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USP25
HPA
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  • USP25
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

USP25
Synonyms USP21
Gene descriptioni

Full gene name according to HGNC.

Ubiquitin specific peptidase 25
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Metabolic proteins
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 21
Cytoband q21.1
Chromosome location (bp) 15729982 - 15880064
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000155313 (version 109)
Entrez gene 29761
HGNC HGNC:12624
UniProt Q9UHP3 (UniProt - Evidence at protein level)
neXtProt NX_Q9UHP3
GeneCards USP25
Antibodypedia USP25 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Deubiquitinating enzyme that hydrolyzes ubiquitin moieties conjugated to substrates and thus, functions in various biological processes including inflammation, immune response 1, 2. Modulates the Wnt/beta-catenin pathway by deubiquitinating and stabilizing tankyrases TNKS1 and TNKS2 3, 4. Regulates KEAP1-NRF2 axis in the defense against oxidative assaults by deubiquitinating KEAP1 and protecting it from degradation leading to degradation of the NRF2 transcription factor that is responsible for mounting an anti-oxidation gene expression program 5. Positively regulates RNA virus-induced innate signaling by interacting with and deubiquitinating ERLIN1 and ERLIN2 6. In turn, restricts virus production by regulating cholesterol biosynthetic flux 7. Acts as a negative regulator of interleukin-17-mediated signaling and inflammation through the removal of 'Lys-63'- linked ubiquitination of TRAF5 and TRAF6 8. Prevents the ubiquitination and degradation of TRAF3 to reduce the phosphorylation levels of JNK and P38, the secretion of IL-1B and to induce endotoxin tolerance 9.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Hydrolase, Protease, Thiol protease
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Ubl conjugation pathway
Gene summary (Entrez)i

Useful information about the gene from Entrez

Ubiquitin (MIM 191339) is a highly conserved 76-amino acid protein involved in regulation of intracellular protein breakdown, cell cycle regulation, and stress response. Ubiquitin is released from degraded proteins by disassembly of the polyubiquitin chains, which is mediated by ubiquitin-specific proteases (USPs), such as USP25 (Valero et al., 1999).[supplied by OMIM, Mar 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
USP25-201
ENSP00000285679
ENST00000285679
Q9UHP3
[Direct mapping] Ubiquitin carboxyl-terminal hydrolase 25
Show all
Enzymes
   ENZYME proteins
   Hydrolases
   Peptidases
   Cysteine-type peptidases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004197 [cysteine-type endopeptidase activity]
GO:0004843 [cysteine-type deubiquitinase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0006508 [proteolysis]
GO:0006511 [ubiquitin-dependent protein catabolic process]
GO:0008233 [peptidase activity]
GO:0008234 [cysteine-type peptidase activity]
GO:0016579 [protein deubiquitination]
GO:0016787 [hydrolase activity]
GO:0019783 [ubiquitin-like protein peptidase activity]
GO:0031625 [ubiquitin protein ligase binding]
GO:0032183 [SUMO binding]
GO:0036211 [protein modification process]
GO:0043130 [ubiquitin binding]
GO:0051117 [ATPase binding]
GO:0070536 [protein K63-linked deubiquitination]
GO:0071108 [protein K48-linked deubiquitination]
GO:1904293 [negative regulation of ERAD pathway]
Show all
1055 aa
122.2 kDa
No 0
USP25-202
ENSP00000285681
ENST00000285681
Q9UHP3
[Direct mapping] Ubiquitin carboxyl-terminal hydrolase 25
Show all
Enzymes
   ENZYME proteins
   Hydrolases
   Peptidases
   Cysteine-type peptidases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004197 [cysteine-type endopeptidase activity]
GO:0004843 [cysteine-type deubiquitinase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0006508 [proteolysis]
GO:0006511 [ubiquitin-dependent protein catabolic process]
GO:0008233 [peptidase activity]
GO:0008234 [cysteine-type peptidase activity]
GO:0016579 [protein deubiquitination]
GO:0016787 [hydrolase activity]
GO:0019783 [ubiquitin-like protein peptidase activity]
GO:0031625 [ubiquitin protein ligase binding]
GO:0032183 [SUMO binding]
GO:0036211 [protein modification process]
GO:0043130 [ubiquitin binding]
GO:0051117 [ATPase binding]
GO:0070536 [protein K63-linked deubiquitination]
GO:0071108 [protein K48-linked deubiquitination]
GO:1904293 [negative regulation of ERAD pathway]
Show all
1087 aa
125.7 kDa
No 0
USP25-203
ENSP00000299574
ENST00000351097
Q96B65
[Direct mapping] USP25 protein; Ubiquitin carboxyl-terminal hydrolase 25
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004843 [cysteine-type deubiquitinase activity]
GO:0005515 [protein binding]
GO:0005829 [cytosol]
GO:0006511 [ubiquitin-dependent protein catabolic process]
GO:0016579 [protein deubiquitination]
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
Show all
450 aa
52.2 kDa
No 0
USP25-204
ENSP00000383044
ENST00000400183
Q9UHP3
[Direct mapping] Ubiquitin carboxyl-terminal hydrolase 25
Show all
Enzymes
   ENZYME proteins
   Hydrolases
   Peptidases
   Cysteine-type peptidases
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004197 [cysteine-type endopeptidase activity]
GO:0004843 [cysteine-type deubiquitinase activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005783 [endoplasmic reticulum]
GO:0005829 [cytosol]
GO:0006508 [proteolysis]
GO:0006511 [ubiquitin-dependent protein catabolic process]
GO:0008233 [peptidase activity]
GO:0008234 [cysteine-type peptidase activity]
GO:0016579 [protein deubiquitination]
GO:0016787 [hydrolase activity]
GO:0019783 [ubiquitin-like protein peptidase activity]
GO:0031625 [ubiquitin protein ligase binding]
GO:0032183 [SUMO binding]
GO:0036211 [protein modification process]
GO:0043130 [ubiquitin binding]
GO:0051117 [ATPase binding]
GO:0070536 [protein K63-linked deubiquitination]
GO:0071108 [protein K48-linked deubiquitination]
GO:1904293 [negative regulation of ERAD pathway]
Show all
1125 aa
130 kDa
No 0
USP25-205
ENSP00000402354
ENST00000449491
H7C1T8
[Direct mapping] Ubiquitin carboxyl-terminal hydrolase 25
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
229 aa
26.8 kDa
No 0
USP25-206
ENSP00000404086
ENST00000453553
H7C253
[Direct mapping] Ubiquitin carboxyl-terminal hydrolase 25
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004843 [cysteine-type deubiquitinase activity]
GO:0006511 [ubiquitin-dependent protein catabolic process]
GO:0016579 [protein deubiquitination]
Show all
204 aa
23.6 kDa
No 0

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