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EEF1A1
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  • SUMMARY

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  • STRUCT & INT

  • EEF1A1
CANCER LUNG CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
LUAD TCGA LUAD VALIDATION LUSC TCGA LUSC VALIDATION PROTEIN LUAD CPTAC PROTEIN LUSC CPTAC PROTEIN EXPRESSION
ANTIBODIES
AND
VALIDATION
Dictionary
Lung cancer
Human cancer
Lung adenocarcinoma
Lung squamous cell carcinoma
LUNG ADENOCARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

EEF1A1 is not prognostic in Lung Adenocarcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 7273.07
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 5925.8
Number of samples 497
Samples
Sample Description pTPM
TCGA-64-5775-01A 71 years, male, white, stage:Stage IIIA, dead, 62 days 17246.1
TCGA-91-8496-01A 63 years, female, white, stage:Stage IB, alive, 505 days 16269.0
TCGA-64-1680-01A 63 years, male, white, stage:Stage IV, alive, 1126 days 16164.4
TCGA-05-5428-01A 57 years, male, stage:Stage IIA, alive, 670 days 15362.9
TCGA-55-6986-01A 74 years, female, white, stage:Stage IB, alive, 3261 days 14621.6
TCGA-67-3770-01A 70 years, female, white, stage:Stage IA, alive, 610 days 13794.4
TCGA-05-4426-01A 71 years, male, stage:Stage IB, alive, 791 days 13785.3
TCGA-75-6212-01A female, stage:Stage IIB, dead, 1516 days 12932.2
TCGA-49-4506-01A 68 years, female, white, stage:Stage IIB, dead, 999 days 12924.9
TCGA-05-4249-01A 67 years, male, stage:Stage IB, alive, 1523 days 12900.9
TCGA-44-3398-01A 77 years, female, white, stage:Stage IA, alive, 1163 days 12705.0
TCGA-44-2661-01A 69 years, female, white, stage:Stage IA, alive, 1159 days 12702.9
TCGA-67-3773-01A 84 years, female, white, stage:Stage IB, alive, 427 days 12132.8
TCGA-44-5645-01A 61 years, female, black or african american, stage:Stage IA, alive, 852 days 12107.5
TCGA-49-4486-01A 72 years, male, white, stage:Stage IA, dead, 2318 days 12042.0
TCGA-35-4122-01A 69 years, male, white, stage:Stage IA, alive, 225 days 11598.5
TCGA-49-4510-01A 51 years, female, black or african american, stage:Stage IIB, dead, 896 days 11498.9
TCGA-38-4625-01A 66 years, female, white, stage:Stage IB, alive, 2973 days 11348.4
TCGA-44-7667-01A 49 years, female, white, stage:Stage IIB, alive, 1097 days 11091.5
TCGA-05-5425-01A 68 years, male, stage:Stage IIB, alive, 882 days 10907.0
TCGA-97-A4M1-01A 52 years, female, white, stage:Stage IA, alive, 601 days 10543.3
TCGA-55-8097-01A 60 years, female, white, stage:Stage IA, alive, 476 days 10492.2
TCGA-50-5068-01A 59 years, female, white, stage:Stage IIB, dead, 1499 days 10340.7
TCGA-97-A4M0-01A 60 years, female, white, stage:Stage IB, alive, 652 days 10332.2
TCGA-67-3772-01A 82 years, female, white, stage:Stage IB, alive, 573 days 10242.9
TCGA-78-8655-01A 77 years, female, stage:Stage IA, alive, 2360 days 10211.6
TCGA-64-5815-01A 74 years, male, white, stage:Stage IIB, alive, 866 days 10168.1
TCGA-50-6591-01A 63 years, female, white, stage:Stage IV, dead, 119 days 10108.3
TCGA-91-7771-01A 62 years, male, white, stage:Stage IIB, alive, 492 days 10067.3
TCGA-97-7546-01A 76 years, female, white, stage:Stage IA, alive, 1285 days 9787.0
TCGA-78-7539-01A 75 years, female, white, stage:Stage IIA, alive, 791 days 9785.3
TCGA-55-6972-01A 72 years, male, white, stage:Stage IB, dead, 1632 days 9752.9
TCGA-35-3615-01A 57 years, male, white, stage:Stage IB, alive, 14 days 9737.5
TCGA-50-8460-01A 74 years, male, white, stage:Stage IA, alive, 829 days 9702.4
TCGA-35-5375-01A 61 years, male, white, stage:Stage IIIA, alive, 264 days 9699.2
TCGA-55-8087-01A 59 years, female, white, stage:Stage IB, alive, 462 days 9634.3
TCGA-64-1678-01A 70 years, female, white, stage:'--, alive, 1189 days 9546.5
TCGA-67-6215-01A 52 years, female, white, stage:Stage IB, alive, 174 days 9544.8
TCGA-38-4627-01A 64 years, female, white, stage:Stage IIA, dead, 1147 days 9499.8
TCGA-49-4501-01A 67 years, female, white, stage:Stage IB, dead, 1421 days 9458.9
TCGA-NJ-A7XG-01A 49 years, male, black or african american, stage:Stage IIIA, alive, 617 days 9450.9
TCGA-05-5423-01A 65 years, male, stage:Stage IIB, alive, 151 days 9383.0
TCGA-95-7948-01A 42 years, female, white, stage:Stage IB, alive, 476 days 9308.1
TCGA-86-8076-01A 42 years, male, white, stage:Stage IA, alive, 993 days 9260.1
TCGA-50-6673-01A 84 years, female, white, stage:Stage I, dead, 22 days 9257.5
TCGA-95-8039-01A 72 years, male, white, stage:Stage IA, alive, 830 days 9179.3
TCGA-44-A47A-01A 78 years, female, white, stage:Stage IB, alive, 466 days 9176.0
TCGA-69-7763-01A 69 years, male, white, stage:Stage IA, alive, 690 days 9131.2
TCGA-50-5055-01A 79 years, female, white, stage:Stage IIA, dead, 1830 days 9104.6
TCGA-62-A46Y-01A 70 years, female, white, stage:Stage IIIA, dead, 414 days 9091.7
TCGA-50-5931-01A 75 years, female, white, stage:Stage IB, dead, 434 days 9072.5
TCGA-73-4670-01A 69 years, female, white, stage:Stage IV, alive, 131 days 9047.8
TCGA-75-5146-01A male, stage:Stage IB, alive, 2368 days 9045.4
TCGA-86-8668-01A 61 years, female, white, stage:Stage IA, alive, 423 days 9034.5
TCGA-64-1677-01A 77 years, female, white, stage:Stage IIIA, dead, 628 days 8919.5
TCGA-50-5066-01A 72 years, male, black or african american, stage:Stage IB, alive, 1442 days 8873.2
TCGA-55-7816-01A 49 years, female, white, stage:Stage IV, dead, 468 days 8820.7
TCGA-55-7725-01A 68 years, female, white, stage:Stage IA, alive, 442 days 8782.1
TCGA-35-4123-01A 38 years, male, white, stage:Stage IA, alive, 182 days 8771.2
TCGA-05-4403-01A 76 years, male, stage:Stage IB, alive, 578 days 8742.7
TCGA-NJ-A4YG-01A 65 years, male, white, stage:Stage IB, alive, 2261 days 8663.5
TCGA-05-4415-01A 57 years, male, stage:Stage IIIB, dead, 91 days 8656.6
TCGA-44-5643-01A 53 years, male, black or african american, stage:Stage IIIA, alive, 1013 days 8632.2
TCGA-97-8171-01A 81 years, male, asian, stage:Stage IV, alive, 568 days 8572.9
TCGA-97-7941-01A 72 years, female, white, stage:Stage IA, alive, 484 days 8544.9
TCGA-62-8397-01A 70 years, female, white, stage:Stage IIB, alive, 1289 days 8465.2
TCGA-97-A4M7-01A 74 years, male, white, stage:Stage IA, alive, 629 days 8434.4
TCGA-67-6216-01A 57 years, female, white, stage:Stage IA, alive, 141 days 8318.1
TCGA-38-4628-01A 65 years, female, white, stage:Stage IIB, dead, 1492 days 8283.1
TCGA-78-7167-01A 77 years, male, white, stage:Stage IV, dead, 2681 days 8258.4
TCGA-38-4630-01A 75 years, female, white, stage:Stage IB, dead, 1073 days 8245.8
TCGA-95-7039-01A 54 years, female, white, stage:Stage IIB, alive, 1272 days 8153.4
TCGA-64-1676-01A 58 years, male, white, stage:Stage IA, alive, 1728 days 8114.4
TCGA-78-7147-01A 67 years, female, white, stage:Stage IIB, dead, 586 days 8108.5
TCGA-50-8457-01A 63 years, female, black or african american, stage:Stage IA, alive, 1125 days 8099.1
TCGA-73-4662-01A 65 years, female, white, stage:Stage IA, alive, 2515 days 8087.5
TCGA-55-7576-01A 54 years, male, black or african american, stage:Stage IB, alive, 670 days 8062.7
TCGA-44-3919-01A 71 years, female, white, stage:Stage IA, dead, 1026 days 8027.7
TCGA-73-4659-01A 66 years, male, white, stage:Stage IIIA, dead, 711 days 7966.0
TCGA-67-3774-01A 73 years, female, white, stage:Stage IB, alive, 385 days 7918.9
TCGA-73-4677-01A 74 years, male, white, stage:'--, dead, 38 days 7903.7
TCGA-55-8090-01A 80 years, male, white, stage:Stage IA, dead, 598 days 7894.8
TCGA-86-A4P8-01A 59 years, female, white, stage:Stage IIIA, alive, 805 days 7894.7
TCGA-71-6725-01A 48 years, female, asian, stage:Stage IB, alive, 256 days 7887.3
TCGA-44-6148-01A 60 years, male, white, stage:Stage IA, alive, 704 days 7847.1
TCGA-78-7154-01A 72 years, male, white, stage:Stage IIIA, dead, 593 days 7753.8
TCGA-86-8056-01A 63 years, female, white, stage:Stage IIIA, alive, 139 days 7728.6
TCGA-91-8499-01A 76 years, female, white, stage:Stage IA, alive, 36 days 7714.6
TCGA-44-4112-01A 60 years, female, white, stage:Stage IB, dead, 808 days 7701.0
TCGA-91-6847-01A 62 years, female, white, stage:Stage IB, alive, 842 days 7685.2
TCGA-44-3917-01A 33 years, female, white, stage:Stage IB, alive, 1183 days 7677.2
TCGA-49-6767-01A 46 years, female, white, stage:Stage IIB, alive, 677 days 7634.0
TCGA-97-A4M6-01A 45 years, female, white, stage:Stage IA, alive, 568 days 7573.6
TCGA-50-5045-01A 57 years, female, black or african american, stage:'--, dead, 2174 days 7559.6
TCGA-93-7347-01A 76 years, female, white, stage:Stage IA, alive, 683 days 7555.6
TCGA-44-2655-01A 65 years, female, white, stage:Stage IA, alive, 1324 days 7553.5
TCGA-75-6206-01A male, stage:Stage IB, alive, 2590 days 7548.2
TCGA-MN-A4N5-01A 63 years, male, white, stage:Stage IA, alive, 84 days 7540.0
TCGA-78-7161-01A 69 years, female, white, stage:Stage IIB, dead, 291 days 7487.3
TCGA-44-2665-01A 55 years, female, white, stage:Stage IIB, alive, 1301 days 7487.0
TCGA-55-7281-01A 70 years, female, white, stage:Stage IA, alive, 872 days 7452.1
TCGA-86-8669-01A 64 years, male, white, stage:Stage IA, alive, 938 days 7442.4
TCGA-NJ-A55O-01A 56 years, female, white, stage:Stage IIA, alive, 13 days 7419.2
TCGA-99-7458-01A 74 years, female, white, stage:Stage IIIA, alive, 747 days 7416.3
TCGA-44-3918-01A 60 years, female, white, stage:Stage IA, alive, 1036 days 7401.9
TCGA-55-7573-01A 72 years, female, white, stage:Stage IA, alive, 487 days 7395.5
TCGA-55-8207-01A 73 years, male, white, stage:Stage IB, alive, 977 days 7353.1
TCGA-44-8117-01A 54 years, female, white, stage:Stage IB, alive, 385 days 7339.1
TCGA-55-8206-01A 56 years, male, white, stage:Stage IA, alive, 888 days 7313.4
TCGA-97-A4M3-01A 69 years, female, white, stage:Stage IA, alive, 540 days 7287.1
TCGA-78-7158-01A 59 years, female, white, stage:Stage IIIB, dead, 179 days 7259.1
TCGA-J2-8194-01A 69 years, female, white, stage:Stage IIB, alive, 724 days 7250.8
TCGA-MP-A4T7-01A 75 years, female, stage:Stage IV, dead, 167 days 7244.3
TCGA-05-4384-01A 66 years, male, stage:Stage IIIA, alive, 426 days 7201.1
TCGA-78-7148-01A 71 years, male, white, stage:Stage IIB, dead, 626 days 7146.1
TCGA-38-4632-01A 42 years, male, black or african american, stage:Stage IV, dead, 1357 days 7141.5
TCGA-49-AARN-01A 56 years, female, black or african american, stage:Stage IA, dead, 1135 days 7139.1
TCGA-05-4427-01A 65 years, female, stage:Stage IIB, alive, 791 days 7126.6
TCGA-91-8497-01A 75 years, female, white, stage:Stage IA, dead, 434 days 7113.2
TCGA-97-A4M5-01A 83 years, male, white, stage:Stage IA, alive, 634 days 7106.9
TCGA-50-5942-01A 67 years, female, white, stage:Stage IA, alive, 1847 days 7084.9
TCGA-55-8299-01A 61 years, female, white, stage:Stage IA, dead, 469 days 7076.9
TCGA-73-4676-01A 45 years, male, white, stage:Stage IIA, dead, 281 days 7059.2
TCGA-38-7271-01A 72 years, female, white, stage:Stage IA, dead, 800 days 7055.1
TCGA-49-6745-01A 82 years, male, white, stage:Stage IIIA, alive, 522 days 7036.0
TCGA-J2-A4AE-01A 77 years, female, white, stage:Stage IA, alive, 1079 days 7015.6
TCGA-55-8513-01A 77 years, female, white, stage:Stage IIB, alive, 791 days 7014.8
TCGA-55-7903-01A 64 years, male, white, stage:Stage IA, alive, 567 days 6983.3
TCGA-69-8453-01A 77 years, male, white, stage:Stage IIB, alive, 813 days 6975.3
TCGA-55-7727-01A 70 years, male, white, stage:Stage IIIA, alive, 119 days 6964.9
TCGA-78-8662-01A 53 years, female, stage:Stage IB, dead, 3361 days 6949.2
TCGA-97-8174-01A 67 years, male, white, stage:Stage IIA, dead, 164 days 6927.4
TCGA-05-4418-01A 69 years, male, stage:Stage IIIA, dead, 274 days 6900.7
TCGA-MP-A4T8-01A 68 years, male, stage:Stage IIIA, dead, 161 days 6833.4
TCGA-50-6595-01A 74 years, female, white, stage:Stage IIIA, dead, 189 days 6816.0
TCGA-50-5932-01A 75 years, male, white, stage:Stage IIB, dead, 1235 days 6815.7
TCGA-55-7283-01A 76 years, female, white, stage:Stage IIIA, alive, 609 days 6800.3
TCGA-50-5936-01A 58 years, male, white, stage:Stage IIIA, dead, 257 days 6778.0
TCGA-49-4505-01A 61 years, female, white, stage:Stage IIB, dead, 428 days 6773.9
TCGA-05-4434-01A 67 years, female, stage:Stage IV, dead, 457 days 6770.4
TCGA-78-7152-01A 65 years, male, white, stage:Stage IB, dead, 1215 days 6727.3
TCGA-05-4398-01A 47 years, female, stage:Stage IIIB, alive, 1431 days 6723.5
TCGA-38-4629-01A 68 years, male, white, stage:Stage IIB, dead, 864 days 6668.0
TCGA-86-8054-01A 61 years, male, white, stage:Stage IIB, alive, 1148 days 6665.9
TCGA-73-4658-01A 80 years, female, white, stage:Stage IB, dead, 1600 days 6648.0
TCGA-55-6983-01A 81 years, male, white, stage:Stage IIB, alive, 2823 days 6642.1
TCGA-69-7764-01A 75 years, male, white, stage:Stage IA, alive, 414 days 6641.1
TCGA-91-6835-01A 81 years, female, white, stage:Stage IA, alive, 79 days 6628.9
TCGA-49-4490-01A 45 years, female, white, stage:Stage IIIA, dead, 385 days 6624.5
TCGA-05-4430-01A 59 years, female, stage:Stage IB, alive, 761 days 6599.6
TCGA-78-7160-01A 61 years, male, white, stage:Stage IV, dead, 697 days 6575.0
TCGA-55-7910-01A 50 years, female, black or african american, stage:Stage IIA, alive, 1040 days 6561.8
TCGA-55-7994-01A 81 years, male, white, stage:Stage IIB, alive, 603 days 6544.5
TCGA-49-6744-01A 64 years, female, white, stage:Stage IIA, alive, 1683 days 6534.4
TCGA-55-6970-01A 67 years, female, white, stage:Stage IIIA, dead, 464 days 6519.4
TCGA-05-4389-01A 70 years, male, stage:Stage IA, alive, 1369 days 6515.7
TCGA-50-5935-01A 86 years, female, white, stage:Stage IA, dead, 653 days 6514.9
TCGA-91-6830-01A 65 years, female, white, stage:Stage IIA, alive, 60 days 6508.1
TCGA-78-7536-01A 69 years, male, white, stage:Stage IIIA, dead, 244 days 6505.3
TCGA-97-8552-01A 55 years, female, white, stage:Stage I, alive, 626 days 6499.6
TCGA-97-8175-01A 55 years, female, white, stage:Stage IB, alive, 551 days 6478.7
TCGA-78-7156-01A 62 years, male, white, stage:Stage IV, dead, 976 days 6450.9
TCGA-NJ-A55A-01A 76 years, female, white, stage:Stage IB, alive, 15 days 6406.3
TCGA-05-4250-01A 79 years, female, stage:Stage IIIA, dead, 121 days 6403.6
TCGA-78-7145-01A 52 years, female, white, stage:Stage IV, dead, 826 days 6396.2
TCGA-69-7973-01A 42 years, female, white, stage:Stage IB, alive, 230 days 6375.3
TCGA-50-5049-01A 70 years, male, white, stage:Stage IA, alive, 3094 days 6355.5
TCGA-MP-A4T9-01A 54 years, female, white, stage:Stage IIIA, dead, 1265 days 6352.5
TCGA-78-7143-01A 62 years, female, white, stage:Stage IB, dead, 4961 days 6340.5
TCGA-95-A4VK-01A 74 years, female, white, stage:Stage IIIA, alive, 651 days 6340.2
TCGA-78-8660-01A 69 years, male, stage:Stage IIB, dead, 321 days 6323.4
TCGA-64-5778-01A 60 years, male, white, stage:Stage IB, alive, 1305 days 6320.6
TCGA-73-7498-01A 58 years, female, white, stage:Stage IA, alive, 1189 days 6311.3
TCGA-05-5420-01A 67 years, male, stage:Stage IIIA, alive, 457 days 6307.9
TCGA-L4-A4E6-01A 67 years, male, white, stage:Stage IA, alive, 435 days 6298.6
TCGA-86-8278-01A 63 years, female, white, stage:Stage IIB, alive, 944 days 6291.9
TCGA-44-6146-01A 64 years, male, white, stage:Stage IIB, alive, 728 days 6288.9
TCGA-95-7562-01A 71 years, male, black or african american, stage:Stage IIA, dead, 87 days 6287.9
TCGA-55-8616-01A 58 years, female, white, stage:Stage IB, alive, 48 days 6267.5
TCGA-05-4417-01A 51 years, female, stage:Stage IB, alive, 455 days 6264.7
TCGA-95-7947-01A 67 years, male, white, stage:Stage IA, alive, 477 days 6259.7
TCGA-93-A4JQ-01A 49 years, male, white, stage:Stage IA, alive, 526 days 6252.6
TCGA-78-8640-01A 59 years, male, stage:Stage IIA, alive, 7062 days 6251.5
TCGA-55-7724-01A 76 years, female, white, stage:Stage IB, alive, 705 days 6242.0
TCGA-91-6829-01A 78 years, male, white, stage:Stage IB, dead, 1258 days 6225.3
TCGA-44-6777-01A 85 years, female, white, stage:Stage IB, dead, 987 days 6178.4
TCGA-55-8507-01A 53 years, male, white, stage:Stage IA, alive, 418 days 6154.9
TCGA-49-AAR9-01A 61 years, male, black or african american, stage:Stage IIB, dead, 260 days 6150.0
TCGA-55-7227-01A 77 years, male, white, stage:Stage IIIA, dead, 952 days 6149.8
TCGA-93-A4JO-01A 70 years, male, white, stage:Stage IA, dead, 33 days 6090.5
TCGA-44-A47B-01A 79 years, male, white, stage:Stage IB, alive, 287 days 6073.5
TCGA-05-4420-01A 41 years, male, stage:Stage IB, alive, 912 days 6072.8
TCGA-55-6712-01A 71 years, male, white, stage:Stage IIA, dead, 171 days 6058.8
TCGA-78-7162-01A 75 years, male, white, stage:Stage IA, dead, 3169 days 6054.2
TCGA-MP-A4TH-01A 70 years, female, white, stage:Stage IA, alive, 741 days 6048.8
TCGA-55-6980-01A 56 years, male, white, stage:Stage IA, alive, 2109 days 6034.7
TCGA-62-A472-01A 70 years, male, white, stage:Stage IIB, alive, 910 days 6020.4
TCGA-44-2662-01A 65 years, male, white, stage:Stage IB, alive, 1280 days 6013.2
TCGA-69-7765-01A 56 years, male, black or african american, stage:'--, alive, 165 days 6008.8
TCGA-38-4626-01A 57 years, female, white, stage:'--, alive, 3674 days 5978.4
TCGA-78-7146-01A 71 years, female, white, stage:Stage IIIA, dead, 173 days 5964.6
TCGA-05-4433-01A 82 years, male, stage:Stage IB, alive, 730 days 5951.3
TCGA-05-4422-01A 68 years, male, stage:Stage IB, alive, 365 days 5950.6
TCGA-55-7815-01A 76 years, male, stage:Stage IB, alive, 773 days 5949.7
TCGA-69-8255-01A 71 years, male, white, stage:Stage IA, alive, 129 days 5945.7
TCGA-55-7574-01A 64 years, female, white, stage:Stage IB, dead, 995 days 5945.3
TCGA-78-7537-01A 72 years, male, stage:Stage IB, dead, 1622 days 5929.3
TCGA-86-8279-01A 46 years, male, white, stage:Stage IIA, alive, 949 days 5915.3
TCGA-MP-A4TI-01A 72 years, male, white, stage:Stage IIA, dead, 429 days 5896.8
TCGA-73-4668-01A 66 years, female, american indian or alaska native, stage:Stage IIB, alive, 467 days 5889.3
TCGA-49-4494-01A 77 years, male, white, stage:Stage IIIA, dead, 1081 days 5888.1
TCGA-55-A492-01A 70 years, female, white, stage:Stage IA, alive, 596 days 5877.3
TCGA-05-5429-01A 60 years, male, stage:Stage IIIA, dead, 275 days 5851.7
TCGA-80-5611-01A male, stage:Stage IB, alive, 2595 days 5839.8
TCGA-55-8205-01A 76 years, female, white, stage:Stage IIA, alive, 599 days 5808.0
TCGA-05-5715-01A 69 years, female, stage:Stage IB, alive, 62 days 5806.2
TCGA-86-8671-01A 72 years, female, white, stage:Stage IIB, alive, 839 days 5786.8
TCGA-62-A46O-01A 65 years, female, white, stage:Stage IB, dead, 1454 days 5780.2
TCGA-NJ-A4YP-01A 52 years, male, white, stage:Stage IB, alive, 50 days 5761.2
TCGA-49-AARR-01A 68 years, male, black or african american, stage:Stage IA, alive, 4992 days 5746.2
TCGA-67-6217-01A 73 years, female, white, stage:Stage IIA, alive, 422 days 5743.1
TCGA-49-6761-01A 68 years, female, white, stage:Stage IIIA, alive, 354 days 5726.4
TCGA-86-7953-01A 69 years, female, white, stage:Stage IA, alive, 997 days 5706.5
TCGA-55-6978-01A 81 years, male, white, stage:Stage IIA, dead, 176 days 5705.6
TCGA-MP-A4TK-01A 56 years, female, stage:Stage IIB, dead, 582 days 5704.0
TCGA-62-8398-01A 55 years, male, white, stage:Stage IIIA, dead, 444 days 5692.6
TCGA-97-8172-01A 75 years, female, white, stage:Stage IB, alive, 545 days 5639.7
TCGA-L9-A50W-01A 75 years, male, black or african american, stage:Stage IIA, dead, 442 days 5624.6
TCGA-95-7944-01A 71 years, male, white, stage:Stage IA, alive, 377 days 5616.4
TCGA-86-7714-01A 61 years, female, black or african american, stage:Stage IIIA, dead, 625 days 5607.4
TCGA-53-7626-01A 76 years, female, white, stage:Stage IIA, dead, 929 days 5596.4
TCGA-97-7938-01A 76 years, female, white, stage:Stage IA, dead, 18 days 5574.0
TCGA-78-7163-01A 60 years, male, white, stage:Stage IB, alive, 7248 days 5567.9
TCGA-75-7025-01A male, stage:Stage IB, alive, 3305 days 5561.8
TCGA-44-6776-01A 60 years, female, white, stage:Stage IA, alive, 2616 days 5560.3
TCGA-50-5072-01A 74 years, male, white, stage:Stage IIIA, dead, 250 days 5552.8
TCGA-91-6836-01A 52 years, female, white, stage:Stage IB, alive, 417 days 5546.0
TCGA-J2-A4AG-01A 66 years, female, white, stage:Stage IA, alive, 988 days 5545.5
TCGA-86-8073-01A 58 years, male, white, stage:Stage IB, alive, 740 days 5537.0
TCGA-86-8280-01A 54 years, female, white, stage:Stage IIA, alive, 701 days 5531.5
TCGA-95-7567-01A 61 years, male, white, stage:Stage IIB, alive, 568 days 5508.7
TCGA-44-2668-01A 51 years, male, white, stage:Stage IB, dead, 761 days 5479.0
TCGA-49-6742-01A 70 years, male, white, stage:Stage IIA, dead, 488 days 5453.0
TCGA-91-A4BD-01A 78 years, male, white, stage:Stage IIA, alive, 603 days 5449.7
TCGA-64-1679-01A 58 years, female, white, stage:Stage IIIA, alive, 2488 days 5436.6
TCGA-99-8028-01A 50 years, female, black or african american, stage:Stage IA, alive, 1118 days 5422.8
TCGA-L9-A443-01A 63 years, female, white, stage:Stage IA, dead, 193 days 5411.0
TCGA-73-4675-01A 59 years, male, white, stage:Stage IIIA, dead, 922 days 5405.1
TCGA-97-A4LX-01A 81 years, male, white, stage:Stage IB, alive, 614 days 5392.4
TCGA-05-4425-01A 70 years, female, stage:Stage IV, alive, 669 days 5388.2
TCGA-55-8512-01A 41 years, male, white, stage:Stage IV, dead, 607 days 5376.5
TCGA-50-5944-01A 69 years, female, white, stage:Stage IA, alive, 1750 days 5364.2
TCGA-44-7662-01A 61 years, male, white, stage:Stage IB, alive, 218 days 5353.2
TCGA-50-6594-01A 79 years, female, black or african american, stage:Stage IIIA, dead, 370 days 5345.9
TCGA-97-7553-01A 58 years, female, white, stage:Stage IA, alive, 1870 days 5343.8
TCGA-73-4666-01A 52 years, female, white, stage:Stage IV, alive, 800 days 5333.5
TCGA-05-4432-01A 66 years, male, stage:Stage IIB, alive, 761 days 5315.1
TCGA-86-7954-01A 68 years, female, white, stage:Stage IB, alive, 605 days 5314.7
TCGA-50-5044-01A 72 years, female, white, stage:Stage IIIB, dead, 624 days 5307.2
TCGA-78-7159-01A 60 years, female, white, stage:Stage IA, alive, 1974 days 5294.1
TCGA-64-5781-01A 55 years, female, white, stage:Stage IB, alive, 1559 days 5278.6
TCGA-86-8672-01A 59 years, male, white, stage:Stage IIB, dead, 19 days 5277.5
TCGA-69-8253-01A 59 years, female, black or african american, stage:Stage IIA, alive, 426 days 5275.3
TCGA-55-A4DG-01A 71 years, male, white, stage:Stage IA, alive, 608 days 5262.1
TCGA-38-6178-01A 70 years, female, white, stage:Stage IIIA, alive, 448 days 5260.7
TCGA-MP-A4T6-01A 76 years, female, white, stage:Stage IIIA, dead, 1790 days 5259.3
TCGA-64-1681-01A 61 years, female, white, stage:Stage IA, dead, 1167 days 5256.5
TCGA-69-7760-01A 73 years, male, white, stage:Stage IIB, alive, 202 days 5238.6
TCGA-44-7661-01A 69 years, female, white, stage:Stage IB, dead, 557 days 5224.9
TCGA-44-8120-01A 58 years, male, black or african american, stage:Stage IB, alive, 260 days 5224.4
TCGA-55-A48X-01A 63 years, female, white, stage:Stage IIA, alive, 689 days 5224.1
TCGA-MP-A4TC-01A 77 years, male, white, stage:Stage IIIA, dead, 74 days 5196.1
TCGA-55-1594-01A 68 years, male, white, stage:Stage IIIA, alive, 1178 days 5194.2
TCGA-91-6828-01A 70 years, male, white, stage:Stage IA, alive, 323 days 5187.6
TCGA-62-A471-01A 64 years, male, white, stage:Stage IIB, alive, 1246 days 5183.0
TCGA-49-4487-01A 72 years, female, white, stage:Stage IA, dead, 855 days 5182.9
TCGA-75-5125-01A male, stage:Stage IIB, dead, 2027 days 5179.8
TCGA-44-6774-01A 56 years, female, white, stage:Stage IIIA, alive, 658 days 5175.5
TCGA-55-7726-01A 72 years, female, white, stage:Stage IA, alive, 652 days 5161.3
TCGA-J2-8192-01A 65 years, female, white, stage:Stage IIA, alive, 739 days 5141.2
TCGA-75-5147-01A female, stage:Stage IB, alive, 1333 days 5134.5
TCGA-69-7974-01A 54 years, female, white, stage:Stage IIIA, alive, 184 days 5129.9
TCGA-55-8514-01A 70 years, female, black or african american, stage:Stage IB, alive, 520 days 5107.6
TCGA-NJ-A4YI-01A 87 years, female, white, stage:Stage IIIA, dead, 4 days 5081.3
TCGA-55-6987-01A 77 years, male, white, stage:Stage IA, alive, 2137 days 5075.3
TCGA-55-6975-01A 61 years, male, white, stage:Stage IIB, dead, 118 days 5069.7
TCGA-99-8032-01A 61 years, male, white, stage:Stage IA, alive, 44 days 5058.8
TCGA-MP-A4TJ-01A 62 years, female, stage:Stage IA, dead, 339 days 5058.0
TCGA-69-7979-01A 71 years, female, white, stage:Stage IB, alive, 408 days 5051.7
TCGA-55-A57B-01A 80 years, female, black or african american, stage:Stage IA, alive, 546 days 5044.1
TCGA-38-A44F-01A 80 years, male, white, stage:Stage IB, alive, 133 days 5043.4
TCGA-99-8025-01A 72 years, female, black or african american, stage:Stage IIIA, alive, 1060 days 5032.9
TCGA-05-4402-01A 57 years, female, stage:Stage IV, dead, 244 days 5022.0
TCGA-97-A4M2-01A 66 years, male, white, stage:Stage IA, alive, 624 days 5004.2
TCGA-97-8176-01A 63 years, male, white, stage:Stage IIIA, dead, 468 days 5000.4
TCGA-MP-A4SY-01A 61 years, male, white, stage:Stage IIB, dead, 1501 days 4996.3
TCGA-49-4488-01A 74 years, female, white, stage:Stage IA, dead, 869 days 4977.3
TCGA-93-A4JP-01A 64 years, male, asian, stage:Stage IV, alive, 578 days 4973.8
TCGA-62-8399-01A 62 years, male, white, stage:Stage IIIA, alive, 2696 days 4973.3
TCGA-97-7552-01A 70 years, male, white, stage:Stage IB, alive, 1932 days 4968.4
TCGA-55-8614-01A 76 years, male, white, stage:Stage IB, alive, 536 days 4960.0
TCGA-95-8494-01A 67 years, male, white, stage:Stage IIA, alive, 84 days 4958.9
TCGA-78-7155-01A 68 years, male, white, stage:Stage IB, dead, 1171 days 4958.3
TCGA-78-7220-01A 53 years, female, white, stage:Stage IIIA, dead, 807 days 4943.6
TCGA-50-5933-01A 72 years, male, white, stage:Stage IIIB, dead, 2393 days 4942.4
TCGA-86-7701-01A 66 years, male, white, stage:Stage IV, alive, 947 days 4917.1
TCGA-99-8033-01A 74 years, female, white, stage:Stage IV, dead, 656 days 4914.3
TCGA-50-5930-01A 47 years, male, white, stage:Stage IIIA, dead, 282 days 4913.0
TCGA-62-A470-01A 84 years, male, white, stage:Stage IB, dead, 1194 days 4912.1
TCGA-44-7669-01A 59 years, male, black or african american, stage:Stage IIA, dead, 574 days 4907.5
TCGA-55-8301-01A 58 years, male, white, stage:Stage IB, alive, 534 days 4889.0
TCGA-50-8459-01A 68 years, male, white, stage:Stage IIB, alive, 1119 days 4860.4
TCGA-44-2657-01A 74 years, female, white, stage:Stage IB, alive, 1351 days 4854.3
TCGA-91-6848-01A 59 years, male, white, stage:Stage IIIA, alive, 224 days 4849.3
TCGA-44-6147-01A 67 years, female, white, stage:Stage IA, alive, 845 days 4842.3
TCGA-05-4405-01A 74 years, female, stage:Stage IB, alive, 610 days 4815.1
TCGA-97-8177-01A 59 years, female, white, stage:Stage IB, alive, 499 days 4788.0
TCGA-97-7547-01A 67 years, female, white, stage:Stage IB, alive, 1965 days 4783.4
TCGA-73-A9RS-01A 41 years, male, black or african american, stage:Stage IIB, dead, 340 days 4752.2
TCGA-64-5774-01A 60 years, male, white, stage:Stage IB, alive, 2676 days 4750.2
TCGA-55-8621-01A 75 years, female, white, stage:Stage IA, alive, 515 days 4736.3
TCGA-99-AA5R-01A 70 years, female, black or african american, stage:Stage IA, alive, 658 days 4734.3
TCGA-50-6592-01A 71 years, female, white, stage:Stage IB, dead, 777 days 4733.2
TCGA-44-6775-01A 72 years, female, white, stage:Stage IB, alive, 705 days 4729.2
TCGA-55-8615-01A 67 years, male, white, stage:Stage IIIA, alive, 446 days 4724.4
TCGA-55-8619-01A 72 years, female, white, stage:Stage IIB, alive, 416 days 4723.6
TCGA-62-A46V-01A 78 years, female, white, stage:Stage IB, alive, 2199 days 4717.6
TCGA-44-2666-01A 43 years, male, white, stage:Stage IB, dead, 97 days 4710.4
TCGA-78-7633-01A 67 years, male, white, stage:Stage IB, dead, 1528 days 4710.0
TCGA-50-5941-01A 55 years, female, white, stage:Stage IIIA, alive, 1474 days 4698.3
TCGA-L9-A8F4-01A 64 years, female, black or african american, stage:Stage IB, alive, 476 days 4657.1
TCGA-MP-A4SW-01A 53 years, male, white, stage:Stage IIB, dead, 1778 days 4654.7
TCGA-86-8673-01A 61 years, male, white, stage:Stage IB, alive, 862 days 4639.8
TCGA-44-6145-01A 62 years, female, white, stage:Stage IA, alive, 595 days 4625.8
TCGA-55-7907-01A 77 years, male, white, stage:Stage IIA, dead, 343 days 4613.5
TCGA-69-7978-01A 59 years, male, white, stage:Stage IIB, alive, 134 days 4608.3
TCGA-44-A47G-01A 73 years, female, white, stage:Stage IA, alive, 351 days 4585.7
TCGA-38-4631-01A 72 years, female, white, stage:Stage IB, dead, 354 days 4584.6
TCGA-44-2659-01A 65 years, female, white, stage:Stage IIB, alive, 1367 days 4583.3
TCGA-55-A48Z-01A 60 years, female, white, stage:Stage IIIB, alive, 651 days 4578.0
TCGA-93-A4JN-01A 71 years, male, white, stage:Stage IV, alive, 718 days 4551.2
TCGA-55-6979-01A 59 years, female, white, stage:Stage IIB, dead, 237 days 4544.8
TCGA-L9-A5IP-01A 40 years, female, black or african american, stage:Stage IV, dead, 58 days 4533.5
TCGA-86-A456-01A 78 years, female, asian, stage:Stage IA, alive, 896 days 4528.4
TCGA-05-4424-01A 70 years, male, stage:Stage IIB, alive, 913 days 4524.6
TCGA-53-7813-01A 51 years, female, white, stage:Stage IIIB, alive, 424 days 4503.5
TCGA-78-7166-01A 84 years, male, white, stage:Stage IIB, dead, 258 days 4502.8
TCGA-MP-A4SV-01A 67 years, male, stage:Stage IB, dead, 2620 days 4499.5
TCGA-44-8119-01A 73 years, male, white, stage:Stage IIB, alive, 285 days 4472.3
TCGA-62-A46R-01A 54 years, female, white, stage:Stage IB, dead, 1725 days 4466.4
TCGA-97-7937-01A 65 years, male, white, stage:Stage IB, alive, 564 days 4466.3
TCGA-69-7980-01A 70 years, female, white, stage:Stage I, alive, 411 days 4463.4
TCGA-55-8091-01A 74 years, male, white, stage:Stage IB, alive, 600 days 4440.8
TCGA-44-A4SS-01A 73 years, male, white, stage:Stage IA, alive, 415 days 4439.9
TCGA-44-2656-01A 59 years, male, white, stage:Stage IB, alive, 1429 days 4424.5
TCGA-86-8359-01A 52 years, male, white, stage:Stage IIIA, dead, 444 days 4419.0
TCGA-86-A4JF-01A 56 years, male, white, stage:Stage IIB, dead, 737 days 4407.6
TCGA-55-1596-01A 55 years, male, asian, stage:Stage IIB, alive, 2065 days 4401.9
TCGA-05-4396-01A 76 years, male, stage:Stage IIIB, dead, 303 days 4398.6
TCGA-50-5939-01A 85 years, male, white, stage:Stage IB, dead, 460 days 4392.6
TCGA-49-AAR3-01A 69 years, male, black or african american, stage:Stage IIB, alive, 1893 days 4361.9
TCGA-49-AAR0-01A 57 years, male, black or african american, stage:Stage IA, alive, 4765 days 4334.0
TCGA-67-3771-01A 77 years, female, black or african american, stage:Stage IA, alive, 610 days 4332.4
TCGA-55-6984-01A 71 years, female, white, stage:Stage IIB, dead, 760 days 4332.0
TCGA-55-A491-01A 81 years, female, white, stage:Stage IA, alive, 626 days 4325.8
TCGA-78-7149-01A 71 years, male, white, stage:Stage IIIB, alive, 3940 days 4325.3
TCGA-44-7659-01A 70 years, male, white, stage:Stage IA, alive, 691 days 4325.1
TCGA-49-AARO-01A 39 years, female, black or african american, stage:Stage IA, alive, 3759 days 4313.6
TCGA-86-6562-01A 52 years, male, white, stage:Stage IIA, dead, 376 days 4305.1
TCGA-55-7914-01A 71 years, female, white, stage:Stage IIA, dead, 187 days 4300.9
TCGA-44-7670-01A 47 years, female, white, stage:Stage IIA, alive, 882 days 4296.7
TCGA-95-A4VP-01A 66 years, female, white, stage:Stage IIIA, alive, 605 days 4277.5
TCGA-05-4382-01A 68 years, male, stage:Stage IB, alive, 607 days 4277.3
TCGA-44-7671-01A 64 years, male, black or african american, stage:Stage IB, alive, 889 days 4274.6
TCGA-50-6597-01A 79 years, female, white, stage:Stage IB, dead, 1268 days 4261.0
TCGA-62-A46P-01A 65 years, male, white, stage:Stage IB, dead, 594 days 4259.7
TCGA-86-A4P7-01A 63 years, female, white, stage:Stage IB, alive, 415 days 4259.2
TCGA-44-6779-01A 50 years, female, white, stage:Stage IIB, dead, 500 days 4252.9
TCGA-50-5051-01A 42 years, female, white, stage:Stage IIIA, dead, 478 days 4250.4
TCGA-05-4390-01A 58 years, female, stage:Stage IB, alive, 1126 days 4247.0
TCGA-55-6543-01A 60 years, female, white, stage:Stage IA, alive, 435 days 4231.1
TCGA-MP-A4TF-01A 58 years, female, white, stage:Stage IIA, dead, 336 days 4224.6
TCGA-44-6778-01A 59 years, male, black or african american, stage:Stage IA, alive, 1864 days 4211.9
TCGA-93-7348-01A 75 years, female, white, stage:Stage IA, alive, 531 days 4208.0
TCGA-78-8648-01A 58 years, female, stage:Stage IIB, dead, 1209 days 4207.2
TCGA-44-7660-01A 72 years, male, white, stage:Stage IB, alive, 592 days 4193.4
TCGA-62-8395-01A 80 years, female, white, stage:Stage IIB, alive, 1216 days 4178.7
TCGA-97-8547-01A 78 years, female, stage:Stage IIIA, alive, 657 days 4158.7
TCGA-62-8394-01A 65 years, female, white, stage:Stage IIIB, dead, 139 days 4133.4
TCGA-55-7995-01A 73 years, female, white, stage:Stage IA, alive, 889 days 4128.1
TCGA-78-7150-01A 59 years, male, white, stage:Stage IIB, dead, 666 days 4111.7
TCGA-55-8511-01A 73 years, female, white, stage:Stage IB, alive, 552 days 4093.9
TCGA-L9-A743-01A 56 years, male, black or african american, stage:Stage IIA, alive, 664 days 4076.2
TCGA-91-6840-01A 59 years, female, white, stage:Stage IA, alive, 372 days 4067.4
TCGA-55-8510-01A 55 years, female, white, stage:Stage IB, alive, 539 days 4049.3
TCGA-50-6593-01A 49 years, female, white, stage:Stage IIIA, dead, 336 days 4032.8
TCGA-83-5908-01A 59 years, female, white, stage:Stage IA, alive, 824 days 4029.9
TCGA-55-8505-01A 62 years, male, white, stage:Stage IIIA, alive, 440 days 4021.1
TCGA-75-6214-01A female, stage:Stage IIIA, dead, 1115 days 4016.4
TCGA-97-8179-01A 72 years, male, white, stage:Stage IA, alive, 435 days 4013.3
TCGA-55-8089-01A 56 years, male, white, stage:Stage IA, dead, 702 days 4012.6
TCGA-78-7542-01A 56 years, male, white, stage:Stage IB, dead, 321 days 4012.6
TCGA-86-7955-01A 62 years, male, white, stage:Stage IB, alive, 1072 days 4003.8
TCGA-55-7728-01A 64 years, female, white, stage:Stage IB, alive, 704 days 4001.3
TCGA-55-8302-01A 54 years, male, white, stage:Stage IB, alive, 478 days 3991.9
TCGA-MP-A5C7-01A 76 years, female, white, stage:Stage IB, alive, 2248 days 3983.6
TCGA-05-4397-01A 65 years, male, stage:Stage IIB, dead, 731 days 3981.6
TCGA-53-7624-01A 40 years, female, white, stage:Stage IV, dead, 1043 days 3963.5
TCGA-55-8085-01A 64 years, male, white, stage:Stage IA, alive, 904 days 3956.3
TCGA-86-8585-01A 57 years, male, white, stage:Stage IB, alive, 353 days 3956.2
TCGA-55-1592-01A 65 years, male, white, stage:Stage IA, dead, 701 days 3953.9
TCGA-55-A490-01A 78 years, male, white, stage:Stage IIA, dead, 99 days 3933.5
TCGA-55-6985-01A 58 years, female, white, stage:Stage IB, alive, 1233 days 3912.7
TCGA-55-8204-01A 87 years, female, white, stage:Stage IB, alive, 515 days 3902.3
TCGA-86-8055-01A 79 years, male, white, stage:Stage IIA, dead, 124 days 3900.6
TCGA-55-A48Y-01A 69 years, male, white, stage:Stage IIA, alive, 630 days 3897.0
TCGA-86-A4D0-01A 48 years, male, white, stage:Stage IIA, dead, 116 days 3863.3
TCGA-55-8096-01A 67 years, female, white, stage:Stage IB, dead, 719 days 3854.3
TCGA-55-8208-01A 73 years, female, white, stage:Stage IA, alive, 674 days 3848.5
TCGA-73-7499-01A 81 years, female, white, stage:Stage IB, dead, 1531 days 3809.8
TCGA-55-8203-01A 69 years, female, white, stage:Stage IA, alive, 547 days 3756.9
TCGA-55-8620-01A 60 years, male, white, stage:Stage IV, dead, 375 days 3733.1
TCGA-95-A4VN-01A 62 years, female, white, stage:Stage IIA, alive, 553 days 3731.1
TCGA-71-8520-01A 60 years, female, asian, stage:Stage IB, dead, 210 days 3730.2
TCGA-4B-A93V-01A 52 years, female, black or african american, stage:Stage IA, dead, 300 days 3722.8
TCGA-55-7911-01A 70 years, female, white, stage:Stage IA, alive, 537 days 3717.2
TCGA-86-6851-01A 73 years, female, white, stage:Stage IIA, alive, 179 days 3717.1
TCGA-S2-AA1A-01A 68 years, female, black or african american, stage:Stage IA, alive, 513 days 3715.7
TCGA-86-8075-01A 66 years, female, white, stage:Stage IB, dead, 694 days 3715.3
TCGA-80-5608-01A female, stage:Stage IA, alive, 2832 days 3701.3
TCGA-78-7153-01A 65 years, female, white, stage:Stage IB, alive, 3635 days 3692.1
TCGA-95-7043-01A 63 years, female, white, stage:Stage IA, dead, 503 days 3691.4
TCGA-55-5899-01A 58 years, male, white, stage:'--, alive, 930 days 3688.8
TCGA-55-A4DF-01A 88 years, male, white, stage:Stage IA, dead, 440 days 3675.9
TCGA-97-7554-01A 83 years, female, white, stage:Stage IIIA, alive, 775 days 3675.7
TCGA-86-8358-01A 44 years, male, white, stage:Stage IB, alive, 653 days 3672.3
TCGA-62-8402-01A 73 years, female, white, stage:Stage IIIA, dead, 1498 days 3656.1
TCGA-86-7713-01A 70 years, male, white, stage:Stage IIA, alive, 1157 days 3653.7
TCGA-44-3396-01A 74 years, female, white, stage:Stage IIIA, alive, 1130 days 3612.9
TCGA-MP-A4TD-01A 71 years, male, white, stage:Stage IIIA, dead, 307 days 3602.8
TCGA-MN-A4N4-01A 57 years, male, white, stage:Stage IA, alive, 1175 days 3597.0
TCGA-49-6743-01A 81 years, female, white, stage:Stage IIIA, alive, 1621 days 3594.4
TCGA-55-6981-01A 53 years, female, white, stage:Stage IIIA, dead, 1379 days 3593.9
TCGA-MN-A4N1-01A 60 years, male, black or african american, stage:Stage IIA, alive, 827 days 3591.1
TCGA-69-8254-01A 85 years, male, white, stage:'--, alive, 409 days 3588.9
TCGA-55-6982-01A 79 years, female, white, stage:Stage IIB, dead, 995 days 3586.9
TCGA-75-7027-01A male, stage:Stage IB, alive, 3059 days 3547.6
TCGA-J2-A4AD-01A 61 years, female, white, stage:Stage IA, dead, 550 days 3528.2
TCGA-55-7570-01A 60 years, male, black or african american, stage:Stage IA, alive, 824 days 3519.8
TCGA-44-A4SU-01A 67 years, female, white, stage:Stage IA, dead, 409 days 3470.1
TCGA-44-A479-01A 73 years, female, black or african american, stage:Stage IB, alive, 486 days 3461.2
TCGA-86-8674-01A 50 years, male, white, stage:Stage IIA, alive, 806 days 3439.2
TCGA-44-5644-01A 51 years, female, white, stage:Stage IB, alive, 863 days 3417.4
TCGA-49-4512-01A 69 years, female, white, stage:Stage IIIA, dead, 905 days 3410.4
TCGA-MP-A4TA-01A 75 years, female, white, stage:Stage IA, dead, 950 days 3393.3
TCGA-44-7672-01A 52 years, female, white, stage:Stage IA, alive, 719 days 3390.8
TCGA-NJ-A4YF-01A 50 years, female, black or african american, stage:Stage IA, alive, 2161 days 3369.0
TCGA-55-8092-01A 75 years, male, white, stage:Stage IIB, dead, 154 days 3347.7
TCGA-86-8074-01A 62 years, female, white, stage:Stage IIA, alive, 24 days 3307.5
TCGA-55-6971-01A 59 years, female, white, stage:Stage IB, alive, 1400 days 3273.6
TCGA-O1-A52J-01A 74 years, female, white, stage:Stage IA, dead, 1798 days 3258.3
TCGA-62-A46S-01A 73 years, male, white, stage:Stage IB, dead, 1653 days 3235.9
TCGA-55-6642-01A 63 years, male, white, stage:Stage IB, alive, 2449 days 3227.1
TCGA-53-A4EZ-01A 63 years, male, white, stage:Stage IIA, alive, 1071 days 3183.1
TCGA-L4-A4E5-01A 48 years, female, white, stage:Stage I, alive, 578 days 3180.4
TCGA-49-AARE-01A 51 years, female, black or african american, stage:Stage IA, dead, 1229 days 3178.6
TCGA-91-6849-01A 75 years, female, black or african american, stage:Stage IIIA, alive, 35 days 3168.8
TCGA-49-AAQV-01A 63 years, female, black or african american, stage:Stage II, dead, 677 days 3150.3
TCGA-MP-A4TE-01A 56 years, male, white, stage:Stage IIA, dead, 896 days 3138.1
TCGA-55-A494-01A 61 years, female, white, stage:Stage IB, alive, 481 days 3128.0
TCGA-50-6590-01A 72 years, female, white, stage:Stage IB, dead, 1288 days 3117.4
TCGA-L9-A7SV-01A 69 years, male, black or african american, stage:Stage IIA, alive, 565 days 3097.1
TCGA-50-7109-01A 60 years, male, white, stage:Stage IA, dead, 308 days 3051.4
TCGA-69-7761-01A 84 years, male, white, stage:Stage IB, alive, 186 days 3017.4
TCGA-55-8508-01A 60 years, female, black or african american, stage:Stage IIA, alive, 617 days 3009.0
TCGA-64-5779-01A 61 years, male, white, stage:Stage IIIA, alive, 864 days 2981.9
TCGA-86-7711-01A 70 years, male, white, stage:Stage IIA, dead, 1046 days 2978.5
TCGA-78-7535-01A 45 years, male, white, stage:Stage IB, dead, 949 days 2976.5
TCGA-49-AAR4-01A 51 years, male, black or african american, stage:Stage IIIA, dead, 879 days 2953.8
TCGA-91-6831-01A 66 years, male, white, stage:Stage IB, alive, 310 days 2882.9
TCGA-78-7540-01A 66 years, female, white, stage:Stage IB, dead, 1197 days 2866.7
TCGA-93-8067-01A 77 years, male, asian, stage:Stage IB, alive, 186 days 2791.1
TCGA-MP-A4T4-01A 68 years, female, white, stage:Stage IIB, dead, 2617 days 2782.4
TCGA-L9-A444-01A 60 years, female, white, stage:Stage IA, alive, 307 days 2757.0
TCGA-NJ-A4YQ-01A 69 years, female, white, stage:Stage IA, alive, 1432 days 2730.6
TCGA-55-6968-01A 61 years, male, white, stage:Stage IV, dead, 1293 days 2700.0
TCGA-69-A59K-01A 60 years, female, black or african american, stage:Stage IIB, alive, 591 days 2649.6
TCGA-55-8506-01A 62 years, female, white, stage:Stage IIB, alive, 11 days 2649.1
TCGA-NJ-A55R-01A 67 years, male, white, stage:Stage IA, alive, 603 days 2583.6
TCGA-91-A4BC-01A 59 years, male, white, stage:Stage IIA, alive, 44 days 2514.6
TCGA-50-5946-01A 62 years, male, white, stage:Stage IA, alive, 1617 days 2494.4
TCGA-49-4507-01A 73 years, female, white, stage:Stage IIIA, dead, 268 days 2419.9
TCGA-55-8094-01A 51 years, male, white, stage:Stage IV, alive, 541 days 2403.9
TCGA-55-A493-01A 54 years, female, white, stage:Stage IB, alive, 28 days 2311.3
TCGA-49-4514-01A 79 years, female, white, stage:Stage IA, alive, 1700 days 2065.2
TCGA-49-AARQ-01A 41 years, female, black or african american, stage:Stage I, alive, 6732 days 1275.0
TCGA-49-AAR2-01A 64 years, male, black or african american, stage:Stage IB, alive, 2224 days 1260.5
Show allShow less
LUNG ADENOCARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

EEF1A1 is not prognostic in Lung Adenocarcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 6597.65
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 8788.2
Number of samples 105
Samples
Sample Description pTPM
L731 59 years, female, stage:Stage IA, dead, 964 days 18965.4
L567 83 years, female, stage:Stage IIIA, dead, 1299 days 16560.1
L603 70 years, female, stage:Stage IB, dead, 972 days 15240.7
L829 76 years, male, stage:Stage IA, alive, 2173 days 15119.8
L683 77 years, female, stage:Stage IIA, dead, 612 days 15048.6
L850 77 years, male, stage:Stage IIIA, dead, 997 days 14548.9
L561 62 years, female, stage:Stage IA, alive, 2543 days 13081.5
L473 66 years, female, stage:Stage IA, alive, 3021 days 13014.5
L439 80 years, male, stage:Stage IIB, dead, 2773 days 12984.7
L778 65 years, female, stage:Stage IA, alive, 1600 days 12861.6
L890 56 years, female, stage:Stage IIB, dead, 1264 days 12216.7
L662 66 years, male, stage:Stage IA, dead, 865 days 12125.3
L791 66 years, female, stage:Stage IIIA, dead, 368 days 12100.0
L773 64 years, female, stage:Stage IV, dead, 311 days 11860.4
L851 70 years, male, stage:Stage IB, dead, 1315 days 11790.7
L808 48 years, female, stage:Stage IA, alive, 3001 days 11612.1
L871 74 years, male, stage:Stage IB, dead, 873 days 11597.4
L689 69 years, male, stage:Stage IA, alive, 1943 days 11328.6
L885 62 years, female, stage:Stage IA, alive, 1618 days 11124.6
L546 57 years, male, stage:Stage IA, dead, 973 days 11101.9
L816 73 years, female, stage:Stage IIA, dead, 353 days 10668.1
L619 68 years, female, stage:Stage IIIA, dead, 1905 days 10643.5
L865 75 years, female, stage:Stage IIB, alive, 1927 days 10585.8
L875 69 years, female, stage:Stage IA, alive, 1675 days 10344.4
L511 56 years, female, stage:Stage IIIA, alive, 2942 days 10342.1
L782 73 years, female, stage:Stage IIB, alive, 3371 days 10279.7
L867 62 years, female, stage:Stage IIIA, dead, 317 days 10110.3
L602 69 years, female, stage:Stage IA, alive, 2277 days 10043.0
L605 74 years, female, stage:Stage IA, alive, 2460 days 9976.7
L682 64 years, female, stage:Stage IIB, dead, 840 days 9822.8
L842 62 years, female, stage:Stage IB, alive, 2005 days 9806.5
L673 74 years, female, stage:Stage IA, dead, 568 days 9795.3
L678 65 years, female, stage:Stage IB, dead, 1114 days 9723.6
L616 54 years, male, stage:Stage IA, dead, 410 days 9694.3
L620 70 years, female, stage:Stage IIIA, dead, 338 days 9531.8
L695 68 years, female, stage:Stage IB, dead, 1762 days 9524.9
L874 56 years, female, stage:Stage IIIA, alive, 1733 days 9492.1
L462 67 years, male, stage:Stage IIIA, dead, 568 days 9377.7
L557 81 years, female, stage:Stage IB, alive, 2580 days 9235.0
L738 74 years, female, stage:Stage IB, dead, 1314 days 9230.0
L400 78 years, male, stage:Stage IIA, dead, 1233 days 9178.2
L656 58 years, male, stage:Stage IA, alive, 2227 days 9139.4
L606 55 years, male, stage:Stage IA, alive, 2336 days 9118.7
L569 76 years, female, stage:Stage IA, alive, 2531 days 9077.4
L458 76 years, female, stage:Stage IA, dead, 223 days 9065.4
L612 80 years, female, stage:Stage IIIA, alive, 2410 days 9056.8
L872 71 years, female, stage:Stage IA, alive, 1793 days 9047.7
L630 65 years, female, stage:Stage IA, dead, 1733 days 8908.3
L617 68 years, male, stage:Stage IIIA, dead, 238 days 8845.3
L585 70 years, female, stage:Stage IIA, dead, 402 days 8838.4
L828 68 years, female, stage:Stage IIB, alive, 2222 days 8704.4
L621 79 years, female, stage:Stage IIIA, dead, 1487 days 8692.9
L877 70 years, female, stage:Stage IA, alive, 1599 days 8660.3
L832 65 years, female, stage:Stage IA, alive, 2145 days 8575.9
L873 62 years, female, stage:Stage IA, alive, 1740 days 8479.5
L446 71 years, female, stage:Stage IIB, dead, 415 days 8445.1
L827 70 years, male, stage:Stage IIB, dead, 1105 days 8330.6
L768 60 years, male, stage:Stage IIIA, dead, 472 days 8310.5
L766 59 years, male, stage:Stage IB, alive, 1793 days 8224.7
L703 71 years, male, stage:Stage IIA, dead, 1137 days 8140.4
L530 76 years, female, stage:Stage IIA, dead, 308 days 8056.0
L826 45 years, female, stage:Stage IV, dead, 935 days 8030.8
L532 69 years, female, stage:Stage IA, dead, 301 days 7891.3
L551 62 years, male, stage:Stage IA, alive, 2924 days 7723.6
L752 65 years, male, stage:Stage IIIA, alive, 1647 days 7720.8
L566 58 years, male, stage:Stage IB, alive, 2489 days 7708.4
L764 66 years, male, stage:Stage IIIA, alive, 1684 days 7639.9
L404 74 years, female, stage:Stage IIA, dead, 2318 days 7595.2
L746 64 years, female, stage:Stage IIIA, dead, 594 days 7534.5
L531 74 years, male, stage:Stage IB, dead, 928 days 7377.2
L493 56 years, female, stage:Stage IIB, alive, 2945 days 7272.3
L601 75 years, male, stage:Stage IB, dead, 2068 days 7247.7
L810 64 years, female, stage:Stage IIIA, dead, 625 days 7149.6
L887 77 years, male, stage:Stage IA, dead, 374 days 6976.2
L879 75 years, male, stage:Stage IV, dead, 873 days 6862.9
L613 72 years, male, stage:Stage IIIA, dead, 19 days 6860.9
L413 72 years, female, stage:Stage IIIA, dead, 313 days 6844.4
L455 52 years, female, stage:Stage IA, alive, 3315 days 6809.6
L565 59 years, female, stage:Stage IB, dead, 543 days 6686.8
L688 57 years, male, stage:Stage IIIA, dead, 789 days 6597.7
L638 65 years, male, stage:Stage IA, alive, 2076 days 6516.6
L545 60 years, female, stage:Stage IA, alive, 2874 days 6469.5
L838 71 years, female, stage:Stage IA, dead, 1005 days 6469.3
L880 75 years, female, stage:Stage IA, alive, 1767 days 6466.3
L626 76 years, female, stage:Stage IA, dead, 1994 days 6308.7
L728 77 years, male, stage:Stage IIB, dead, 1128 days 6071.9
L401 74 years, male, stage:Stage IIIA, dead, 1888 days 6013.6
L543 65 years, male, stage:Stage IA, alive, 2711 days 6006.4
L749 49 years, female, stage:Stage IIIA, dead, 189 days 5939.1
L440 80 years, male, stage:Stage IIB, dead, 651 days 5916.3
L802 62 years, female, stage:Stage IA, dead, 773 days 5886.8
L663 62 years, female, stage:Stage IB, alive, 2018 days 5881.8
L735 75 years, female, stage:Stage IA, alive, 1830 days 5812.7
L725 64 years, female, stage:Stage IA, alive, 1830 days 5790.8
L484 64 years, female, stage:Stage IA, alive, 2895 days 5624.7
L800 66 years, female, stage:Stage IA, dead, 2417 days 5321.3
L596 74 years, female, stage:Stage IA, alive, 2319 days 5304.2
L541 70 years, female, stage:Stage IIIA, dead, 915 days 5192.4
L593 78 years, male, stage:Stage IA, dead, 2436 days 5181.9
L607 59 years, male, stage:Stage IB, alive, 2572 days 4981.6
L710 72 years, female, stage:Stage IIA, alive, 1775 days 4798.0
L814 73 years, male, stage:Stage IIIA, alive, 2466 days 4415.1
L599 80 years, male, stage:Stage IB, dead, 2083 days 4380.5
L504 65 years, female, stage:Stage IA, dead, 1295 days 4313.7
L831 62 years, female, stage:Stage IB, alive, 2152 days 3762.6
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

EEF1A1 is not prognostic in Lung Squamous Cell Carcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 7888.92
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 6279.3
Number of samples 489
Samples
Sample Description pTPM
TCGA-70-6723-01A 65 years, male, asian, stage:Stage IIA, alive, 375 days 23615.5
TCGA-66-2795-01A 68 years, male, stage:Stage IIIB, alive, 122 days 22327.5
TCGA-66-2793-01A 68 years, male, stage:Stage IIIB, dead, 306 days 21453.5
TCGA-37-4135-01A 68 years, male, white, stage:Stage IB, alive, 207 days 17789.4
TCGA-60-2716-01A 39 years, male, stage:Stage IIB, alive, 1475 days 17639.1
TCGA-51-4080-01A 65 years, male, black or african american, stage:Stage IIIB, dead, 12 days 16169.6
TCGA-46-6026-01A 81 years, male, white, stage:Stage IIB, alive, 423 days 15259.3
TCGA-22-5480-01A 66 years, female, white, stage:Stage IA, dead, 2170 days 14614.9
TCGA-46-3769-01A 57 years, male, white, stage:'--, alive, 135 days 14123.7
TCGA-21-1078-01A 77 years, male, white, stage:Stage IB, dead, 474 days 13210.8
TCGA-21-1080-01A 66 years, male, white, stage:Stage IB, alive, 3724 days 13087.2
TCGA-56-8307-01A 55 years, female, white, stage:Stage IIB, alive, 818 days 12948.0
TCGA-66-2765-01A 64 years, male, stage:Stage IB, alive, 61 days 12622.0
TCGA-22-4604-01A 73 years, male, white, stage:Stage IIA, dead, 399 days 11864.5
TCGA-66-2794-01A 64 years, male, stage:Stage IIIB, alive, 1645 days 11573.9
TCGA-66-2766-01A 54 years, male, stage:Stage IIIA, alive, 31 days 11561.1
TCGA-21-1083-01A 75 years, male, white, stage:Stage IA, dead, 1315 days 11330.0
TCGA-18-3412-01A 52 years, male, white, stage:Stage IB, dead, 345 days 11263.5
TCGA-66-2786-01A 68 years, female, stage:Stage IA, alive, 790 days 11144.8
TCGA-66-2757-01A 65 years, female, stage:Stage IA, dead, 1338 days 11135.6
TCGA-18-3410-01A 81 years, male, stage:Stage IIB, dead, 146 days 11130.8
TCGA-18-3409-01A 74 years, male, white, stage:Stage IA, alive, 3747 days 10869.2
TCGA-22-1012-01A 80 years, female, white, stage:Stage IB, dead, 429 days 10699.9
TCGA-34-5234-01A 71 years, female, white, stage:Stage IA, alive, 2271 days 10693.4
TCGA-18-3408-01A 77 years, female, white, stage:Stage IB, dead, 2304 days 10607.8
TCGA-77-7142-01A 59 years, female, white, stage:Stage IB, alive, 2227 days 10594.8
TCGA-43-6770-01A 59 years, female, black or african american, stage:Stage IB, alive, 653 days 10541.5
TCGA-46-3768-01A 58 years, male, white, stage:Stage IIIA, dead, 299 days 10523.6
TCGA-18-3406-01A 67 years, male, white, stage:Stage IA, dead, 371 days 10520.5
TCGA-66-2778-01A 68 years, female, stage:Stage IIIB, alive, 578 days 10270.9
TCGA-85-A4PA-01A 61 years, male, white, stage:Stage IB, alive, 741 days 10217.2
TCGA-22-4593-01A 77 years, male, white, stage:Stage IIA, dead, 1067 days 10093.4
TCGA-60-2708-01A 64 years, female, white, stage:Stage IIB, alive, 2447 days 9931.5
TCGA-33-4566-01A 40 years, male, white, stage:Stage IB, dead, 5287 days 9916.3
TCGA-33-4547-01A 68 years, male, white, stage:Stage IB, alive, 2419 days 9898.9
TCGA-39-5037-01A 65 years, male, white, stage:Stage IIA, alive, 1690 days 9698.9
TCGA-34-2600-01A 76 years, female, white, stage:Stage IA, dead, 1874 days 9694.1
TCGA-63-7023-01A male, stage:Stage IIA, alive, 1682 days 9687.8
TCGA-39-5011-01A 70 years, female, white, stage:Stage IA, alive, 4053 days 9679.2
TCGA-90-A4ED-01A 69 years, male, white, stage:Stage IB, alive, 615 days 9655.5
TCGA-37-4129-01A 52 years, female, white, stage:Stage IA, alive, 242 days 9580.3
TCGA-33-4583-01A 73 years, male, white, stage:Stage IA, dead, 4601 days 9509.4
TCGA-43-A474-01A 66 years, male, white, stage:Stage IIA, alive, 353 days 9464.1
TCGA-60-2712-01A 79 years, female, white, stage:Stage IIB, dead, 274 days 9434.5
TCGA-98-A53I-01A 64 years, male, white, stage:Stage IIA, alive, 565 days 9360.3
TCGA-60-2696-01A 76 years, female, black or african american, stage:Stage IIA, dead, 109 days 9340.4
TCGA-43-3394-01A 52 years, male, black or african american, stage:Stage IB, dead, 1190 days 9291.8
TCGA-39-5035-01A 72 years, female, white, stage:Stage IA, alive, 2080 days 9256.6
TCGA-34-7107-01A 70 years, male, white, stage:Stage II, dead, 34 days 9230.4
TCGA-66-2727-01A 55 years, female, stage:Stage IB, dead, 516 days 9192.7
TCGA-60-2698-01A 62 years, male, white, stage:Stage IIB, dead, 311 days 9156.7
TCGA-37-4133-01A 63 years, male, white, stage:Stage IIIA, alive, 238 days 9086.1
TCGA-37-4141-01A 65 years, female, white, stage:Stage IA, alive, 12 days 9049.5
TCGA-46-3767-01A 76 years, male, white, stage:Stage IA, alive, 396 days 8992.2
TCGA-22-1017-01A 62 years, male, white, stage:Stage IA, dead, 1485 days 8957.3
TCGA-56-7582-01A 83 years, male, white, stage:Stage IB, alive, 601 days 8935.5
TCGA-66-2754-01A 67 years, male, stage:Stage IIIA, alive, 61 days 8911.9
TCGA-22-5477-01A 65 years, male, white, stage:Stage IA, dead, 1346 days 8898.2
TCGA-21-1075-01A 57 years, male, white, stage:Stage IIB, alive, 2134 days 8886.7
TCGA-56-8629-01A 63 years, male, white, stage:Stage IIA, alive, 481 days 8865.0
TCGA-43-8116-01A 73 years, male, white, stage:Stage IA, alive, 358 days 8847.8
TCGA-18-5595-01A 50 years, male, stage:Stage IB, dead, 827 days 8839.3
TCGA-66-2758-01A 71 years, male, stage:Stage IB, alive, 639 days 8828.9
TCGA-77-7465-01A 58 years, male, white, stage:Stage IIA, alive, 990 days 8754.6
TCGA-58-8390-01A 70 years, male, white, stage:Stage IIA, alive, 911 days 8749.5
TCGA-94-A5I4-01A 61 years, male, white, stage:Stage IIA, alive, 491 days 8747.9
TCGA-85-8351-01A 72 years, male, white, stage:Stage IIA, alive, 510 days 8721.5
TCGA-22-5482-01A 81 years, male, white, stage:Stage IB, dead, 357 days 8712.5
TCGA-66-2755-01A 63 years, male, stage:Stage IB, alive, 28 days 8697.8
TCGA-43-3920-01A 71 years, male, white, stage:Stage IB, alive, 1007 days 8650.7
TCGA-22-5473-01A 78 years, male, white, stage:'--, dead, 1933 days 8648.0
TCGA-68-8251-01A 78 years, male, white, stage:Stage IB, alive, 406 days 8629.5
TCGA-66-2800-01A 70 years, male, stage:Stage IIIB, alive, 1492 days 8622.3
TCGA-33-4538-01A 66 years, male, white, stage:Stage IIIA, dead, 2979 days 8612.6
TCGA-77-8140-01A 66 years, female, stage:Stage IIB, dead, 351 days 8599.8
TCGA-18-3421-01A 65 years, male, white, stage:Stage IB, alive, 2645 days 8589.2
TCGA-56-7580-01A 84 years, male, white, stage:Stage IB, alive, 925 days 8581.5
TCGA-66-2753-01A 69 years, male, stage:Stage IB, alive, 31 days 8570.9
TCGA-66-2734-01A 62 years, female, stage:Stage IB, alive, 1311 days 8565.1
TCGA-22-1016-01A 65 years, male, white, stage:Stage IB, dead, 822 days 8503.3
TCGA-39-5019-01A 70 years, male, white, stage:Stage IB, alive, 3387 days 8496.6
TCGA-22-5483-01A 74 years, male, white, stage:Stage IIA, dead, 573 days 8467.5
TCGA-O2-A5IB-01A 71 years, female, white, stage:Stage III, dead, 340 days 8423.2
TCGA-33-4533-01A 76 years, female, black or african american, stage:Stage IB, alive, 4068 days 8395.6
TCGA-66-2769-01A 75 years, male, stage:Stage IIIB, dead, 215 days 8363.7
TCGA-37-3789-01A 65 years, male, white, stage:Stage IB, alive, 13 days 8348.3
TCGA-34-5239-01A 75 years, male, white, stage:Stage IIIA, alive, 1834 days 8338.7
TCGA-33-6737-01A 71 years, male, white, stage:Stage IIIA, dead, 601 days 8308.5
TCGA-96-7545-01A 73 years, male, white, stage:Stage IA, dead, 1736 days 8280.4
TCGA-66-2789-01A 73 years, male, stage:Stage IIIB, dead, 123 days 8270.5
TCGA-46-3766-01A 62 years, female, white, stage:Stage IA, alive, 370 days 8257.2
TCGA-33-4532-01A 68 years, male, white, stage:Stage IB, dead, 3924 days 8226.0
TCGA-56-8201-01A 74 years, male, white, stage:Stage IIB, dead, 397 days 8220.3
TCGA-90-7769-01A 55 years, male, white, stage:Stage IIB, alive, 358 days 8194.2
TCGA-18-3411-01A 63 years, female, stage:Stage IIIA, alive, 3576 days 8182.4
TCGA-39-5028-01A 75 years, male, white, stage:Stage IIIA, dead, 52 days 8110.0
TCGA-34-5241-01A 79 years, male, white, stage:Stage IB, dead, 515 days 8096.2
TCGA-66-2787-01A 57 years, male, stage:Stage IA, alive, 1217 days 8077.9
TCGA-66-2781-01A 67 years, male, stage:Stage IB, alive, 121 days 8059.4
TCGA-66-2771-01A 60 years, male, stage:Stage IIB, alive, 578 days 8053.4
TCGA-77-8154-01A 67 years, male, stage:Stage IA, alive, 1841 days 7975.6
TCGA-34-5240-01A 73 years, female, white, stage:Stage IIB, alive, 1541 days 7931.2
TCGA-66-2737-01A 72 years, male, stage:Stage IIB, alive, 61 days 7930.5
TCGA-92-7341-01A 71 years, male, white, stage:Stage IB, alive, 106 days 7909.6
TCGA-39-5039-01A 76 years, male, white, stage:Stage IIA, dead, 544 days 7868.2
TCGA-85-8352-01A 67 years, male, white, stage:Stage IIIA, dead, 161 days 7825.6
TCGA-63-A5MM-01A 69 years, female, stage:Stage IIB, dead, 456 days 7814.7
TCGA-56-5898-01A 69 years, male, white, stage:Stage IA, alive, 555 days 7809.8
TCGA-18-3417-01A 65 years, male, stage:Stage IV, dead, 1097 days 7804.4
TCGA-85-6798-01A 57 years, male, white, stage:Stage IIIA, dead, 195 days 7801.3
TCGA-90-A4EE-01A 53 years, male, white, stage:Stage IIA, alive, 688 days 7792.1
TCGA-66-2780-01A 65 years, male, stage:Stage IB, dead, 366 days 7782.1
TCGA-51-6867-01A 72 years, female, white, stage:Stage I, dead, 1856 days 7674.9
TCGA-77-6842-01A 79 years, male, white, stage:Stage IIB, dead, 899 days 7672.0
TCGA-43-6771-01A 85 years, male, white, stage:Stage IB, dead, 166 days 7570.7
TCGA-60-2714-01A 66 years, female, white, stage:Stage IIB, alive, 1531 days 7487.9
TCGA-66-2785-01A 65 years, male, stage:Stage IB, alive, 60 days 7466.4
TCGA-98-A53D-01A 68 years, male, white, stage:Stage IIB, dead, 645 days 7463.2
TCGA-60-2719-01A 83 years, female, white, stage:Stage IB, alive, 1297 days 7409.8
TCGA-22-4596-01A 69 years, female, white, stage:Stage IB, dead, 17 days 7395.0
TCGA-18-4086-01A 64 years, male, stage:Stage IB, dead, 85 days 7330.6
TCGA-77-8128-01A 60 years, male, stage:Stage IIIA, dead, 1150 days 7325.2
TCGA-46-3765-01A 59 years, female, white, stage:Stage IA, alive, 405 days 7323.8
TCGA-85-8664-01A 73 years, male, white, stage:Stage IIB, dead, 550 days 7295.1
TCGA-33-4582-01A 55 years, male, white, stage:Stage IA, dead, 3149 days 7279.4
TCGA-66-2791-01A 66 years, male, stage:Stage IIIB, dead, 153 days 7269.5
TCGA-39-5016-01A 44 years, male, white, stage:Stage IIA, alive, 3850 days 7261.7
TCGA-85-8071-01A 52 years, male, white, stage:Stage IIA, alive, 815 days 7240.6
TCGA-22-5491-01A 74 years, male, white, stage:Stage IA, dead, 1713 days 7210.6
TCGA-22-0940-01A 71 years, male, white, stage:Stage IIA, dead, 669 days 7193.8
TCGA-85-6175-01A 63 years, female, white, stage:Stage IIB, dead, 294 days 7179.2
TCGA-60-2711-01A 64 years, female, white, stage:Stage IB, alive, 1260 days 7177.9
TCGA-22-4594-01A 60 years, female, stage:Stage IIIA, dead, 1470 days 7177.5
TCGA-66-2763-01A 63 years, female, stage:Stage IB, alive, 30 days 7175.2
TCGA-60-2723-01A 74 years, female, white, stage:Stage IB, alive, 1092 days 7172.9
TCGA-34-5929-01A 78 years, female, white, stage:Stage IB, dead, 151 days 7162.0
TCGA-85-6560-01A 59 years, male, white, stage:Stage IIA, alive, 1259 days 7150.6
TCGA-77-6843-01A 74 years, male, white, stage:Stage IIA, dead, 2224 days 7126.9
TCGA-43-7656-01A 71 years, male, white, stage:Stage IA, alive, 596 days 7121.5
TCGA-60-2715-01A 51 years, male, white, stage:Stage IA, dead, 1075 days 7111.4
TCGA-85-8052-01A 53 years, male, white, stage:Stage IIB, alive, 734 days 7109.9
TCGA-39-5036-01A 73 years, male, white, stage:Stage IB, alive, 2165 days 7107.1
TCGA-22-5472-01A 67 years, male, white, stage:Stage IB, dead, 1975 days 7101.4
TCGA-66-2759-01A 66 years, male, stage:Stage IIIA, alive, 762 days 7049.5
TCGA-60-2695-01A 74 years, female, white, stage:Stage IB, alive, 642 days 7026.0
TCGA-52-7810-01A 60 years, female, white, stage:Stage IIB, alive, 923 days 7013.2
TCGA-60-2703-01A 73 years, male, white, stage:Stage IIB, dead, 2945 days 7002.5
TCGA-34-5231-01A 72 years, male, white, stage:Stage IA, dead, 1984 days 6964.6
TCGA-21-5786-01A 64 years, male, white, stage:Stage IB, alive, 1032 days 6912.8
TCGA-34-5927-01A 70 years, female, white, stage:Stage IA, alive, 1361 days 6890.0
TCGA-O2-A52S-01A 57 years, female, white, stage:Stage III, dead, 387 days 6879.8
TCGA-63-A5MY-01A 63 years, male, stage:Stage IA, alive, 1052 days 6872.3
TCGA-60-2725-01A 74 years, male, white, stage:Stage IB, alive, 816 days 6858.0
TCGA-33-4586-01A 57 years, male, white, stage:Stage IIIA, dead, 428 days 6848.7
TCGA-18-5592-01A 57 years, male, stage:Stage IIB, alive, 1519 days 6831.4
TCGA-22-1002-01A 69 years, male, white, stage:Stage IA, dead, 131 days 6822.8
TCGA-85-8354-01A 53 years, male, white, stage:Stage IB, alive, 995 days 6791.7
TCGA-98-A53H-01A 76 years, female, white, stage:Stage IA, alive, 618 days 6786.3
TCGA-56-8624-01A 84 years, male, white, stage:Stage IIB, alive, 420 days 6777.6
TCGA-66-2767-01A 62 years, male, stage:Stage IIIB, alive, 61 days 6775.4
TCGA-77-6845-01A 69 years, male, white, stage:Stage IIB, dead, 708 days 6682.4
TCGA-66-2777-01A 71 years, male, stage:Stage IB, alive, 61 days 6679.5
TCGA-34-5232-01A 75 years, female, black or african american, stage:Stage IIA, alive, 2471 days 6664.1
TCGA-NC-A5HE-01A 60 years, male, white, stage:Stage IIB, alive, 2336 days 6650.8
TCGA-94-7943-01A 80 years, male, white, stage:Stage IA, alive, 559 days 6650.5
TCGA-77-A5GF-01A 70 years, male, stage:Stage IIA, dead, 840 days 6613.5
TCGA-34-5928-01A 83 years, female, white, stage:Stage IIB, alive, 1196 days 6580.6
TCGA-34-5236-01A 60 years, male, white, stage:Stage IIB, dead, 276 days 6568.5
TCGA-77-8150-01A 64 years, male, stage:Stage IIIA, dead, 1655 days 6561.2
TCGA-18-3407-01A 72 years, male, asian, stage:Stage IB, dead, 136 days 6558.5
TCGA-21-5787-01A 65 years, male, black or african american, stage:Stage IIIA, dead, 329 days 6540.9
TCGA-66-2768-01A 57 years, male, stage:Stage IIB, alive, 61 days 6539.4
TCGA-56-7222-01A 60 years, male, white, stage:Stage IB, dead, 562 days 6532.2
TCGA-85-A53L-01A 63 years, male, asian, stage:Stage IIA, alive, 377 days 6520.8
TCGA-56-1622-01A 58 years, male, white, stage:Stage IB, dead, 881 days 6499.9
TCGA-34-2608-01A 84 years, male, white, stage:Stage IB, dead, 1000 days 6481.8
TCGA-MF-A522-01A 54 years, male, white, stage:Stage IB, dead, 360 days 6476.8
TCGA-96-7544-01A 83 years, male, white, stage:Stage IIB, dead, 2160 days 6472.4
TCGA-66-2742-01A 70 years, male, stage:Stage IV, alive, 641 days 6468.6
TCGA-21-1071-01A 67 years, male, white, stage:Stage IB, dead, 1426 days 6457.2
TCGA-77-A5FZ-01A 64 years, male, stage:Stage IIIB, dead, 3838 days 6452.1
TCGA-39-5024-01A 65 years, female, white, stage:Stage IIIA, alive, 2510 days 6436.5
TCGA-85-8288-01A 70 years, male, white, stage:Stage IIA, dead, 402 days 6429.4
TCGA-85-8355-01A 63 years, male, white, stage:Stage IA, alive, 61 days 6405.2
TCGA-22-5474-01A 74 years, male, white, stage:Stage IB, dead, 445 days 6392.8
TCGA-63-A5MH-01A 68 years, male, stage:Stage IA, alive, 2026 days 6379.8
TCGA-85-A4CL-01A 65 years, male, white, stage:Stage IA, dead, 921 days 6378.5
TCGA-21-1072-01A 75 years, male, white, stage:Stage IB, alive, 3016 days 6375.4
TCGA-85-8070-01A 71 years, male, white, stage:Stage IB, alive, 960 days 6359.2
TCGA-66-2770-01A 79 years, male, stage:Stage IB, alive, 700 days 6348.8
TCGA-98-A539-01A 63 years, male, white, stage:Stage IIB, alive, 173 days 6343.3
TCGA-51-4079-01A 73 years, female, black or african american, stage:Stage IB, dead, 12 days 6338.0
TCGA-NC-A5HO-01A 70 years, female, white, stage:Stage IIIA, alive, 1336 days 6328.5
TCGA-77-8144-01A 70 years, male, stage:Stage IB, alive, 833 days 6295.3
TCGA-22-0944-01A 61 years, male, white, stage:Stage IB, dead, 223 days 6291.9
TCGA-18-4721-01A 74 years, male, white, stage:Stage IA, alive, 4694 days 6275.4
TCGA-96-A4JL-01A 78 years, female, asian, stage:Stage IIA, alive, 842 days 6275.2
TCGA-58-A46M-01A 61 years, male, white, stage:Stage IIB, alive, 1072 days 6263.3
TCGA-94-8491-01A 73 years, male, white, stage:Stage IIA, alive, 810 days 6256.4
TCGA-58-A46L-01A 73 years, male, white, stage:Stage IIIA, alive, 1723 days 6249.4
TCGA-NC-A5HL-01A 73 years, male, white, stage:Stage IIA, dead, 88 days 6237.2
TCGA-33-A4WN-01A 60 years, male, white, stage:Stage IB, dead, 143 days 6214.2
TCGA-18-3415-01A 77 years, male, stage:Stage IB, dead, 2803 days 6212.9
TCGA-37-4132-01A 61 years, female, white, stage:Stage IV, alive, 227 days 6206.5
TCGA-34-2596-01A 70 years, male, white, stage:Stage IIB, dead, 80 days 6201.0
TCGA-18-3414-01A 73 years, male, asian, stage:Stage IV, dead, 716 days 6200.4
TCGA-85-6561-01A 66 years, male, white, stage:Stage IB, alive, 1224 days 6175.5
TCGA-94-7557-01A 73 years, male, black or african american, stage:Stage IB, dead, 5 days 6163.6
TCGA-56-7223-01A 66 years, male, white, stage:Stage IIIA, dead, 442 days 6138.6
TCGA-66-2744-01A 71 years, male, stage:Stage IIB, alive, 30 days 6122.3
TCGA-77-7139-01A 56 years, male, white, stage:Stage IIB, alive, 4261 days 6121.7
TCGA-66-2788-01A 56 years, male, stage:Stage IB, alive, 699 days 6106.0
TCGA-LA-A446-01A 68 years, male, white, stage:Stage IA, alive, 401 days 6104.6
TCGA-37-4130-01A 56 years, male, white, stage:Stage IA, alive, 247 days 6099.2
TCGA-66-2792-01A 58 years, male, stage:Stage IIB, alive, 913 days 6083.6
TCGA-58-8387-01A 60 years, male, white, stage:Stage IIA, dead, 403 days 6054.7
TCGA-70-6722-01A 47 years, male, asian, stage:Stage IIIA, alive, 367 days 6053.3
TCGA-NK-A5D1-01A 57 years, male, white, stage:Stage IIA, alive, 511 days 6046.6
TCGA-NC-A5HH-01A 53 years, male, white, stage:Stage IA, alive, 37 days 6045.9
TCGA-22-4613-01A 73 years, female, white, stage:Stage IA, dead, 358 days 6039.1
TCGA-L3-A524-01A 45 years, female, white, stage:Stage IIB, dead, 490 days 6037.8
TCGA-60-2721-01A 73 years, male, white, stage:Stage IB, alive, 983 days 6037.6
TCGA-77-8133-01A 74 years, male, stage:Stage IIA, dead, 1640 days 6014.2
TCGA-60-2724-01A 47 years, male, white, stage:Stage IIIA, alive, 717 days 5997.5
TCGA-63-A5MB-01A 62 years, male, stage:Stage IB, alive, 3123 days 5987.4
TCGA-85-A512-01A 46 years, male, white, stage:Stage IIA, alive, 465 days 5960.2
TCGA-60-2720-01A 60 years, female, white, stage:Stage IB, alive, 97 days 5954.1
TCGA-56-7221-01A 79 years, male, white, stage:Stage IB, alive, 608 days 5948.0
TCGA-77-A5GA-01A 76 years, male, stage:Stage IB, alive, 1280 days 5945.1
TCGA-77-7335-01A 62 years, female, white, stage:Stage IIIB, dead, 2133 days 5921.7
TCGA-21-1076-01A 54 years, female, white, stage:Stage IB, alive, 1852 days 5917.7
TCGA-85-7843-01A 50 years, male, white, stage:Stage IIA, alive, 35 days 5899.9
TCGA-85-8287-01A 72 years, male, white, stage:Stage IA, dead, 23 days 5899.0
TCGA-60-2707-01A 70 years, male, stage:Stage IB, dead, 667 days 5897.6
TCGA-85-8353-01A 72 years, male, white, stage:Stage IIIA, dead, 94 days 5878.7
TCGA-85-8049-01A 57 years, male, white, stage:Stage IB, alive, 579 days 5856.4
TCGA-60-2713-01A 64 years, male, white, stage:Stage IB, alive, 1731 days 5849.5
TCGA-52-7811-01A 67 years, male, white, stage:Stage IB, dead, 266 days 5836.6
TCGA-98-7454-01A 73 years, male, white, stage:Stage IB, alive, 652 days 5795.2
TCGA-85-7698-01A 48 years, male, white, stage:Stage IA, alive, 952 days 5788.2
TCGA-22-5489-01A 64 years, male, white, stage:Stage IA, dead, 1912 days 5784.2
TCGA-68-8250-01A 66 years, male, black or african american, stage:Stage IA, alive, 244 days 5783.3
TCGA-77-A5G6-01A 66 years, male, stage:Stage IIIA, dead, 678 days 5782.3
TCGA-O2-A52N-01A 78 years, male, white, stage:Stage I, dead, 1006 days 5755.4
TCGA-18-3416-01A 83 years, male, stage:Stage IIB, dead, 973 days 5754.7
TCGA-66-2782-01A 71 years, male, stage:Stage IIB, dead, 365 days 5750.4
TCGA-51-4081-01A 55 years, male, white, stage:Stage IIB, alive, 911 days 5695.9
TCGA-43-7657-01A 68 years, female, white, stage:Stage IA, alive, 236 days 5689.1
TCGA-18-4083-01A 63 years, male, white, stage:Stage IIB, dead, 188 days 5685.7
TCGA-85-8276-01A 62 years, male, white, stage:Stage IIA, alive, 1050 days 5683.6
TCGA-94-8035-01A 64 years, male, white, stage:Stage IIB, alive, 122 days 5665.5
TCGA-43-A475-01A 67 years, female, white, stage:Stage IIB, alive, 296 days 5664.3
TCGA-77-8146-01A 72 years, male, stage:Stage IA, alive, 3189 days 5660.0
TCGA-37-3792-01A 69 years, male, white, stage:Stage IB, alive, 12 days 5659.1
TCGA-85-8580-01A 52 years, female, white, stage:Stage IB, alive, 1113 days 5647.0
TCGA-22-5481-01A 72 years, female, white, stage:Stage IIB, dead, 2409 days 5642.8
TCGA-O2-A52V-01A 75 years, female, black or african american, stage:Stage II, dead, 1335 days 5623.8
TCGA-77-7138-01A 67 years, male, stage:Stage IB, dead, 340 days 5597.2
TCGA-56-8082-01A 80 years, female, white, stage:Stage IIA, alive, 455 days 5583.8
TCGA-33-AAS8-01A 59 years, female, black or african american, stage:Stage IA, dead, 1114 days 5577.3
TCGA-98-8020-01A 56 years, female, black or african american, stage:Stage IIIA, dead, 84 days 5555.4
TCGA-60-2709-01A 69 years, male, black or african american, stage:Stage IB, alive, 1505 days 5555.1
TCGA-68-7756-01A 84 years, male, white, stage:Stage IIIA, alive, 202 days 5551.6
TCGA-98-8022-01A 61 years, male, white, stage:Stage IA, dead, 933 days 5544.1
TCGA-21-1077-01A 64 years, male, white, stage:Stage IIB, dead, 1058 days 5543.4
TCGA-37-A5EN-01A 59 years, male, white, stage:Stage IIIB, alive, 660 days 5539.0
TCGA-60-2710-01A 67 years, female, white, stage:Stage IIA, alive, 2024 days 5533.9
TCGA-22-4607-01A 75 years, male, white, stage:Stage IB, dead, 587 days 5526.4
TCGA-77-8130-01A 69 years, male, stage:Stage IIB, alive, 4765 days 5524.3
TCGA-56-8083-01A 56 years, male, white, stage:Stage IB, alive, 150 days 5510.2
TCGA-43-6143-01A 70 years, male, white, stage:Stage IB, alive, 699 days 5496.1
TCGA-77-8138-01A 74 years, male, stage:Stage IB, dead, 539 days 5495.2
TCGA-63-A5MI-01A 65 years, male, stage:Stage IIIA, alive, 1784 days 5476.8
TCGA-22-4601-01A 73 years, female, white, stage:Stage IIIA, dead, 1057 days 5471.5
TCGA-77-6844-01A 74 years, male, white, stage:Stage IIIA, dead, 2284 days 5468.6
TCGA-56-6545-01A 77 years, female, white, stage:Stage IB, alive, 666 days 5458.5
TCGA-77-7140-01A 69 years, female, white, stage:Stage IIB, dead, 632 days 5454.6
TCGA-92-7340-01A 45 years, female, white, stage:Stage IIA, alive, 82 days 5445.7
TCGA-56-A4ZJ-01A 75 years, female, white, stage:Stage IA, alive, 640 days 5429.9
TCGA-85-8666-01A 65 years, male, white, stage:Stage IB, dead, 687 days 5429.8
TCGA-85-8048-01A 62 years, male, white, stage:Stage IA, alive, 765 days 5426.3
TCGA-58-8388-01A 60 years, male, white, stage:Stage IB, dead, 412 days 5396.1
TCGA-85-A4QQ-01A 68 years, male, white, stage:Stage IB, dead, 927 days 5390.7
TCGA-94-8490-01A 70 years, male, white, stage:Stage IIB, alive, 153 days 5374.5
TCGA-56-A4BX-01A 70 years, male, white, stage:Stage IIA, alive, 405 days 5367.0
TCGA-22-1000-01A 76 years, male, white, stage:Stage IB, dead, 454 days 5350.4
TCGA-NC-A5HD-01A 79 years, male, white, stage:Stage IIB, dead, 2 days 5346.1
TCGA-77-7338-01A 64 years, male, white, stage:Stage IB, dead, 5 days 5294.3
TCGA-34-8455-01A 67 years, male, white, stage:Stage IV, dead, 123 days 5291.4
TCGA-39-5031-01A 76 years, female, stage:Stage IA, dead, 1841 days 5265.5
TCGA-22-4591-01A 80 years, male, white, stage:Stage IIIA, dead, 623 days 5257.4
TCGA-85-8350-01A 61 years, male, white, stage:Stage IA, alive, 683 days 5256.0
TCGA-56-7730-01A 73 years, male, white, stage:Stage IIA, dead, 198 days 5255.1
TCGA-98-A53C-01A 77 years, female, white, stage:Stage IA, alive, 822 days 5248.2
TCGA-60-2697-01A 41 years, male, white, stage:Stage IIA, dead, 372 days 5208.7
TCGA-85-A4CN-01A 56 years, female, white, stage:Stage IIB, alive, 1038 days 5203.5
TCGA-92-8064-01A 58 years, male, white, stage:'--, alive, 160 days 5194.5
TCGA-66-2773-01A 69 years, male, stage:Stage IB, dead, 92 days 5179.1
TCGA-90-7767-01A 56 years, male, white, stage:Stage IIB, alive, 89 days 5159.7
TCGA-56-7579-01A 61 years, male, white, stage:Stage IIIA, dead, 951 days 5154.0
TCGA-56-8623-01A 71 years, male, white, stage:Stage IB, dead, 692 days 5148.3
TCGA-58-A46K-01A 59 years, male, white, stage:Stage IIIA, dead, 1045 days 5145.7
TCGA-58-8386-01A 75 years, male, stage:Stage IV, dead, 1 days 5142.0
TCGA-85-7697-01A 49 years, male, white, stage:Stage IIB, alive, 1063 days 5090.1
TCGA-85-A50Z-01A 57 years, male, white, stage:Stage IIA, alive, 493 days 5081.3
TCGA-92-8063-01A 52 years, male, white, stage:Stage IIIA, alive, 122 days 5057.4
TCGA-63-A5MW-01A 76 years, male, stage:Stage IB, alive, 1639 days 5057.3
TCGA-63-A5ML-01A 68 years, male, stage:Stage IB, alive, 1386 days 5043.2
TCGA-77-7463-01A 75 years, male, white, stage:Stage IB, dead, 1423 days 5023.8
TCGA-85-7950-01A 46 years, male, white, stage:Stage IB, alive, 576 days 5022.4
TCGA-L3-A4E7-01A 71 years, male, white, stage:Stage IB, alive, 392 days 5020.5
TCGA-21-1070-01A 60 years, female, black or african american, stage:Stage IIIA, alive, 3636 days 5017.2
TCGA-85-8277-01A 70 years, male, white, stage:Stage IIIA, dead, 307 days 5016.1
TCGA-66-2756-01A 68 years, male, stage:Stage IIIB, alive, 30 days 5010.9
TCGA-90-A59Q-01A 61 years, female, white, stage:Stage IIA, dead, 322 days 5003.8
TCGA-58-8393-01A 68 years, female, white, stage:Stage IB, alive, 1058 days 4977.2
TCGA-60-2704-01A 73 years, male, white, stage:Stage IIB, dead, 1154 days 4964.7
TCGA-39-5029-01A 67 years, male, white, stage:Stage IIIA, dead, 740 days 4957.8
TCGA-56-8308-01A 79 years, male, white, stage:Stage IIB, alive, 517 days 4950.7
TCGA-NC-A5HJ-01A 59 years, male, white, stage:Stage IIB, dead, 418 days 4939.6
TCGA-56-8503-01A 76 years, female, white, stage:Stage IIB, alive, 41 days 4934.1
TCGA-52-7812-01A 68 years, male, white, stage:'--, dead, 835 days 4932.7
TCGA-43-2581-01A 47 years, female, white, stage:Stage IIIA, alive, 1176 days 4932.1
TCGA-21-1082-01A 61 years, male, white, stage:Stage IB, alive, 3644 days 4928.3
TCGA-43-8118-01A 55 years, female, white, stage:Stage IA, dead, 89 days 4921.4
TCGA-43-2578-01A 59 years, female, white, stage:Stage IA, dead, 684 days 4919.5
TCGA-37-3783-01A 51 years, male, white, stage:Stage IIIA, alive, 122 days 4902.2
TCGA-33-A5GW-01A 67 years, male, white, stage:Stage IIA, dead, 9 days 4895.8
TCGA-68-7755-01A 60 years, female, white, stage:Stage IIA, alive, 83 days 4891.4
TCGA-O2-A52Q-01A 44 years, female, white, stage:Stage III, dead, 113 days 4891.3
TCGA-56-7731-01A 66 years, female, white, stage:Stage IB, dead, 3 days 4890.2
TCGA-56-8628-01A 78 years, male, white, stage:Stage IA, alive, 616 days 4889.7
TCGA-63-6202-01A male, stage:Stage IIA, alive, 1602 days 4874.2
TCGA-85-A4QR-01A 67 years, male, white, stage:Stage IB, alive, 600 days 4873.6
TCGA-77-8008-01A 68 years, male, stage:Stage IB, dead, 2639 days 4842.0
TCGA-90-7964-01A 70 years, male, white, stage:Stage IB, alive, 428 days 4817.0
TCGA-77-8009-01A 68 years, male, stage:Stage IIB, dead, 1695 days 4805.2
TCGA-66-2790-01A 72 years, male, stage:Stage IIB, alive, 699 days 4768.5
TCGA-77-8131-01A 72 years, male, stage:Stage IB, dead, 383 days 4762.5
TCGA-60-2722-01A 66 years, male, white, stage:Stage IIB, alive, 908 days 4751.3
TCGA-43-6647-01A 69 years, female, white, stage:Stage IIB, alive, 757 days 4750.6
TCGA-96-A4JK-01A 65 years, male, white, stage:Stage IIA, alive, 589 days 4749.9
TCGA-77-8007-01A 68 years, male, stage:Stage IIB, dead, 198 days 4745.2
TCGA-21-5784-01A 80 years, female, white, stage:Stage IB, alive, 1268 days 4724.0
TCGA-22-4599-01A 73 years, female, white, stage:Stage IB, dead, 1161 days 4696.8
TCGA-58-A46N-01A 52 years, male, white, stage:Stage IB, alive, 910 days 4694.1
TCGA-52-7622-01A 62 years, female, white, stage:Stage IA, alive, 862 days 4677.2
TCGA-56-8625-01A 66 years, female, white, stage:Stage IIIA, dead, 315 days 4666.3
TCGA-85-7699-01A 73 years, male, white, stage:Stage IIIA, dead, 1001 days 4652.7
TCGA-77-A5G3-01A 63 years, male, stage:Stage IIB, alive, 4570 days 4648.7
TCGA-85-7696-01A 64 years, male, white, stage:Stage IA, alive, 1111 days 4641.0
TCGA-56-8626-01A 59 years, male, white, stage:Stage IA, dead, 302 days 4621.7
TCGA-22-5479-01A 64 years, male, white, stage:Stage IB, dead, 2625 days 4609.7
TCGA-77-8143-01A 76 years, male, stage:Stage IIIA, dead, 803 days 4605.2
TCGA-63-A5MJ-01A 54 years, male, stage:Stage IIB, alive, 1824 days 4603.5
TCGA-77-8148-01A 68 years, male, stage:Stage IIIA, alive, 2023 days 4597.0
TCGA-43-2576-01A 62 years, female, white, stage:Stage IIIA, alive, 1223 days 4592.5
TCGA-63-A5MT-01A 74 years, male, stage:Stage IIB, alive, 498 days 4591.9
TCGA-34-8456-01A 71 years, female, white, stage:Stage IIA, alive, 804 days 4590.9
TCGA-85-8072-01A 60 years, male, white, stage:Stage IA, alive, 932 days 4590.0
TCGA-NC-A5HI-01A 68 years, female, white, stage:Stage IB, alive, 1743 days 4588.6
TCGA-NC-A5HK-01A 58 years, female, white, stage:Stage IIB, alive, 128 days 4577.1
TCGA-J1-A4AH-01A 70 years, male, white, stage:Stage IIA, alive, 581 days 4561.4
TCGA-22-5471-01A 75 years, male, white, stage:Stage IB, alive, 1845 days 4556.1
TCGA-21-5782-01A 68 years, female, white, stage:Stage IB, dead, 962 days 4549.5
TCGA-33-AASL-01A 57 years, female, black or african american, stage:Stage IA, dead, 826 days 4547.3
TCGA-58-8392-01A 70 years, male, white, stage:Stage IB, dead, 501 days 4519.5
TCGA-18-3419-01A 73 years, male, stage:Stage IIB, alive, 2811 days 4518.2
TCGA-39-5027-01A 73 years, male, white, stage:Stage IB, alive, 3108 days 4510.6
TCGA-60-2706-01A 58 years, male, white, stage:Stage IA, alive, 2820 days 4506.1
TCGA-98-8023-01A 70 years, male, white, stage:Stage IIIA, alive, 649 days 4503.2
TCGA-98-A53B-01A 69 years, male, white, stage:Stage IB, dead, 61 days 4499.0
TCGA-NC-A5HN-01A 77 years, male, white, stage:Stage IIA, alive, 1499 days 4455.4
TCGA-22-A5C4-01A 70 years, male, white, stage:Stage IIA, alive, 671 days 4453.5
TCGA-43-5668-01A 78 years, male, white, stage:Stage IIA, dead, 559 days 4445.8
TCGA-43-5670-01A 70 years, male, white, stage:Stage IIA, alive, 849 days 4445.5
TCGA-52-7809-01A 74 years, male, white, stage:Stage IB, dead, 166 days 4439.2
TCGA-22-4609-01A 81 years, male, white, stage:Stage IA, dead, 291 days 4428.2
TCGA-33-AASJ-01A 60 years, male, black or african american, stage:Stage IB, dead, 3600 days 4417.0
TCGA-56-8305-01A 72 years, male, white, stage:Stage IB, alive, 105 days 4414.0
TCGA-33-4587-01A 63 years, female, white, stage:Stage IB, dead, 1656 days 4405.3
TCGA-85-8582-01A 49 years, male, white, stage:Stage IA, alive, 1160 days 4400.4
TCGA-22-5485-01A 58 years, female, white, stage:Stage IA, dead, 916 days 4373.2
TCGA-77-7141-01A 64 years, male, white, stage:Stage IB, alive, 15 days 4364.5
TCGA-98-8021-01A 75 years, female, white, stage:Stage IA, alive, 937 days 4339.5
TCGA-33-4589-01A 62 years, female, white, stage:Stage IIB, dead, 47 days 4314.6
TCGA-58-A46J-01A 64 years, male, white, stage:Stage IIB, alive, 2589 days 4297.1
TCGA-77-A5G1-01A 75 years, male, stage:Stage IIIA, alive, 4026 days 4293.6
TCGA-56-8504-01A 74 years, male, white, stage:Stage IB, alive, 510 days 4266.5
TCGA-NC-A5HP-01A 69 years, male, white, stage:Stage IV, dead, 770 days 4248.1
TCGA-21-5783-01A 76 years, male, white, stage:Stage IB, dead, 2680 days 4247.5
TCGA-98-A53A-01A 70 years, male, black or african american, stage:Stage IB, dead, 552 days 4224.1
TCGA-22-4605-01A 78 years, female, stage:Stage IB, dead, 974 days 4222.2
TCGA-21-1079-01A 71 years, male, white, stage:Stage IIIA, dead, 965 days 4215.4
TCGA-77-7337-01A 65 years, male, white, stage:Stage IIB, dead, 3253 days 4215.0
TCGA-39-5022-01A 76 years, male, white, stage:Stage IB, dead, 1679 days 4211.8
TCGA-NK-A7XE-01A 66 years, male, black or african american, stage:Stage IIIB, alive, 13 days 4190.7
TCGA-63-A5MN-01A 78 years, female, stage:Stage IIB, dead, 345 days 4184.3
TCGA-66-2783-01A 67 years, male, stage:Stage IIIB, alive, 759 days 4154.3
TCGA-37-A5EM-01A 49 years, male, white, stage:Stage II, alive, 867 days 4150.0
TCGA-21-A5DI-01A 77 years, male, white, stage:Stage IA, alive, 979 days 4148.0
TCGA-92-8065-01A 74 years, female, white, stage:Stage IIB, alive, 70 days 4138.8
TCGA-96-8170-01A 75 years, female, white, stage:Stage IIA, alive, 531 days 4132.0
TCGA-63-A5MP-01A 56 years, male, stage:Stage IIB, alive, 769 days 4126.2
TCGA-58-8391-01A 57 years, female, white, stage:Stage IIIA, alive, 2167 days 4109.6
TCGA-77-8156-01A 60 years, male, stage:Stage IB, alive, 1106 days 4109.4
TCGA-56-A62T-01A 78 years, male, black or african american, stage:Stage IIA, alive, 440 days 4098.2
TCGA-43-7658-01A 75 years, female, white, stage:Stage IA, dead, 2378 days 4093.5
TCGA-NK-A5CR-01A 77 years, male, stage:Stage IB, alive, 2542 days 4086.1
TCGA-94-A5I6-01A 62 years, male, white, stage:Stage IIB, alive, 538 days 4066.6
TCGA-39-5040-01A 59 years, male, white, stage:Stage IIIA, dead, 519 days 4055.0
TCGA-39-5021-01A 70 years, male, white, stage:Stage IB, dead, 2086 days 4043.0
TCGA-85-A511-01A 62 years, male, white, stage:Stage IIB, dead, 455 days 4037.5
TCGA-96-8169-01A 67 years, female, white, stage:Stage IA, alive, 557 days 4022.2
TCGA-85-8584-01A 71 years, male, white, stage:Stage IIA, dead, 383 days 4020.0
TCGA-60-2726-01A 56 years, male, white, stage:Stage IIA, dead, 358 days 4006.1
TCGA-O2-A52W-01A 63 years, male, black or african american, stage:Stage I, dead, 261 days 4004.0
TCGA-77-8145-01A 73 years, male, stage:Stage IIIB, dead, 212 days 3992.6
TCGA-56-8309-01A 66 years, male, white, stage:Stage IA, alive, 428 days 3988.2
TCGA-22-5492-01A 73 years, female, stage:Stage IIIA, dead, 506 days 3979.0
TCGA-34-A5IX-01A 80 years, male, white, stage:Stage IIB, alive, 1031 days 3976.7
TCGA-94-A4VJ-01A 71 years, female, white, stage:Stage IA, alive, 430 days 3974.8
TCGA-63-7020-01A male, stage:Stage IA, alive, 2133 days 3971.5
TCGA-56-8304-01A 73 years, female, white, stage:Stage IA, alive, 106 days 3960.4
TCGA-85-A4JB-01A 74 years, male, white, stage:Stage IIB, alive, 942 days 3958.5
TCGA-56-5897-01A 74 years, male, white, stage:Stage IA, alive, 378 days 3956.5
TCGA-85-8481-01A 70 years, male, white, stage:Stage IIB, dead, 236 days 3916.5
TCGA-56-A4ZK-01A 76 years, female, white, stage:Stage IB, alive, 570 days 3903.2
TCGA-NK-A5CX-01A 73 years, male, white, stage:Stage IIA, alive, 111 days 3902.0
TCGA-56-A4BY-01A 66 years, male, white, stage:Stage IB, dead, 543 days 3893.2
TCGA-56-A49D-01A 67 years, male, white, stage:Stage IIIA, alive, 637 days 3889.9
TCGA-NC-A5HF-01A 74 years, male, white, stage:Stage IIIB, dead, 138 days 3872.0
TCGA-68-A59J-01A 74 years, female, white, stage:Stage IB, alive, 448 days 3868.8
TCGA-33-6738-01A 80 years, male, white, stage:Stage IIIA, alive, 1927 days 3854.7
TCGA-63-7022-01A female, stage:Stage IA, alive, 2073 days 3844.2
TCGA-43-8115-01A 72 years, female, white, stage:Stage IIA, alive, 407 days 3838.4
TCGA-85-A50M-01A 47 years, male, asian, stage:Stage IIA, dead, 826 days 3826.6
TCGA-85-A510-01A 74 years, female, white, stage:Stage IIB, alive, 482 days 3812.1
TCGA-33-AASB-01A 66 years, male, black or african american, stage:Stage IB, dead, 211 days 3808.1
TCGA-63-7021-01A male, stage:Stage IA, alive, 2142 days 3804.9
TCGA-56-A5DS-01A 72 years, female, white, stage:Stage IB, alive, 8 days 3804.6
TCGA-56-8622-01A 68 years, male, white, stage:Stage IB, alive, 55 days 3780.1
TCGA-77-A5GH-01A 81 years, male, stage:Stage IB, alive, 1182 days 3775.7
TCGA-LA-A7SW-01A 71 years, male, black or african american, stage:Stage IIIA, dead, 408 days 3722.9
TCGA-NC-A5HG-01A 59 years, male, white, stage:Stage IIIA, alive, 1963 days 3718.7
TCGA-22-5478-01A 79 years, male, stage:Stage IB, dead, 24 days 3702.9
TCGA-34-8454-01A 62 years, female, white, stage:Stage IIIA, alive, 1180 days 3685.7
TCGA-NC-A5HT-01A 69 years, male, white, stage:Stage IIIA, alive, 804 days 3676.6
TCGA-63-A5MR-01A 70 years, female, stage:Stage IB, alive, 2716 days 3672.3
TCGA-NC-A5HM-01A 76 years, male, white, stage:Stage IB, alive, 1212 days 3617.7
TCGA-NC-A5HR-01A 75 years, female, white, stage:Stage IIA, alive, 1244 days 3613.0
TCGA-46-6025-01A 71 years, male, white, stage:Stage IIB, alive, 324 days 3606.5
TCGA-77-8139-01A 72 years, male, stage:Stage IIB, alive, 3166 days 3582.0
TCGA-85-A5B5-01A 58 years, male, white, stage:Stage IA, alive, 111 days 3578.0
TCGA-22-4595-01A 57 years, male, white, stage:Stage IIIA, dead, 734 days 3551.1
TCGA-NC-A5HQ-01A 70 years, male, white, stage:Stage IIIA, dead, 448 days 3540.5
TCGA-98-A538-01A 67 years, male, white, stage:Stage IIB, alive, 826 days 3505.7
TCGA-33-AASI-01A 65 years, female, black or african american, stage:Stage IIB, dead, 1344 days 3505.7
TCGA-68-A59I-01A 73 years, female, black or african american, stage:Stage IIIA, alive, 492 days 3468.0
TCGA-85-A4JC-01A 84 years, male, white, stage:Stage IIA, dead, 604 days 3441.8
TCGA-63-A5MV-01A 69 years, male, stage:Stage IIA, alive, 1100 days 3433.5
TCGA-22-1005-01A 63 years, male, white, stage:Stage IA, dead, 1953 days 3417.1
TCGA-77-8136-01A 74 years, female, stage:Stage IIB, dead, 1189 days 3326.7
TCGA-39-5034-01A 73 years, female, white, stage:Stage IIB, dead, 1107 days 3312.1
TCGA-98-A53J-01A 77 years, male, white, stage:Stage IB, alive, 630 days 3298.9
TCGA-85-7844-01A 71 years, male, white, stage:Stage IB, alive, 911 days 3275.8
TCGA-90-6837-01A 64 years, male, white, stage:Stage IIB, alive, 758 days 3199.3
TCGA-56-A4BW-01A 55 years, male, white, stage:Stage IIA, alive, 585 days 3176.5
TCGA-77-8153-01A 77 years, female, stage:Stage IB, alive, 1992 days 3143.5
TCGA-85-8479-01A 66 years, male, white, stage:Stage IA, alive, 468 days 3125.9
TCGA-56-7822-01A 75 years, male, black or african american, stage:Stage IIB, dead, 532 days 3102.1
TCGA-NK-A5CT-01A 70 years, male, white, stage:Stage IA, alive, 1997 days 3076.8
TCGA-37-5819-01A 64 years, male, white, stage:Stage IIIA, alive, 103 days 3016.7
TCGA-XC-AA0X-01A 77 years, female, black or african american, stage:Stage IA, dead, 6 days 3002.5
TCGA-56-A5DR-01A 81 years, male, white, stage:Stage IA, alive, 4 days 2979.1
TCGA-63-A5MS-01A 78 years, male, stage:Stage IB, alive, 2381 days 2976.1
TCGA-43-6773-01A 76 years, male, white, stage:Stage IIB, dead, 116 days 2911.0
TCGA-63-A5MG-01A 68 years, male, stage:Stage IB, alive, 2148 days 2909.3
TCGA-33-AASD-01A 83 years, male, black or african american, stage:Stage IA, dead, 2249 days 2908.6
TCGA-39-5030-01A 81 years, female, asian, stage:Stage IIIA, dead, 59 days 2873.6
TCGA-85-7710-01A 59 years, female, white, stage:Stage IA, alive, 42 days 2868.0
TCGA-22-1011-01A 73 years, male, white, stage:Stage IB, dead, 53 days 2684.0
TCGA-90-7766-01A 66 years, female, white, stage:Stage IA, alive, 289 days 2678.5
TCGA-37-A5EL-01A 53 years, male, white, stage:Stage IIB, dead, 1143 days 2645.2
TCGA-94-7033-01A 73 years, male, white, stage:Stage IB, alive, 640 days 2566.8
TCGA-43-A56U-01A 76 years, female, white, stage:Stage IA, alive, 432 days 2494.0
TCGA-43-A56V-01A 61 years, male, black or african american, stage:Stage IIIA, alive, 366 days 2453.3
TCGA-85-A513-01A 60 years, female, asian, stage:Stage IA, alive, 910 days 2440.4
TCGA-21-1081-01A 69 years, male, white, stage:Stage IIB, dead, 284 days 2059.2
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LUNG SQUAMOUS CELL CARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

EEF1A1 is not prognostic in Lung Squamous Cell Carcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 7650.89
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 8311.7
Number of samples 68
Samples
Sample Description pTPM
L753 61 years, male, stage:Stage IIA, alive, 1705 days 19594.4
L739 49 years, female, stage:Stage IIIA, dead, 352 days 16292.2
L466 65 years, female, stage:Stage IIIA, dead, 412 days 15274.3
L592 61 years, male, stage:Stage IB, alive, 2368 days 12842.8
L650 69 years, female, stage:Stage IB, dead, 986 days 11658.9
L459 75 years, male, stage:Stage IIA, alive, 3181 days 11655.9
L852 64 years, male, stage:Stage IB, dead, 700 days 11124.8
L818 67 years, male, stage:Stage IB, alive, 2480 days 10912.7
L452 62 years, male, stage:Stage IIIA, dead, 3115 days 10766.8
L860 77 years, male, stage:Stage IA, alive, 2056 days 10687.9
L457 46 years, female, stage:Stage IIA, alive, 2901 days 10417.3
L420 57 years, female, stage:Stage IIB, dead, 295 days 10217.9
L820 73 years, female, stage:Stage IA, alive, 2405 days 10168.6
L468 53 years, male, stage:Stage IB, alive, 3004 days 10028.0
L723 67 years, male, stage:Stage IIA, dead, 433 days 10027.9
L744 75 years, male, stage:Stage IA, alive, 1614 days 9966.8
L715 69 years, female, stage:Stage IIIA, dead, 150 days 9946.3
L539 78 years, male, stage:Stage IB, dead, 370 days 9889.1
L604 67 years, male, stage:Stage IIA, dead, 286 days 9704.2
L755 82 years, male, stage:Stage IIA, dead, 227 days 9432.1
L644 67 years, male, stage:Stage IA, dead, 282 days 9413.5
L447 67 years, male, stage:Stage IIB, alive, 3203 days 9272.9
L881 70 years, male, stage:Stage IB, alive, 1752 days 8986.9
L824 70 years, male, stage:Stage IA, dead, 665 days 8778.3
L655 62 years, male, stage:Stage IIA, dead, 1603 days 8679.6
L488 61 years, female, stage:Stage IIA, alive, 2993 days 8609.8
L586 67 years, male, stage:Stage IIA, dead, 784 days 8537.1
L483 65 years, male, stage:Stage IB, dead, 77 days 8238.4
L464 66 years, male, stage:Stage IB, dead, 1935 days 8234.5
L406 64 years, male, stage:Stage IA, alive, 3057 days 8089.6
L472 71 years, male, stage:Stage IB, dead, 423 days 8075.9
L642 67 years, male, stage:Stage IB, dead, 1167 days 7916.1
L685 71 years, female, stage:Stage IIB, alive, 1944 days 7835.2
L652 82 years, male, stage:Stage IA, dead, 5 days 7817.3
L442 75 years, female, stage:Stage IB, dead, 2433 days 7796.7
L736 67 years, male, stage:Stage IA, dead, 1195 days 7650.9
L444 74 years, female, stage:Stage IIB, alive, 3337 days 7610.9
L456 48 years, male, stage:Stage IIA, dead, 1660 days 7574.2
L751 59 years, female, stage:Stage IIIA, alive, 1600 days 7556.5
L559 72 years, male, stage:Stage IIB, alive, 2615 days 7424.4
L767 67 years, male, stage:Stage IA, alive, 1718 days 7308.6
L886 71 years, male, stage:Stage IB, dead, 1932 days 7241.6
L633 77 years, female, stage:Stage IA, alive, 2102 days 7210.8
L854 62 years, female, stage:Stage IB, alive, 2256 days 7184.8
L490 58 years, male, stage:Stage IA, dead, 716 days 7155.9
L563 61 years, female, stage:Stage IIB, dead, 1216 days 7149.0
L470 78 years, female, stage:Stage IB, dead, 1774 days 6979.4
L864 66 years, female, stage:Stage IA, alive, 2192 days 6975.1
L760 80 years, male, stage:Stage IIA, alive, 1895 days 6873.1
L788 54 years, female, stage:Stage IA, alive, 3385 days 6814.7
L658 65 years, female, stage:Stage IIB, alive, 2083 days 6468.1
L661 66 years, male, stage:Stage IA, dead, 1123 days 6407.1
L712 61 years, male, stage:Stage IA, alive, 1698 days 6401.6
L747 74 years, female, stage:Stage IA, dead, 1112 days 6348.6
L856 69 years, male, stage:Stage IA, dead, 1465 days 6261.8
L817 76 years, female, stage:Stage IIIA, dead, 1279 days 6067.0
L568 77 years, female, stage:Stage IIB, dead, 71 days 6028.7
L758 84 years, male, stage:Stage IA, dead, 1562 days 5919.7
L756 72 years, male, stage:Stage IB, alive, 1796 days 5799.5
L534 66 years, male, stage:Stage IIA, alive, 2693 days 5636.9
L529 79 years, female, stage:Stage IA, alive, 2775 days 5596.4
L858 69 years, female, stage:Stage IIB, dead, 558 days 5466.5
L608 73 years, male, stage:Stage IA, alive, 2350 days 5279.7
L884 71 years, male, stage:Stage IIA, alive, 1627 days 5186.4
L719 63 years, male, stage:Stage IB, alive, 1615 days 4718.0
L496 77 years, male, stage:Stage IB, alive, 2761 days 4560.8
L857 69 years, male, stage:Stage IB, dead, 226 days 4385.5
L572 58 years, male, stage:Stage IA, alive, 2532 days 3064.4
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LUNG ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples 213
Samples
Sample ID Sample type nRPX
CPT0105270003 Tumor 0.9
CPT0083780003 Tumor 0.5
CPT0118810003 Tumor 0.5
CPT0106110003 Tumor 0.5
CPT0090860003 Tumor 0.5
CPT0011710004 Tumor 0.5
CPT0118620003 Tumor 0.5
CPT0118340003 Tumor 0.5
CPT0105060003 Tumor 0.5
CPT0105230003 Tumor 0.5
CPT0068800003 Tumor 0.4
CPT0098130003 Tumor 0.4
CPT0067940003 Tumor 0.4
CPT0067250003 Tumor 0.4
CPT0000920017 Tumor 0.4
CPT0092530003 Tumor 0.3
CPT0109740004 Tumor 0.3
CPT0148180004 Tumor 0.3
CPT0070060003 Tumor 0.3
CPT0008450003 Tumor 0.3
CPT0113210003 Tumor 0.3
CPT0090700003 Tumor 0.3
CPT0090170004 Tumor 0.2
CPT0052170004 Tumor 0.2
CPT0052940004 Tumor 0.2
CPT0091860003 Tumor 0.2
CPT0069360003 Tumor 0.2
CPT0001660013 Tumor 0.2
CPT0001960003 Tumor 0.2
CPT0067450003 Tumor 0.2
CPT0105710003 Tumor 0.1
CPT0014860003 Tumor 0.1
CPT0105630003 Tumor 0.1
CPT0021450003 Tumor 0.1
CPT0001380003 Tumor 0.1
CPT0104970003 Tumor 0.1
CPT0023310003 Tumor 0.1
CPT0117970003 Tumor 0.1
CPT0097580003 Tumor 0.1
CPT0014260003 Tumor 0.1
CPT0147380004 Tumor 0.1
CPT0063810003 Tumor 0.1
CPT0102450003 Tumor 0.1
CPT0001580009 Tumor 0.1
CPT0118570003 Tumor 0.1
CPT0051690004 Tumor 0.1
CPT0070080003 Normal 0.1
CPT0147080004 Tumor 0.1
CPT0090340003 Tumor 0.1
CPT0068610003 Tumor 0.1
CPT0067290003 Normal 0.1
CPT0114840003 Tumor 0.1
CPT0118200003 Tumor 0.1
CPT0084140003 Tumor 0.0
CPT0110980004 Tumor 0.0
CPT0090900004 Normal 0.0
CPT0086310003 Tumor 0.0
CPT0011750003 Normal 0.0
CPT0001800013 Tumor 0.0
CPT0112060003 Tumor 0.0
CPT0105600003 Tumor 0.0
CPT0105330003 Tumor 0.0
CPT0069700003 Tumor 0.0
CPT0113990003 Tumor 0.0
CPT0110860004 Tumor 0.0
CPT0105940003 Tumor 0.0
CPT0063730003 Tumor 0.0
CPT0001590003 Normal 0.0
CPT0067620003 Tumor 0.0
CPT0105370004 Normal 0.0
CPT0091260003 Normal 0.0
CPT0066810003 Normal 0.0
CPT0001070003 Normal 0.0
CPT0067070003 Tumor 0.0
CPT0105190003 Normal 0.0
CPT0015410003 Tumor 0.0
CPT0082740004 Tumor 0.0
CPT0118160003 Tumor 0.0
CPT0086750003 Tumor 0.0
CPT0090200003 Normal 0.0
CPT0090720003 Normal 0.0
CPT0066890003 Tumor -0.1
CPT0105250003 Normal -0.1
CPT0053040004 Tumor -0.1
CPT0104630003 Tumor -0.1
CPT0146980004 Tumor -0.1
CPT0091240003 Tumor -0.1
CPT0083810003 Normal -0.1
CPT0105510003 Tumor -0.1
CPT0092250003 Normal -0.1
CPT0148280004 Tumor -0.1
CPT0068100003 Tumor -0.1
CPT0069520003 Tumor -0.1
CPT0104750003 Tumor -0.1
CPT0083140003 Normal -0.1
CPT0001970003 Normal -0.1
CPT0147980004 Tumor -0.1
CPT0109760003 Normal -0.1
CPT0146780004 Tumor -0.1
CPT0013880003 Tumor -0.1
CPT0067950003 Normal -0.1
CPT0092930003 Tumor -0.1
CPT0118360003 Normal -0.1
CPT0105010004 Normal -0.1
CPT0104760003 Normal -0.1
CPT0092240003 Tumor -0.1
CPT0011910004 Tumor -0.1
CPT0114660004 Tumor -0.1
CPT0147580004 Tumor -0.1
CPT0105980003 Normal -0.1
CPT0148000003 Normal -0.1
CPT0086320003 Normal -0.1
CPT0115070003 Tumor -0.1
CPT0090570004 Tumor -0.1
CPT0125810003 Tumor -0.1
CPT0105550003 Normal -0.1
CPT0091870003 Normal -0.1
CPT0083100003 Tumor -0.1
CPT0067770003 Normal -0.1
CPT0082890003 Normal -0.1
CPT0068830003 Normal -0.1
CPT0105680003 Normal -0.1
CPT0118240003 Normal -0.1
CPT0097600003 Normal -0.1
CPT0086770003 Normal -0.2
CPT0063750003 Normal -0.2
CPT0011930003 Normal -0.2
CPT0118880003 Tumor -0.2
CPT0102480003 Normal -0.2
CPT0014930003 Normal -0.2
CPT0113220003 Normal -0.2
CPT0104650003 Normal -0.2
CPT0069720003 Normal -0.2
CPT0067110003 Normal -0.2
CPT0105610003 Normal -0.2
CPT0111590003 Normal -0.2
CPT0118650003 Normal -0.2
CPT0079830003 Tumor -0.2
CPT0112080003 Normal -0.2
CPT0084170003 Normal -0.2
CPT0109850003 Normal -0.2
CPT0082770003 Normal -0.2
CPT0089340003 Tumor -0.2
CPT0110890003 Normal -0.2
CPT0082850004 Tumor -0.2
CPT0147500003 Normal -0.2
CPT0067470004 Normal -0.2
CPT0148200003 Normal -0.2
CPT0014290003 Normal -0.2
CPT0118010003 Normal -0.2
CPT0105740003 Normal -0.2
CPT0013630003 Normal -0.2
CPT0015420003 Normal -0.2
CPT0111300003 Tumor -0.2
CPT0147400003 Normal -0.2
CPT0013910003 Normal -0.2
CPT0118890003 Normal -0.2
CPT0090600003 Normal -0.2
CPT0079850003 Normal -0.2
CPT0146800003 Normal -0.2
CPT0008420003 Normal -0.2
CPT0013600003 Tumor -0.2
CPT0090370003 Normal -0.2
CPT0001690003 Normal -0.2
CPT0021490003 Normal -0.2
CPT0001810003 Normal -0.2
CPT0068130003 Normal -0.2
CPT0114690003 Normal -0.2
CPT0147900003 Normal -0.2
CPT0001390003 Normal -0.2
CPT0147100003 Normal -0.2
CPT0125830003 Normal -0.2
CPT0109700003 Normal -0.2
CPT0148300003 Normal -0.2
CPT0106100003 Normal -0.2
CPT0062810003 Normal -0.2
CPT0066930003 Normal -0.2
CPT0092940003 Normal -0.2
CPT0083420003 Normal -0.2
CPT0069550003 Normal -0.2
CPT0023320003 Normal -0.2
CPT0069370003 Normal -0.2
CPT0118830003 Normal -0.2
CPT0001060010 Tumor -0.2
CPT0008410003 Tumor -0.2
CPT0109710003 Normal -0.3
CPT0115090003 Normal -0.3
CPT0146700003 Normal -0.3
CPT0118600003 Normal -0.3
CPT0000930003 Normal -0.3
CPT0147480004 Tumor -0.3
CPT0063840003 Normal -0.3
CPT0109680004 Tumor -0.3
CPT0114880003 Normal -0.3
CPT0083390004 Tumor -0.3
CPT0089360003 Normal -0.3
CPT0055100004 Tumor -0.3
CPT0109720004 Tumor -0.3
CPT0148100003 Normal -0.3
CPT0147000003 Normal -0.3
CPT0114010003 Normal -0.3
CPT0147600003 Normal -0.3
CPT0068650003 Normal -0.3
CPT0146880004 Tumor -0.3
CPT0111480003 Normal -0.3
CPT0118180003 Normal -0.3
CPT0146680004 Tumor -0.3
CPT0066780003 Tumor -0.3
CPT0109830004 Tumor -0.3
CPT0146600003 Normal -0.4
CPT0147880004 Tumor -0.5
CPT0146580004 Tumor N/A
CPT0148080004 Tumor N/A
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples 212
Samples
Sample ID Sample type nRPX
CPT0083980003 Tumor 1.0
CPT0204990003 Tumor 0.8
CPT0146380004 Tumor 0.8
CPT0208770003 Tumor 0.7
CPT0104360003 Tumor 0.7
CPT0112720003 Tumor 0.6
CPT0115830003 Tumor 0.5
CPT0202020008 Tumor 0.5
CPT0175410003 Normal 0.5
CPT0209490003 Tumor 0.4
CPT0175390003 Tumor 0.4
CPT0197090003 Tumor 0.4
CPT0063480003 Tumor 0.4
CPT0068280003 Tumor 0.4
CPT0197740003 Tumor 0.4
CPT0079050003 Tumor 0.4
CPT0205000003 Normal 0.4
CPT0238110004 Tumor 0.4
CPT0126670003 Tumor 0.4
CPT0237760003 Tumor 0.4
CPT0086260003 Tumor 0.4
CPT0117720003 Tumor 0.4
CPT0104930003 Tumor 0.4
CPT0091050003 Tumor 0.4
CPT0130030003 Tumor 0.4
CPT0126830003 Normal 0.4
CPT0197210003 Tumor 0.4
CPT0221200003 Tumor 0.3
CPT0234790003 Tumor 0.3
CPT0091820003 Tumor 0.3
CPT0245830003 Tumor 0.3
CPT0236420003 Tumor 0.3
CPT0234930004 Tumor 0.3
CPT0123370003 Normal 0.3
CPT0227400003 Tumor 0.3
CPT0175560003 Tumor 0.3
CPT0202530004 Tumor 0.3
CPT0023470003 Tumor 0.3
CPT0237060004 Tumor 0.2
CPT0237200004 Tumor 0.2
CPT0112730003 Normal 0.2
CPT0079100003 Tumor 0.2
CPT0010050003 Tumor 0.2
CPT0186130003 Tumor 0.2
CPT0126740003 Tumor 0.2
CPT0147680004 Tumor 0.2
CPT0183250004 Tumor 0.2
CPT0123350003 Tumor 0.2
CPT0175260003 Tumor 0.2
CPT0126810003 Tumor 0.2
CPT0190550003 Tumor 0.1
CPT0191860003 Tumor 0.1
CPT0202720003 Tumor 0.1
CPT0105420003 Tumor 0.1
CPT0237690004 Tumor 0.1
CPT0202350004 Tumor 0.1
CPT0218280003 Tumor 0.1
CPT0197150003 Tumor 0.1
CPT0108560003 Tumor 0.1
CPT0112540003 Tumor 0.1
CPT0245780003 Tumor 0.1
CPT0237780003 Normal 0.1
CPT0202170003 Tumor 0.1
CPT0146480004 Tumor 0.1
CPT0204600003 Tumor 0.1
CPT0007740003 Tumor 0.1
CPT0217420003 Tumor 0.1
CPT0223820003 Normal 0.1
CPT0063430003 Tumor 0.1
CPT0195510003 Tumor 0.1
CPT0204800003 Tumor 0.1
CPT0207210003 Tumor 0.1
CPT0136640003 Tumor 0.1
CPT0175120003 Tumor 0.1
CPT0126530003 Tumor 0.1
CPT0187370003 Tumor 0.1
CPT0089880003 Tumor 0.1
CPT0102790003 Tumor 0.1
CPT0126390003 Tumor 0.1
CPT0192540004 Tumor 0.1
CPT0232670003 Tumor 0.1
CPT0191710003 Tumor 0.0
CPT0112650003 Tumor 0.0
CPT0233120003 Tumor 0.0
CPT0175270003 Normal 0.0
CPT0064040003 Tumor 0.0
CPT0010060003 Normal 0.0
CPT0130270003 Tumor 0.0
CPT0237550004 Tumor 0.0
CPT0130440004 Normal 0.0
CPT0196810003 Tumor 0.0
CPT0245880003 Tumor 0.0
CPT0098770003 Tumor 0.0
CPT0069890003 Tumor 0.0
CPT0126450003 Tumor 0.0
CPT0091620003 Normal 0.0
CPT0098800003 Normal 0.0
CPT0186180003 Tumor 0.0
CPT0233320003 Tumor 0.0
CPT0227020003 Tumor -0.1
CPT0197380003 Normal -0.1
CPT0191930003 Normal -0.1
CPT0090440003 Tumor -0.1
CPT0112600003 Normal -0.1
CPT0237410004 Tumor -0.1
CPT0112580003 Tumor -0.1
CPT0225380003 Tumor -0.1
CPT0111150004 Tumor -0.1
CPT0136660003 Normal -0.1
CPT0087190003 Tumor -0.1
CPT0130410003 Tumor -0.1
CPT0223790003 Tumor -0.1
CPT0219360003 Tumor -0.1
CPT0023500003 Normal -0.1
CPT0108600003 Normal -0.1
CPT0209020004 Tumor -0.1
CPT0192590004 Normal -0.1
CPT0221220003 Normal -0.1
CPT0234560003 Tumor -0.1
CPT0237970004 Tumor -0.1
CPT0111000004 Normal -0.1
CPT0221650003 Tumor -0.1
CPT0202740003 Normal -0.1
CPT0068320003 Normal -0.1
CPT0147700003 Normal -0.1
CPT0197860003 Normal -0.1
CPT0202040003 Normal -0.1
CPT0146400003 Normal -0.1
CPT0091610003 Tumor -0.1
CPT0001020003 Tumor -0.1
CPT0233330003 Normal -0.1
CPT0128890003 Tumor -0.1
CPT0233600003 Tumor -0.1
CPT0197480003 Tumor -0.1
CPT0186210003 Normal -0.2
CPT0086270003 Normal -0.2
CPT0202400004 Normal -0.2
CPT0126470003 Normal -0.2
CPT0241170003 Tumor -0.2
CPT0204820003 Normal -0.2
CPT0083990003 Normal -0.2
CPT0104950003 Normal -0.2
CPT0069900003 Normal -0.2
CPT0202220004 Normal -0.2
CPT0101130003 Tumor -0.2
CPT0104380003 Normal -0.2
CPT0195520003 Normal -0.2
CPT0237210003 Normal -0.2
CPT0234580003 Normal -0.2
CPT0079110003 Normal -0.2
CPT0237570003 Normal -0.2
CPT0102840003 Normal -0.2
CPT0245790003 Normal -0.2
CPT0202580004 Normal -0.2
CPT0087210003 Normal -0.2
CPT0175160003 Normal -0.2
CPT0105430003 Normal -0.2
CPT0225470003 Normal -0.2
CPT0117770003 Normal -0.2
CPT0227420003 Normal -0.2
CPT0115860003 Normal -0.2
CPT0245890003 Normal -0.2
CPT0222740003 Normal -0.2
CPT0147180004 Tumor -0.2
CPT0130070003 Normal -0.3
CPT0130310003 Normal -0.3
CPT0183270003 Normal -0.3
CPT0208780003 Normal -0.3
CPT0007760003 Normal -0.3
CPT0241210003 Normal -0.3
CPT0227070003 Normal -0.3
CPT0197170003 Normal -0.3
CPT0186140003 Normal -0.3
CPT0187380003 Normal -0.3
CPT0079060003 Normal -0.3
CPT0209040003 Normal -0.3
CPT0219390003 Normal -0.3
CPT0237710003 Normal -0.3
CPT0233160003 Normal -0.3
CPT0112660003 Normal -0.3
CPT0222730003 Tumor -0.3
CPT0236430003 Normal -0.3
CPT0218310003 Normal -0.3
CPT0197520003 Normal -0.3
CPT0146500003 Normal -0.3
CPT0197100003 Normal -0.3
CPT0112550003 Normal -0.3
CPT0207250003 Normal -0.3
CPT0234950004 Normal -0.3
CPT0063440003 Normal -0.3
CPT0221660003 Normal -0.3
CPT0063500003 Normal -0.3
CPT0234820003 Normal -0.3
CPT0091090003 Normal -0.3
CPT0217490003 Normal -0.3
CPT0232690003 Normal -0.3
CPT0126400003 Normal -0.3
CPT0064050003 Normal -0.3
CPT0245840003 Normal -0.3
CPT0196820003 Normal -0.3
CPT0238130003 Normal -0.4
CPT0128900003 Normal -0.4
CPT0209510003 Normal -0.4
CPT0237430003 Normal -0.4
CPT0237080003 Normal -0.4
CPT0001030003 Normal -0.4
CPT0147200003 Normal -0.4
CPT0126760003 Normal -0.4
CPT0204660003 Normal -0.4
CPT0233640003 Normal -0.4
CPT0237990003 Normal -0.4
CPT0191750003 Normal -0.5
Show allShow less
LUNG CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.


Antibody HPA051759

Antibody HPA056990
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Adenocarcinoma, NOS
Squamous cell carcinoma, NOS

Contact

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