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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:44.3 nTPM
HPA Brain:84.0 nTPM
GTEx:44.3 nTPM
FANTOM5:159.7 Scaled Tags Per Million
Pig:63.5 nTPM
Mouse:19.1 nTPM
Allen mouse:0.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA009678Antibody HPA010095
Glial cells LowNot detected
Neuronal cells MediumLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 67.9
2481 Female, age 94, left hemisphere 119.7
2289 Male, age 61, right hemisphere 83.9
2288 Male, age 75, left hemisphere 69.4
1857 Female, age 85, left hemisphere 64.4
2290 Female, age 72, unknown 63.5
1854 Male, age 80, left hemisphere 57.5
1781 Male, age 74, unknown 42.9
2846 Female, age 79, unknown 41.8
Globus pallidus, externus
nTPM: 84.0
2646 Male, age 61, right hemisphere 111.6
1996 Male, age 80, right hemisphere 106.4
2567 Female, age 72, unknown 76.5
2772 Female, age 79, unknown 74.7
2395 Male, age 75, both hemispheres 50.8
Globus pallidus, internus
nTPM: 75.9
2483 Female, age 94, right hemisphere 96.2
2037 Male, age 80, right hemisphere 94.0
1818 Male, age 74, unknown 81.1
2111 Female, age 85, right hemisphere 67.7
2778 Female, age 91, both hemispheres 66.4
2566 Female, age 72, unknown 63.1
2287 Male, age 75, right hemisphere 63.0
Nucleus accumbens
nTPM: 58.9
2391 Female, age 94, left hemisphere 77.2
2286 Male, age 75, left hemisphere 72.4
2824 Male, age 61, right hemisphere 63.8
1806 Female, age 85, left hemisphere 63.4
2732 Male, age 80, right hemisphere 60.6
2698 Female, age 72, unknown 53.2
1856 Female, age 91, right hemisphere 41.3
1783 Male, age 74, unknown 39.6
Nucleus basalis of Meynert
nTPM: 70.3
2569 Male, age 61, both hemispheres 126.6
2393 Male, age 80, right hemisphere 60.2
2484 Female, age 94, left hemisphere 50.2
2821 Male, age 75, both hemispheres 44.1
Nucleus of the diagonal band
nTPM: 44.6
1812 Female, age 91, both hemispheres 51.2
1979 Male, age 74, unknown 50.7
2775 Male, age 80, right hemisphere 42.1
2029 Male, age 61, right hemisphere 39.8
2195 Female, age 85, both hemispheres 39.0
Putamen
nTPM: 60.1
2482 Female, age 94, left hemisphere 76.4
2647 Male, age 75, left hemisphere 69.7
1829 Male, age 74, unknown 66.3
2489 Female, age 72, unknown 61.5
1937 Female, age 91, right hemisphere 51.5
1838 Male, age 80, right hemisphere 49.9
2466 Female, age 79, unknown 45.2
Septal nuclei
nTPM: 52.8
2199 Male, age 80, right hemisphere 80.9
2009 Female, age 91, both hemispheres 61.1
2059 Female, age 85, both hemispheres 55.4
2629 Female, age 94, right hemisphere 52.6
2394 Male, age 61, left hemisphere 51.8
2031 Female, age 72, unknown 36.2
1960 Male, age 74, unknown 31.5
Stria terminalis, bed nucleus
nTPM: 44.6
2201 Male, age 74, unknown 46.4
1974 Female, age 91, both hemispheres 44.8
2486 Female, age 94, both hemispheres 42.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 44.3
Samples: 246

Max nTPM: 140.5
Min nTPM: 9.9
Std nTPM: 18.0
Median nTPM: 41.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 140.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 130.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 100.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 93.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 83.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 82.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 78.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 78.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 78.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 76.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 76.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 75.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 74.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 73.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 72.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 72.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 72.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 71.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 71.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 71.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 70.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 70.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 69.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 68.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 67.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 67.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 67.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 67.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 65.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 64.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 64.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 64.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 63.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 62.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 62.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 61.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 61.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 60.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 60.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 60.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 60.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 60.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 60.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 59.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 59.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 59.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 59.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 58.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 58.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 58.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 57.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 57.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 56.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 56.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 56.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 56.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 56.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 55.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 54.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 54.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 54.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 53.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 53.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 53.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 53.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 52.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 52.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 52.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 52.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 51.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 51.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 51.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 51.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 51.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 51.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 51.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 50.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 50.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 50.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 50.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 49.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 49.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 48.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 48.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 48.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 48.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 48.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 47.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 47.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 47.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 47.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 47.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 47.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 46.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 46.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 46.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 46.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 46.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 46.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 46.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 45.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 45.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 44.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 44.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 44.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 44.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 44.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 44.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 44.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 44.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 43.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 43.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 43.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 43.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 43.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 43.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 43.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 42.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 42.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 42.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 42.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 42.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 42.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 41.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 41.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 41.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 41.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 40.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 40.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 39.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 39.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 39.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 39.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 39.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 39.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 38.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 38.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 38.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 37.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 37.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 37.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 37.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 37.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 37.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 36.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 36.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 36.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 36.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 36.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 35.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 35.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 35.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 35.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 35.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 35.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 35.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 34.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 34.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 34.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 34.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 34.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 34.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 34.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 34.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 34.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 33.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 33.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 33.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 33.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 33.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 33.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 33.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 33.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 33.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 33.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 33.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 32.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 32.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 32.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 32.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 32.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 31.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 31.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 31.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 31.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 31.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 31.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 30.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 30.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 30.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 30.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 30.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 29.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 29.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 29.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 29.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 29.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 29.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 29.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 29.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 29.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 29.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 28.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 28.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 28.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 28.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 28.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 28.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 28.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 28.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 27.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 27.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 27.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 27.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 27.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 27.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 26.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 26.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 26.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 26.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 26.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 25.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 25.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 25.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 25.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 25.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 25.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 24.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 24.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 24.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 23.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 22.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 21.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 21.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 21.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 21.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 20.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 19.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 19.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 17.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 16.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 16.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 14.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 12.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 10.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 9.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 33.2
Samples: 246

Max nTPM: 138.5
Min nTPM: 7.8
Std nTPM: 15.9
Median nTPM: 30.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 138.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 94.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 87.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 77.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 71.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 71.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 70.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 69.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 68.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 68.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 67.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 65.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 63.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 61.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 60.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 59.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 58.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 58.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 57.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 57.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 56.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 56.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 55.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 55.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 54.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 54.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 52.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 52.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 51.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 49.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 49.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 48.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 48.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 48.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 48.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 47.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 47.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 47.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 46.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 46.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 46.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 45.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 45.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 44.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 43.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 43.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 43.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 42.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 41.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 41.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 41.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 41.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 41.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 40.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 40.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 40.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 40.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 40.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 39.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 39.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 38.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 38.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 38.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 38.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 38.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 37.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 37.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 37.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 37.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 36.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 36.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 36.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 36.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 36.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 36.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 35.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 35.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 35.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 35.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 35.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 35.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 35.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 35.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 35.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 35.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 35.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 34.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 34.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 34.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 34.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 34.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 34.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 34.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 34.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 34.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 34.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 34.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 33.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 33.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 33.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 33.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 33.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 32.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 32.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 32.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 31.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 31.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 31.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 31.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 31.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 31.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 31.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 31.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 31.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 31.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 31.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 30.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 30.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 30.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 30.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 30.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 30.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 30.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 30.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 30.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 30.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 30.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 29.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 29.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 29.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 29.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 29.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 29.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 29.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 29.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 29.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 28.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 28.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 28.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 28.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 28.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 28.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 28.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 27.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 27.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 27.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 27.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 27.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 26.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 26.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 26.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 26.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 26.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 26.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 26.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 26.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 26.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 26.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 25.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 25.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 25.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 25.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 25.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 25.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 25.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 25.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 25.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 25.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 24.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 24.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 24.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 24.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 24.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 24.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 24.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 24.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 24.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 23.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 23.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 23.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 23.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 23.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 22.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 22.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 22.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 22.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 22.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 22.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 21.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 21.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 21.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 21.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 21.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 21.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 21.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 21.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 21.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 21.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 21.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 20.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 20.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 20.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 20.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 20.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 20.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 20.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 20.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 20.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 19.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 19.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 19.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 19.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 19.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 19.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 19.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 18.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 18.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 17.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 17.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 17.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 17.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 17.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 17.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 16.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 16.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 16.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 16.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 16.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 16.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 15.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 15.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 15.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 15.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 14.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 14.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 14.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 14.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 14.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 14.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 13.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 12.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 11.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 10.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 10.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 10.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 7.8
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Brain - Putamen (basal ganglia)
Average nTPM: 41.6
Samples: 205

Max nTPM: 117.0
Min nTPM: 10.1
Std nTPM: 17.0
Median nTPM: 38.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 117.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 92.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 84.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 82.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 81.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 80.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 72.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 72.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 71.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 71.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 69.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 68.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 68.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 68.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 68.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 68.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 67.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 67.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 67.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 66.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 66.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 63.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 62.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 62.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 62.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 61.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 61.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 60.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 60.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 59.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 58.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 58.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 58.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 57.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 57.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 56.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 55.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 55.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 55.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 55.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 55.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 54.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 54.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 54.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 54.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 54.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 54.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 53.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 53.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 53.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 53.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 52.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 52.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 52.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 51.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 51.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 51.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 51.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 49.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 49.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 49.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 49.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 49.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 48.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 48.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 48.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 48.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 48.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 47.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 47.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 47.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 46.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 46.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 46.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 45.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 45.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 44.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 44.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 44.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 44.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 44.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 44.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 44.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 43.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 43.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 43.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 43.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 43.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 42.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 42.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 42.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 42.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 41.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 41.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 41.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 41.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 40.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 40.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 40.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 39.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 38.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 38.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 38.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 37.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 37.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 37.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 37.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 36.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 36.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 36.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 36.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 36.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 36.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 35.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 35.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 35.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 35.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 35.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 35.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 35.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 35.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 35.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 34.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 34.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 34.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 34.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 33.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 33.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 33.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 33.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 33.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 33.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 32.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 32.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 32.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 32.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 32.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 32.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 32.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 32.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 32.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 32.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 31.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 31.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 31.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 31.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 31.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 31.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 31.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 31.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 30.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 30.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 30.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 30.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 29.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 29.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 29.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 29.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 29.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 28.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 28.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 28.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 28.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 28.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 27.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 27.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 26.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 26.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 25.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 25.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 25.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 25.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 24.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 24.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 24.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 24.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 24.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 24.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 24.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 23.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 23.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 22.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 22.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 22.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 22.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 22.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 22.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 20.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 20.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 20.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 19.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 18.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 18.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 17.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 17.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 17.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 16.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 15.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 14.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 13.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 11.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 11.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 11.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 10.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 10.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

159.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 121.9
FF:10164-103B2 76 years, female 121.9
Nucleus accumbens
Scaled Tags Per Million: 126.6
FF:10037-101F1 23-56 years, mixed 126.6
Putamen
Scaled Tags Per Million: 109.4
FF:10176-103C5 60 years, female 109.4
Globus pallidus
Scaled Tags Per Million: 159.7
FF:10175-103C4 60 years, female 190.6
FF:10161-103A8 76 years, female 128.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.5
Pig sample Sample description nTPM
Caudate
nTPM: 48.1
Samples: 4

Max nTPM: 52.4
Min nTPM: 43.0
Sample A Female 43.0
Sample B Female 52.4
Sample C Male 50.3
Sample D Male 46.7
Putamen
nTPM: 63.5
Samples: 4

Max nTPM: 75.8
Min nTPM: 50.1
Sample A Female 75.8
Sample B Female 50.1
Sample C Male 64.1
Sample D Male 64.1
Septum
nTPM: 53.6
Samples: 4

Max nTPM: 67.6
Min nTPM: 47.9
Sample A Female 47.9
Sample B Female 49.6
Sample C Male 49.4
Sample D Male 67.6
Ventral pallidum
nTPM: 60.5
Samples: 4

Max nTPM: 72.8
Min nTPM: 43.1
Sample A Female 43.1
Sample B Female 61.6
Sample C Male 64.5
Sample D Male 72.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 19.1
Samples: 4

Max nTPM: 21.7
Min nTPM: 15.8
Sample A Male 15.8
Sample B Male 17.5
Sample C Female 21.7
Sample D Female 21.4
Septum
nTPM: 16.9
Samples: 4

Max nTPM: 20.7
Min nTPM: 13.5
Sample A Male 13.5
Sample B Male 17.4
Sample C Female 15.8
Sample D Female 20.7
Ventral forebrain
nTPM: 15.3
Samples: 4

Max nTPM: 17.9
Min nTPM: 13.0
Sample A Male 17.9
Sample B Male 13.0
Sample C Female 14.5
Sample D Female 15.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.2
70919967 Antisense, RP_050713_02_D10, Mouse strain C57BL/6J (56 days, male) 0.3
70528133 Antisense, RP_050623_01_H06, Mouse strain C57BL/6J (56 days, male) 0.2
74988591 Antisense, RP_060315_05_F04, Mouse strain C57BL/6J (56 days, male) 0.2
Pallidum
Expression energy: 0.2
74988591 Antisense, RP_060315_05_F04, Mouse strain C57BL/6J (56 days, male) 0.3
70919967 Antisense, RP_050713_02_D10, Mouse strain C57BL/6J (56 days, male) 0.2
70528133 Antisense, RP_050623_01_H06, Mouse strain C57BL/6J (56 days, male) 0.1

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