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C2CD6
HPA
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  • C2CD6
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

C2CD6
Synonyms ALS2CR11, FLJ25351
Gene descriptioni

Full gene name according to HGNC.

C2 calcium dependent domain containing 6
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 2
Cytoband q33.1
Chromosome location (bp) 201487421 - 201619178
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000155754 (version 109)
Entrez gene 151254
HGNC HGNC:14438
UniProt Q53TS8 (UniProt - Evidence at protein level)
neXtProt NX_Q53TS8
GeneCards C2CD6
Antibodypedia C2CD6 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Auxiliary component of the CatSper complex, a complex involved in sperm cell hyperactivation. Sperm cell hyperactivation is needed for sperm motility which is essential late in the preparation of sperm for fertilization. Required for CatSper complex targeting and trafficking into the quadrilinear nanodomains. Targets the preassembled CatSper complexes to elongating flagella, where it links the channel-carrying vesicles and motor proteins.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

An autosomal recessive form of juvenile amyotrophic lateral sclerosis was originally mapped to a region of chromosome 2 that includes this gene. The encoded protein contains a calcium-dependent membrane targeting C2 domain. This domain is often found in proteins that are involved in membrane trafficking and signal transduction. [provided by RefSeq, Jun 2016]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
C2CD6-201
ENSP00000286195
ENST00000286195
Q53TS8
[Direct mapping] Cation channel sperm-associated targeting subunit tau
Show all
A0A140VJE2
[Target identity:100%; Query identity:100%] Testicular tissue protein Li 16
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0007283 [spermatogenesis]
GO:0016020 [membrane]
GO:0030317 [flagellated sperm motility]
GO:0031514 [motile cilium]
GO:0036128 [CatSper complex]
GO:0042995 [cell projection]
GO:0048240 [sperm capacitation]
GO:0097228 [sperm principal piece]
GO:0098876 [vesicle-mediated transport to the plasma membrane]
Show all
623 aa
71.2 kDa
No 0
C2CD6-202
ENSP00000409937
ENST00000439140
Q53TS8
[Direct mapping] Cation channel sperm-associated targeting subunit tau
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0007283 [spermatogenesis]
GO:0016020 [membrane]
GO:0030317 [flagellated sperm motility]
GO:0031514 [motile cilium]
GO:0036128 [CatSper complex]
GO:0042995 [cell projection]
GO:0048240 [sperm capacitation]
GO:0097228 [sperm principal piece]
GO:0098876 [vesicle-mediated transport to the plasma membrane]
Show all
1820 aa
209.1 kDa
No 0
C2CD6-203
ENSP00000400672
ENST00000439802
Q53TS8
[Direct mapping] Cation channel sperm-associated targeting subunit tau
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0007283 [spermatogenesis]
GO:0016020 [membrane]
GO:0030317 [flagellated sperm motility]
GO:0031514 [motile cilium]
GO:0036128 [CatSper complex]
GO:0042995 [cell projection]
GO:0048240 [sperm capacitation]
GO:0097228 [sperm principal piece]
GO:0098876 [vesicle-mediated transport to the plasma membrane]
Show all
395 aa
45.2 kDa
No 0
C2CD6-204
ENSP00000399016
ENST00000450242
Q53TS8
[Direct mapping] Cation channel sperm-associated targeting subunit tau
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0005515 [protein binding]
GO:0005886 [plasma membrane]
GO:0005929 [cilium]
GO:0007283 [spermatogenesis]
GO:0016020 [membrane]
GO:0030317 [flagellated sperm motility]
GO:0031514 [motile cilium]
GO:0036128 [CatSper complex]
GO:0042995 [cell projection]
GO:0048240 [sperm capacitation]
GO:0097228 [sperm principal piece]
GO:0098876 [vesicle-mediated transport to the plasma membrane]
Show all
550 aa
62.4 kDa
No 0

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