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VBP1
HPA
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  • VBP1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

VBP1
Synonyms PFD3, PFDN3
Gene descriptioni

Full gene name according to HGNC.

VHL binding protein 1
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome X
Cytoband q28
Chromosome location (bp) 155197007 - 155239841
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000155959 (version 109)
Entrez gene 7411
HGNC HGNC:12662
UniProt P61758 (UniProt - Evidence at protein level)
neXtProt NX_P61758
GeneCards VBP1
Antibodypedia VBP1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Chaperone
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene interacts with the Von Hippel-Lindau protein to form an intracellular complex. The encoded protein functions as a chaperone protein, and may play a role in the transport of the Von Hippel-Lindau protein from the perinuclear granules to the nucleus or cytoplasm. Alternative splicing and the use of alternate transcription start sites results in multiple transcript variants encoding different protein isoforms. [provided by RefSeq, Jan 2015]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
VBP1-201
ENSP00000286428
ENST00000286428
P61758
[Direct mapping] Prefoldin subunit 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001540 [amyloid-beta binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005844 [polysome]
GO:0006457 [protein folding]
GO:0007017 [microtubule-based process]
GO:0007021 [tubulin complex assembly]
GO:0015631 [tubulin binding]
GO:0016272 [prefoldin complex]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0050821 [protein stabilization]
GO:0051082 [unfolded protein binding]
GO:1905907 [negative regulation of amyloid fibril formation]
Show all
197 aa
22.6 kDa
No 0
VBP1-203
ENSP00000438694
ENST00000535916
P61758
[Direct mapping] Prefoldin subunit 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001540 [amyloid-beta binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005844 [polysome]
GO:0006457 [protein folding]
GO:0007017 [microtubule-based process]
GO:0007021 [tubulin complex assembly]
GO:0015631 [tubulin binding]
GO:0016272 [prefoldin complex]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0050821 [protein stabilization]
GO:0051082 [unfolded protein binding]
GO:1905907 [negative regulation of amyloid fibril formation]
Show all
192 aa
22.3 kDa
No 0
VBP1-204
ENSP00000486053
ENST00000625964
P61758
[Direct mapping] Prefoldin subunit 3
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001540 [amyloid-beta binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005844 [polysome]
GO:0006457 [protein folding]
GO:0007017 [microtubule-based process]
GO:0007021 [tubulin complex assembly]
GO:0015631 [tubulin binding]
GO:0016272 [prefoldin complex]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0050821 [protein stabilization]
GO:0051082 [unfolded protein binding]
GO:1905907 [negative regulation of amyloid fibril formation]
Show all
192 aa
22.3 kDa
No 0

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