316_02_C09, Mouse strain C57BL/6J (56 days, male) 2.6
Pallidum
Expression energy: 3.0
69113536 Antisense, RP_050316_02_C09, Mouse strain C57BL/6J (56 days, male) 3.0

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