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RPL30
HPA
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  • RPL30
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:905.4 nTPM
FANTOM5:297.3 Scaled Tags Per Million
Pig:84.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002651
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

905.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 905.4
Samples: 246

Max nTPM: 2318.1
Min nTPM: 383.9
Std nTPM: 266.5
Median nTPM: 845.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 2318.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 2073.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1744.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1726.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1695.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1644.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 1617.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1612.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1524.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1495.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1487.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 1430.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 1392.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 1380.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1376.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1352.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1349.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1329.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1287.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1282.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1271.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1252.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1230.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1229.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1181.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1177.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1176.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1174.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1173.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1164.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1158.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1153.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1145.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1139.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 1133.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1128.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1128.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1118.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1117.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1112.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1106.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1101.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1100.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1098.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1093.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1091.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1088.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1084.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1084.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1079.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1060.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1058.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1055.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1055.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1049.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1045.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1045.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1044.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1042.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1040.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1039.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1036.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1032.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1030.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1028.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1028.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1028.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1026.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1023.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1017.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1002.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 999.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 992.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 992.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 987.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 984.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 974.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 972.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 971.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 970.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 970.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 965.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 963.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 959.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 954.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 949.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 946.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 940.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 935.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 933.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 932.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 931.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 929.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 924.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 922.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 920.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 919.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 918.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 898.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 893.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 886.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 885.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 881.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 880.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 878.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 875.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 873.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 870.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 869.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 865.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 865.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 863.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 855.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 855.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 853.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 851.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 850.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 849.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 848.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 847.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 847.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 846.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 845.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 845.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 845.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 845.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 841.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 833.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 832.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 830.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 826.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 826.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 826.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 824.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 823.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 822.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 821.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 821.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 821.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 817.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 815.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 811.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 809.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 807.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 807.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 807.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 805.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 805.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 797.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 796.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 795.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 795.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 795.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 794.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 792.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 790.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 788.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 788.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 788.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 783.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 780.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 779.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 778.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 775.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 775.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 769.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 767.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 762.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 762.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 760.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 755.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 754.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 754.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 751.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 747.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 747.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 747.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 747.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 742.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 741.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 740.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 740.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 740.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 740.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 738.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 735.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 734.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 731.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 729.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 728.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 723.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 714.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 708.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 704.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 699.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 698.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 693.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 689.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 686.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 682.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 679.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 678.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 678.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 675.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 675.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 674.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 674.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 671.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 669.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 666.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 666.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 666.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 665.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 662.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 654.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 650.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 649.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 648.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 643.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 641.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 637.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 636.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 633.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 632.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 631.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 620.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 618.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 617.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 613.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 606.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 605.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 599.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 596.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 595.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 594.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 589.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 577.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 575.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 571.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 561.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 560.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 554.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 549.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 522.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 492.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 383.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

297.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 297.3
FF:10164-103B2 76 years, female 297.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.2
Pig sample Sample description nTPM
Caudate
nTPM: 84.2
Samples: 4

Max nTPM: 93.8
Min nTPM: 69.5
Sample A Female 93.8
Sample B Female 93.2
Sample C Male 80.3
Sample D Male 69.5

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