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RPL30
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TISSUE PRIMARY DATA SMALL INTESTINE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Small intestine
Tissue proteome
Intestine
SMALL INTESTINE - Expression summary
Protein expression
Small intestinei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1738.1 nTPM
HPA:1184.2 nTPM
GTEx:1738.1 nTPM
FANTOM5:638.4 Scaled Tags Per Million

SMALL INTESTINE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002651
Glandular cells Medium



SMALL INTESTINE - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1184.2
overview
Male, age 65
Small intestine sample 232
nTPM: 1463.3
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40

overview
Male, age 39
Small intestine sample 233
nTPM: 1167.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55

overview
Male, age 68
Small intestine sample 234
nTPM: 1055
Cell types%
Glandular cells:
30

Smooth muscle cells:
15

Other cell types:
55

N/A
Male, age 85
Small intestine sample 235
nTPM: 1050.9

SMALL INTESTINE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1738.1
GTEx sample id Sample description nTPM
Small Intestine - Terminal Ileum
Average nTPM: 1738.1
Samples: 187

Max nTPM: 4174.8
Min nTPM: 869.9
Std nTPM: 603.2
Median nTPM: 1588.0
GTEX-1NSGN-2126-SM-DPRYN 50-59 years, male 4174.8
GTEX-1EMGI-2826-SM-7IGMR 60-69 years, male 3866.5
GTEX-1MGNQ-2326-SM-EV7BG 40-49 years, male 3761.6
GTEX-1JJE9-2226-SM-CXZJM 70-79 years, male 3690.6
GTEX-1PIEJ-1526-SM-E6CP8 20-29 years, female 3302.5
GTEX-1GMR3-2726-SM-7MKFB 40-49 years, male 3257.5
GTEX-1RAZQ-2226-SM-DPRZR 30-39 years, male 3218.9
GTEX-1R9K4-2326-SM-E6CRB 60-69 years, male 3136.2
GTEX-1QP28-1726-SM-E6CRK 50-59 years, female 2976.4
GTEX-11TUW-1926-SM-5BC58 60-69 years, male 2938.3
GTEX-14PK6-1626-SM-6871I 70-79 years, female 2888.5
GTEX-148VJ-2226-SM-5NQ9M 70-79 years, male 2880.4
GTEX-183FY-1626-SM-793D8 20-29 years, male 2798.9
GTEX-11VI4-1626-SM-5EQKO 40-49 years, female 2758.8
GTEX-1GL5R-2026-SM-7MKHP 50-59 years, male 2647.7
GTEX-WRHK-1026-SM-4MVOD 20-29 years, female 2628.3
GTEX-1PDJ9-1826-SM-E9U66 20-29 years, male 2595.9
GTEX-16A39-1426-SM-6LLI6 30-39 years, female 2537.2
GTEX-VUSG-1726-SM-4KKZL 50-59 years, male 2513.7
GTEX-1OJC3-1626-SM-E9U65 20-29 years, male 2475.0
GTEX-1399U-2126-SM-5IFEZ 50-59 years, female 2413.5
GTEX-1RAZA-1826-SM-DTXA2 20-29 years, male 2389.8
GTEX-1JMQK-2426-SM-CXZJU 60-69 years, male 2375.3
GTEX-1QPFJ-2626-SM-DPRZU 30-39 years, female 2367.2
GTEX-1IKOE-1926-SM-ARU7V 30-39 years, female 2315.2
GTEX-1H11D-2526-SM-9JGGU 40-49 years, male 2308.5
GTEX-1LGOU-1426-SM-D3L8N 20-29 years, female 2260.1
GTEX-WH7G-1626-SM-4LVMY 40-49 years, male 2256.2
GTEX-1F75I-2526-SM-9WPOZ 40-49 years, male 2252.2
GTEX-18QFQ-1626-SM-72D7H 30-39 years, male 2252.1
GTEX-1RAZR-1826-SM-E6CRE 40-49 years, male 2239.6
GTEX-16NGA-1126-SM-7KFSY 40-49 years, female 2223.6
GTEX-17MFQ-1026-SM-7KFSZ 20-29 years, male 2212.1
GTEX-1CB4F-1826-SM-7MGXI 60-69 years, male 2210.3
GTEX-13O61-1326-SM-5KM31 60-69 years, male 2186.9
GTEX-13FH7-1226-SM-5IJFK 50-59 years, female 2180.2
GTEX-11P82-0826-SM-5P9GU 20-29 years, male 2171.8
GTEX-13W3W-2026-SM-5K7UL 60-69 years, female 2161.1
GTEX-1LBAC-1526-SM-CXZKU 20-29 years, male 2155.4
GTEX-ZF29-1626-SM-4WKFJ 60-69 years, female 2058.3
GTEX-X15G-1426-SM-4PQZK 50-59 years, female 2052.4
GTEX-14XAO-1926-SM-6ETZO 60-69 years, female 2038.4
GTEX-1LH75-1926-SM-DIPGD 50-59 years, female 2026.7
GTEX-ZC5H-2326-SM-4WAYT 40-49 years, female 2017.5
GTEX-12BJ1-1926-SM-5HL9Z 60-69 years, male 2012.3
GTEX-ZLFU-1526-SM-4WWBT 40-49 years, male 2004.9
GTEX-1BAJH-2526-SM-7IGOT 70-79 years, male 1998.3
GTEX-1S5ZA-1326-SM-EV7BB 20-29 years, male 1982.2
GTEX-1L5NE-1826-SM-EV79T 50-59 years, male 1981.8
GTEX-1HSMQ-2226-SM-C1YRD 50-59 years, male 1970.1
GTEX-1R9JW-1926-SM-EVR4J 30-39 years, female 1958.9
GTEX-14PKU-1626-SM-6871C 40-49 years, female 1948.7
GTEX-1H1DE-1426-SM-9JGHV 20-29 years, male 1948.7
GTEX-WFJO-0926-SM-4LVM2 30-39 years, male 1943.8
GTEX-11XUK-1426-SM-5EQMG 40-49 years, female 1939.7
GTEX-1K9T9-2726-SM-D4P3E 50-59 years, female 1934.8
GTEX-1C475-1426-SM-793CH 40-49 years, female 1917.1
GTEX-1B8KZ-1126-SM-7IGLX 50-59 years, male 1903.4
GTEX-15DZA-0826-SM-6AJBF 30-39 years, female 1888.8
GTEX-Y3IK-1726-SM-4YCCR 50-59 years, female 1876.7
GTEX-WEY5-1526-SM-4LMJF 40-49 years, female 1876.5
GTEX-1R7EV-1226-SM-DTX82 40-49 years, male 1871.6
GTEX-15EU6-1826-SM-7PC1W 50-59 years, male 1867.3
GTEX-Y5V5-1826-SM-4VDS5 60-69 years, female 1864.0
GTEX-13QBU-1926-SM-5IJEW 40-49 years, female 1849.2
GTEX-11NSD-1726-SM-5N9C3 20-29 years, male 1846.9
GTEX-14BMU-1426-SM-5TDE5 20-29 years, female 1843.4
GTEX-13NYB-1826-SM-5J1N3 40-49 years, male 1840.3
GTEX-145ME-0926-SM-5O9AR 40-49 years, female 1839.2
GTEX-Y3I4-1326-SM-4TT8Z 50-59 years, male 1812.3
GTEX-139T6-1026-SM-5IJGC 50-59 years, male 1799.4
GTEX-UPK5-2026-SM-4JBIM 40-49 years, male 1799.1
GTEX-1GMR2-1026-SM-7MKHJ 50-59 years, male 1789.5
GTEX-1QW4Y-1226-SM-EWRMY 30-39 years, male 1782.2
GTEX-1S82Z-1826-SM-E9TIK 30-39 years, female 1781.3
GTEX-14E6E-1626-SM-5RQI7 30-39 years, male 1775.9
GTEX-1KXAM-2026-SM-DHXKI 60-69 years, male 1761.1
GTEX-1OKEX-1126-SM-DTXEB 60-69 years, male 1757.9
GTEX-Y5LM-1626-SM-4VDTB 40-49 years, female 1757.0
GTEX-ZAB5-1526-SM-5HL9P 50-59 years, male 1735.4
GTEX-VJYA-0926-SM-4KL1N 60-69 years, male 1734.6
GTEX-1192X-2526-SM-59868 50-59 years, male 1733.7
GTEX-1AX8Z-2526-SM-731E3 60-69 years, male 1705.7
GTEX-ZA64-1226-SM-5HL7B 20-29 years, male 1702.5
GTEX-1R9PM-1626-SM-DPRY9 20-29 years, male 1701.8
GTEX-13RTK-0826-SM-5Q5C6 20-29 years, male 1700.2
GTEX-117YX-0326-SM-5GICL 50-59 years, male 1673.5
GTEX-ZVP2-1726-SM-5GU5P 50-59 years, male 1667.9
GTEX-131XG-1726-SM-5LZUR 50-59 years, female 1666.0
GTEX-14C39-1826-SM-5ZZW4 40-49 years, male 1622.4
GTEX-ZG7Y-1926-SM-DNZZ5 50-59 years, male 1606.9
GTEX-13OVI-1926-SM-5IJCG 60-69 years, female 1595.1
GTEX-1I1GT-1826-SM-ARZLW 60-69 years, female 1590.0
GTEX-1497J-1926-SM-5TDCC 60-69 years, male 1588.0
GTEX-1J8QM-1026-SM-C1YQA 60-69 years, female 1583.3
GTEX-1QP2A-2426-SM-EXOJA 50-59 years, male 1581.6
GTEX-12WSK-1526-SM-5CVNO 40-49 years, female 1580.5
GTEX-1CAMR-0826-SM-7MKFK 20-29 years, male 1578.8
GTEX-1MUQO-2426-SM-EAZ5A 60-69 years, male 1569.3
GTEX-18A66-2526-SM-7KFTZ 60-69 years, male 1564.3
GTEX-ZEX8-1826-SM-57WBH 50-59 years, male 1558.3
GTEX-139YR-2226-SM-5IFFW 50-59 years, male 1548.3
GTEX-Z9EW-0926-SM-5CVMM 40-49 years, male 1542.3
GTEX-1JN76-1126-SM-C1YRL 20-29 years, female 1540.3
GTEX-17KNJ-1626-SM-718AL 50-59 years, male 1536.5
GTEX-YEC4-1726-SM-4W21E 40-49 years, male 1532.8
GTEX-XPVG-1726-SM-4B65W 50-59 years, male 1531.8
GTEX-ZQUD-0926-SM-57WE3 30-39 years, male 1526.5
GTEX-Y111-2226-SM-4SOJB 50-59 years, male 1491.3
GTEX-13X6H-1826-SM-7EWCZ 50-59 years, female 1489.8
GTEX-ZLWG-1626-SM-DNZZ1 50-59 years, female 1486.8
GTEX-X5EB-1626-SM-4E3IV 40-49 years, male 1478.7
GTEX-11DXZ-1326-SM-5H11X 50-59 years, male 1474.8
GTEX-1QCLZ-2126-SM-EWRNC 60-69 years, female 1462.3
GTEX-13113-1226-SM-5EGHT 60-69 years, female 1461.2
GTEX-131XE-0926-SM-5HL7J 50-59 years, male 1457.8
GTEX-ZTPG-2626-SM-57WFX 20-29 years, female 1441.2
GTEX-XMK1-1826-SM-4B66F 40-49 years, male 1440.7
GTEX-ZF2S-1726-SM-57WFT 50-59 years, female 1437.6
GTEX-ZP4G-1626-SM-57WGD 20-29 years, female 1433.4
GTEX-ZXES-1526-SM-5NQ95 30-39 years, female 1429.5
GTEX-1R9K5-2026-SM-E6CPS 50-59 years, male 1421.8
GTEX-1399S-2026-SM-5KM4B 30-39 years, female 1419.8
GTEX-ZPIC-2326-SM-57WDW 40-49 years, female 1416.6
GTEX-1399R-2026-SM-5K7WN 30-39 years, male 1409.4
GTEX-13111-1426-SM-5DUW3 50-59 years, male 1406.8
GTEX-17HHE-1726-SM-79OKT 50-59 years, male 1406.3
GTEX-Y114-1426-SM-4TT6W 50-59 years, female 1401.7
GTEX-ZQG8-2526-SM-57WEQ 60-69 years, female 1395.4
GTEX-WYJK-1526-SM-4ONCW 50-59 years, male 1391.5
GTEX-XGQ4-1326-SM-4GIDU 50-59 years, male 1384.6
GTEX-11I78-1126-SM-5A5K5 50-59 years, female 1379.9
GTEX-1C64O-2526-SM-79ONO 60-69 years, male 1374.4
GTEX-ZZ64-0526-SM-5GZXM 20-29 years, male 1374.2
GTEX-11DXX-1626-SM-5H11H 60-69 years, female 1363.6
GTEX-131XF-1326-SM-5GCMQ 60-69 years, male 1358.0
GTEX-14PKV-2026-SM-6AJ9A 20-29 years, female 1352.1
GTEX-WFG7-1726-SM-4LVME 20-29 years, male 1351.5
GTEX-WFG8-1626-SM-4LVMB 20-29 years, male 1329.0
GTEX-1B8KE-1726-SM-7IGMN 50-59 years, male 1311.3
GTEX-WFON-1526-SM-4LVMP 40-49 years, male 1306.3
GTEX-11P7K-1626-SM-5GU63 30-39 years, male 1305.6
GTEX-15G1A-1726-SM-6LPI4 30-39 years, male 1298.7
GTEX-16MTA-1526-SM-6LPJB 50-59 years, male 1287.4
GTEX-14PJ3-1326-SM-664O7 50-59 years, male 1281.3
GTEX-16AAH-1426-SM-7KFTR 50-59 years, male 1279.1
GTEX-1R7EU-1326-SM-E6CQ6 60-69 years, male 1273.2
GTEX-14DAR-1426-SM-5RQIR 50-59 years, male 1268.2
GTEX-ZVT2-2126-SM-5NQ93 50-59 years, female 1265.4
GTEX-13O21-1026-SM-5IJDU 50-59 years, male 1261.0
GTEX-111CU-1326-SM-5NQ8L 50-59 years, male 1260.5
GTEX-XBED-1426-SM-4AT4G 60-69 years, male 1259.3
GTEX-13CF3-1226-SM-5LZXN 60-69 years, female 1254.5
GTEX-1JK1U-1226-SM-CNNPN 60-69 years, male 1251.0
GTEX-145LT-1026-SM-5LU9O 40-49 years, male 1248.4
GTEX-11LCK-1926-SM-5A5KE 30-39 years, male 1227.9
GTEX-11EQ9-1326-SM-5985X 30-39 years, male 1210.2
GTEX-14PJN-0826-SM-686ZL 30-39 years, male 1210.2
GTEX-ZYFG-2026-SM-5E43Y 60-69 years, female 1200.2
GTEX-XUZC-1426-SM-4BRV3 30-39 years, female 1190.4
GTEX-144GM-1026-SM-79OKU 20-29 years, male 1173.8
GTEX-13D11-0726-SM-5LZZB 50-59 years, female 1167.9
GTEX-WHSB-1026-SM-4M1XN 50-59 years, male 1144.2
GTEX-YB5E-1526-SM-5IFIE 40-49 years, male 1136.1
GTEX-Y9LG-1626-SM-5IFHM 30-39 years, male 1126.6
GTEX-14PN3-2026-SM-68729 60-69 years, female 1111.0
GTEX-XXEK-1026-SM-4BRUW 50-59 years, male 1103.1
GTEX-133LE-1426-SM-5IFH1 20-29 years, female 1102.2
GTEX-13FTW-2026-SM-5IJE2 40-49 years, male 1097.0
GTEX-13PL7-2626-SM-5IFH4 60-69 years, female 1094.0
GTEX-1AMFI-1926-SM-731F2 50-59 years, female 1090.8
GTEX-1CAMS-2426-SM-7DHMV 40-49 years, female 1088.3
GTEX-ZTX8-0526-SM-59HLD 20-29 years, male 1085.3
GTEX-WY7C-1826-SM-4ONCE 50-59 years, male 1055.3
GTEX-XAJ8-0526-SM-47JYK 40-49 years, male 1040.8
GTEX-ZLV1-1126-SM-4WWBW 60-69 years, female 1024.1
GTEX-1122O-1326-SM-5H11F 60-69 years, female 1015.7
GTEX-14PJ6-1726-SM-6AJBN 60-69 years, female 995.6
GTEX-ZPCL-1726-SM-57WEO 60-69 years, female 976.2
GTEX-YF7O-1826-SM-5IFIU 50-59 years, male 962.7
GTEX-YFCO-1326-SM-664NV 40-49 years, male 950.4
GTEX-ZVZP-1826-SM-5GZXB 50-59 years, male 936.2
GTEX-WQUQ-2426-SM-4MVNW 60-69 years, male 927.5
GTEX-ZDTT-1726-SM-5HL69 60-69 years, male 907.4
GTEX-111YS-1426-SM-5GID8 60-69 years, male 888.3
GTEX-1J8Q3-2526-SM-CNNQ4 60-69 years, male 883.2
GTEX-ZTSS-0926-SM-59865 40-49 years, male 869.9
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SMALL INTESTINE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

638.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Small intestine
Scaled Tags Per Million: 638.4
FF:10024-101D6 15,40,85 years, mixed 638.4

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