PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:111.2 nTPM
FANTOM5:271.3 Scaled Tags Per Million
Pig:70.6 nTPM
Mouse:82.5 nTPM
Allen mouse:1.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 111.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 78.3
2188 Female, age 91, both hemispheres 89.8
2301 Female, age 85, both hemispheres 78.4
1984 Male, age 76, both hemispheres 75.2
2090 Male, age 80, both hemispheres 70.0
Area postrema
nTPM: 93.3
2054 Male, age 76, both hemispheres 105.3
2799 Male, age 61, both hemispheres 90.7
2306 Male, age 80, both hemispheres 84.0
Dorsal cochlear nucleus
nTPM: 85.1
2058 Male, age 76, both hemispheres 93.0
2187 Female, age 91, both hemispheres 84.6
2378 Male, age 80, both hemispheres 83.2
2802 Male, age 74, right hemisphere 82.8
2370 Male, age 61, both hemispheres 81.9
Dorsal medullary reticular nucleus
nTPM: 96.2
2040 Female, age 85, both hemispheres 104.7
2088 Male, age 76, both hemispheres 92.8
2373 Male, age 61, both hemispheres 91.2
Dorsal motor vagal complex
nTPM: 97.7
2813 Female, age 72, unknown 120.7
2000 Male, age 74, unknown 117.5
2133 Female, age 91, both hemispheres 104.4
2844 Male, age 55, unknown 98.2
2185 Male, age 76, both hemispheres 95.7
2643 Male, age 74, both hemispheres 89.6
2797 Male, age 61, both hemispheres 79.0
2807 Female, age 85, both hemispheres 76.7
Dorsal tegmental nucleus
nTPM: 86.2
2083 Male, age 80, both hemispheres 94.8
2326 Male, age 74, both hemispheres 93.3
1936 Male, age 76, left hemisphere 91.4
2358 Male, age 61, both hemispheres 65.5
Dorsolateral tegmental area
nTPM: 92.9
2654 Male, age 80, both hemispheres 106.8
2751 Female, age 85, both hemispheres 98.7
2360 Male, age 74, both hemispheres 92.5
2141 Male, age 76, both hemispheres 91.1
2337 Male, age 61, both hemispheres 75.5
Gigantocellular reticular nuclei, medullary
nTPM: 87.6
2022 Male, age 76, right hemisphere 109.7
1876 Female, age 85, both hemispheres 104.6
2314 Male, age 61, both hemispheres 88.2
2387 Female, age 91, both hemispheres 85.4
2462 Male, age 74, both hemispheres 73.3
2310 Male, age 80, both hemispheres 64.7
Gigantocellular reticular nuclei, pars
nTPM: 84.7
2084 Female, age 85, both hemispheres 97.3
2336 Male, age 61, both hemispheres 96.7
2168 Male, age 76, both hemispheres 93.0
2706 Male, age 80, both hemispheres 69.4
2330 Male, age 80, both hemispheres 67.4
Inferior olive
nTPM: 94.6
2563 Male, age 74, both hemispheres 102.9
2178 Male, age 61, both hemispheres 96.6
2085 Female, age 85, both hemispheres 91.8
2628 Female, age 91, both hemispheres 91.6
2379 Male, age 80, both hemispheres 89.9
Kolliker-Fuse nucleus
nTPM: 111.2
2315 Male, age 76, right hemisphere 124.5
2163 Male, age 80, both hemispheres 123.7
2793 Female, age 91, left hemisphere 85.4
Lateral lemniscal nuclei
nTPM: 84.5
2169 Male, age 76, both hemispheres 98.7
2036 Male, age 80, both hemispheres 87.0
2320 Female, age 91, left hemisphere 80.5
2746 Female, age 85, left hemisphere 78.2
2453 Male, age 74, right hemisphere 78.0
Lateral medullary reticular nucleus
nTPM: 102.2
2374 Male, age 61, both hemispheres 111.1
2044 Male, age 76, both hemispheres 110.3
2305 Male, age 74, both hemispheres 105.6
2190 Female, age 85, both hemispheres 96.5
2804 Female, age 91, both hemispheres 96.5
2852 Male, age 80, both hemispheres 92.8
Lateral parabrachial nucleus
nTPM: 94.3
2792 Male, age 76, both hemispheres 115.1
2139 Female, age 85, right hemisphere 96.6
2013 Male, age 80, both hemispheres 91.1
2790 Male, age 61, both hemispheres 74.4
Lateral vestibular nucleus
nTPM: 107.1
2184 Male, age 76, both hemispheres 124.3
2311 Male, age 80, both hemispheres 89.9
Locus coeruleus
nTPM: 105.1
2788 Male, age 74, unknown 127.7
2014 Male, age 55, unknown 116.8
2720 Male, age 74, both hemispheres 102.1
2317 Female, age 72, unknown 99.7
2162 Male, age 80, both hemispheres 97.0
1980 Male, age 76, both hemispheres 96.6
2123 Female, age 91, both hemispheres 95.4
Medial olivary nucleus
nTPM: 92.8
2138 Female, age 91, both hemispheres 101.8
1943 Male, age 61, both hemispheres 92.1
2851 Male, age 80, both hemispheres 88.8
1962 Male, age 76, both hemispheres 88.7
Medial parabrachial nucleus
nTPM: 86.1
2786 Male, age 76, both hemispheres 90.9
2170 Female, age 91, both hemispheres 90.6
2854 Male, age 80, both hemispheres 88.8
2156 Male, age 61, both hemispheres 83.2
2463 Female, age 85, right hemisphere 76.9
Medial periolivary nuclei
nTPM: 88.3
2791 Male, age 74, right hemisphere 105.1
2063 Male, age 76, both hemispheres 98.6
2171 Female, age 85, both hemispheres 94.7
2458 Female, age 91, both hemispheres 77.8
2081 Male, age 80, both hemispheres 65.5
Medial vestibular nucleus
nTPM: 103.9
2803 Female, age 91, both hemispheres 115.9
2134 Male, age 76, both hemispheres 112.8
2801 Male, age 74, both hemispheres 104.8
2093 Male, age 80, both hemispheres 101.0
2743 Female, age 85, both hemispheres 94.4
2624 Male, age 61, both hemispheres 94.3
Motor facial nucleus
nTPM: 90.3
2062 Male, age 76, both hemispheres 103.2
2365 Male, age 74, right hemisphere 98.2
2697 Female, age 85, both hemispheres 95.7
2126 Male, age 61, both hemispheres 90.9
2795 Female, age 91, both hemispheres 80.0
2327 Male, age 80, both hemispheres 73.7
Motor hypoglossal nucleus
nTPM: 100.0
2461 Male, age 61, both hemispheres 108.3
2125 Female, age 91, both hemispheres 108.0
2132 Female, age 85, both hemispheres 101.2
2277 Male, age 76, both hemispheres 96.2
2182 Male, age 80, both hemispheres 86.5
Motor trigeminal nucleus
nTPM: 84.4
2309 Male, age 76, both hemispheres 102.3
2079 Male, age 80, both hemispheres 82.4
2335 Male, age 61, both hemispheres 82.0
2321 Female, age 91, both hemispheres 78.4
2560 Male, age 74, both hemispheres 77.1
Nuclei of the trapezoid body
nTPM: 91.4
2159 Male, age 61, both hemispheres 116.7
1983 Male, age 76, both hemispheres 94.8
2735 Female, age 85, both hemispheres 87.9
2166 Male, age 80, both hemispheres 80.1
2368 Female, age 91, both hemispheres 77.6
Nucleus ambiguus
nTPM: 88.5
2071 Male, age 76, both hemispheres 103.8
2096 Female, age 85, both hemispheres 73.2
Nucleus cuneatus
nTPM: 85.4
2100 Male, age 76, both hemispheres 90.2
2564 Male, age 74, both hemispheres 89.0
2805 Female, age 91, both hemispheres 88.6
2380 Male, age 80, both hemispheres 86.1
2381 Male, age 80, both hemispheres 85.8
2131 Male, age 76, both hemispheres 83.6
2376 Male, age 61, both hemispheres 83.2
2808 Female, age 85, both hemispheres 83.0
2562 Male, age 61, both hemispheres 79.3
Nucleus gracilis
nTPM: 83.9
2627 Male, age 74, both hemispheres 102.8
2382 Male, age 80, both hemispheres 77.3
2299 Female, age 85, both hemispheres 71.5
Nucleus raphe magnus
nTPM: 87.1
2160 Male, age 61, both hemispheres 101.7
2455 Male, age 74, both hemispheres 91.9
2051 Male, age 76, both hemispheres 88.1
2172 Female, age 85, both hemispheres 83.1
2328 Male, age 80, both hemispheres 79.8
2459 Female, age 91, both hemispheres 77.7
Nucleus raphe obscurus
nTPM: 96.7
2800 Male, age 61, midline 102.0
2142 Male, age 76, midline 96.0
2845 Female, age 85, midline 92.0
Nucleus raphe pallidus
nTPM: 90.2
2183 Male, age 80, midline 91.4
2145 Male, age 76, midline 89.9
1924 Male, age 61, midline 89.2
Nucleus tractus solitarii
nTPM: 86.7
2144 Female, age 91, right hemisphere 115.8
2656 Male, age 76, both hemispheres 91.6
2191 Female, age 85, both hemispheres 74.5
2307 Male, age 80, both hemispheres 64.8
Paramedian reticular nucleus
nTPM: 99.9
2052 Male, age 76, both hemispheres 106.3
2057 Male, age 80, both hemispheres 105.9
2050 Female, age 85, both hemispheres 100.3
2313 Male, age 61, both hemispheres 87.1
Parvicellular reticular nuclei
nTPM: 89.2
2095 Male, age 76, both hemispheres 97.4
2119 Male, age 80, both hemispheres 95.1
2558 Male, age 74, both hemispheres 75.2
Parvicellular reticular nuclei, medullary
nTPM: 101.2
2189 Female, age 91, both hemispheres 105.5
2091 Female, age 85, both hemispheres 102.2
2181 Male, age 80, left hemisphere 95.9
Pedunculopontine tegmental nucleus
nTPM: 102.5
1921 Female, age 85, both hemispheres 107.2
2338 Male, age 61, both hemispheres 100.5
2334 Male, age 80, both hemispheres 99.7
Peritrigeminal nucleus
nTPM: 95.1
2179 Male, age 61, both hemispheres 100.1
2136 Male, age 76, both hemispheres 99.6
2067 Female, age 85, both hemispheres 85.5
Pontine nuclei
nTPM: 88.7
2727 Male, age 61, right hemisphere 111.4
2454 Male, age 74, left hemisphere 99.9
1863 Male, age 55, unknown 94.7
1968 Male, age 76, left hemisphere 91.4
2109 Female, age 72, unknown 82.6
2787 Female, age 85, both hemispheres 80.0
2319 Female, age 91, both hemispheres 77.8
2115 Male, age 80, left hemisphere 72.0
Pontine raphe nucleus
nTPM: 101.1
2853 Male, age 76, midline 112.8
2122 Female, age 85, midline 89.4
Posteroventral cochlear nucleus
nTPM: 84.7
2070 Male, age 76, both hemispheres 98.0
2752 Female, age 85, both hemispheres 92.2
2135 Female, age 91, both hemispheres 83.0
2371 Male, age 61, both hemispheres 79.2
2341 Male, age 80, both hemispheres 71.1
Prepositus hypoglossal nucleus
nTPM: 94.8
2855 Female, age 85, right hemisphere 95.7
2086 Male, age 80, both hemispheres 94.0
Principal sensory trigeminal nucleus
nTPM: 97.5
2324 Male, age 76, both hemispheres 126.5
2158 Male, age 61, both hemispheres 106.4
2008 Male, age 80, left hemisphere 81.9
2367 Female, age 91, left hemisphere 75.2
Reticular pontine nucleus, caudal
nTPM: 87.8
2559 Male, age 74, both hemispheres 98.2
2092 Male, age 76, both hemispheres 94.5
2332 Male, age 80, right hemisphere 79.9
2457 Female, age 91, both hemispheres 78.5
Reticular pontine nucleus, oral
nTPM: 94.5
1939 Male, age 80, both hemispheres 113.6
2167 Male, age 76, both hemispheres 104.7
2366 Female, age 91, both hemispheres 98.3
2012 Female, age 85, both hemispheres 94.6
2361 Male, age 74, both hemispheres 61.3
Reticulotegmental nucleus
nTPM: 86.8
2325 Male, age 76, both hemispheres 102.8
2452 Male, age 74, both hemispheres 82.3
2322 Female, age 91, both hemispheres 81.5
2333 Male, age 80, both hemispheres 80.7
Spinal trigeminal nucleus, caudal
nTPM: 96.5
2390 Female, age 91, both hemispheres 117.5
2642 Male, age 74, both hemispheres 103.8
2312 Male, age 61, both hemispheres 88.2
2308 Male, age 80, both hemispheres 87.2
2447 Male, age 76, both hemispheres 85.8
Spinal trigeminal nucleus, interpolar
nTPM: 111.0
2625 Male, age 61, both hemispheres 164.4
2066 Male, age 76, right hemisphere 103.3
2386 Female, age 85, both hemispheres 97.8
2033 Male, age 80, both hemispheres 96.4
2389 Female, age 91, both hemispheres 93.3
Spinal trigeminal nucleus, oral
nTPM: 95.4
1978 Male, age 76, both hemispheres 102.0
2737 Female, age 85, both hemispheres 92.4
2164 Male, age 80, both hemispheres 91.7
Spinal vestibular nucleus
nTPM: 103.1
2806 Female, age 85, both hemispheres 117.1
2748 Male, age 76, both hemispheres 108.1
2186 Female, age 91, both hemispheres 106.9
2780 Male, age 80, both hemispheres 101.4
2384 Male, age 74, both hemispheres 97.5
2796 Male, age 61, both hemispheres 87.4
Subcoeruleus area
nTPM: 93.3
2369 Female, age 85, left hemisphere 104.3
1958 Male, age 80, both hemispheres 95.1
2451 Male, age 74, both hemispheres 93.1
2323 Female, age 91, left hemisphere 89.2
2089 Male, age 76, left hemisphere 84.6
Superior olive
nTPM: 87.6
2364 Male, age 74, right hemisphere 103.5
2020 Male, age 76, both hemispheres 92.4
1875 Female, age 85, both hemispheres 88.5
2561 Female, age 91, both hemispheres 80.8
2329 Male, age 80, right hemisphere 72.7
Superior vestibular nucleus
nTPM: 99.1
2383 Male, age 74, both hemispheres 104.1
2015 Male, age 80, both hemispheres 98.7
2061 Male, age 76, both hemispheres 94.7
Ventral medullary reticular nucleus
nTPM: 103.2
2060 Male, age 76, both hemispheres 105.7
2372 Male, age 61, both hemispheres 100.7
Ventral periolivary nuclei
nTPM: 90.5
2023 Male, age 76, both hemispheres 98.4
2130 Female, age 85, both hemispheres 97.0
2165 Male, age 80, both hemispheres 88.9
2794 Female, age 91, left hemisphere 77.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 89.8
1986 Male, age 76, both hemispheres 102.3
2741 Female, age 85, both hemispheres 91.7
2180 Male, age 61, both hemispheres 88.9
2302 Female, age 91, both hemispheres 88.7
2118 Male, age 80, both hemispheres 77.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 86.0
2359 Male, age 61, both hemispheres 107.3
1959 Male, age 76, both hemispheres 93.9
2449 Male, age 74, both hemispheres 87.2
2840 Female, age 85, both hemispheres 86.3
2161 Male, age 80, both hemispheres 71.0
2456 Female, age 91, both hemispheres 70.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 271.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 185.0
FF:10182-103D2 60 years, female 185.5
FF:10165-103B3 76 years, female 184.5
Medulla oblongata
Scaled Tags Per Million: 163.1
FF:10038-101F2 18-64 years, mixed 234.5
FF:10155-103A2 76 years, female 137.2
FF:10174-103C3 60 years, female 117.8
Pons
Scaled Tags Per Million: 271.3
FF:10033-101E6 18-54 years, mixed 271.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 70.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 64.4
Samples: 4

Max nTPM: 76.4
Min nTPM: 51.5
Sample A Female 76.4
Sample B Female 59.4
Sample C Male 70.1
Sample D Male 51.5
Pons
nTPM: 70.6
Samples: 4

Max nTPM: 78.8
Min nTPM: 61.0
Sample A Female 76.5
Sample B Female 61.0
Sample C Male 78.8
Sample D Male 66.2

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 82.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 82.5
Samples: 4

Max nTPM: 87.3
Min nTPM: 76.9
Sample A Male 76.9
Sample B Male 87.0
Sample C Female 78.9
Sample D Female 87.3

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.1
1656 Antisense, RP_040604_01_C08, Mouse strain C57BL/6J (56 days, male) 1.1
1655 Antisense, RP_040604_01_C08, Mouse strain C57BL/6J (56 days, male) 0.4
Pons
Expression energy: 0.7
1656 Antisense, RP_040604_01_C08, Mouse strain C57BL/6J (56 days, male) 0.7
1655 Antisense, RP_040604_01_C08, Mouse strain C57BL/6J (56 days, male) 0.5

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