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NODAL
HPA
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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • NODAL
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

NODAL
Synonyms
Gene descriptioni

Full gene name according to HGNC.

Nodal growth differentiation factor
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Secreted, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 10
Cytoband q22.1
Chromosome location (bp) 70431936 - 70447951
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

2
Ensembl ENSG00000156574 (version 109)
Entrez gene 4838
HGNC HGNC:7865
UniProt Q96S42 (UniProt - Evidence at protein level)
neXtProt NX_Q96S42
GeneCards NODAL
Antibodypedia NODAL antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Essential for mesoderm formation and axial patterning during embryonic development.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Cytokine, Developmental protein, Growth factor
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a secreted ligand of the TGF-beta (transforming growth factor-beta) superfamily of proteins. Ligands of this family bind various TGF-beta receptors leading to recruitment and activation of SMAD family transcription factors that regulate gene expression. The encoded preproprotein is proteolytically processed to generate the mature protein, which regulates early embryonic development. This protein is required for maintenance of human embryonic stem cell pluripotency and may play a role in human placental development. Mutations in this gene are associated with heterotaxy, a condition characterized by random orientation of visceral organs with respect to the left-right axis. [provided by RefSeq, Aug 2016]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
NODAL-201
ENSP00000287139
ENST00000287139
Q96S42
[Direct mapping] Nodal homolog
Show all
   THUMBUP predicted membrane proteins
Predicted secreted proteins
   Secreted proteins predicted by MDSEC
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Disease related genes
Human disease related genes
   Congenital malformations
   Other congenital malformations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0000122 [negative regulation of transcription by RNA polymerase II]
GO:0001701 [in utero embryonic development]
GO:0001702 [gastrulation with mouth forming second]
GO:0001707 [mesoderm formation]
GO:0001829 [trophectodermal cell differentiation]
GO:0001831 [trophectodermal cellular morphogenesis]
GO:0001842 [neural fold formation]
GO:0001889 [liver development]
GO:0001890 [placenta development]
GO:0001892 [embryonic placenta development]
GO:0001893 [maternal placenta development]
GO:0001944 [vasculature development]
GO:0001947 [heart looping]
GO:0002085 [inhibition of neuroepithelial cell differentiation]
GO:0005125 [cytokine activity]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0007281 [germ cell development]
GO:0007368 [determination of left/right symmetry]
GO:0007369 [gastrulation]
GO:0007399 [nervous system development]
GO:0007420 [brain development]
GO:0007492 [endoderm development]
GO:0007507 [heart development]
GO:0007565 [female pregnancy]
GO:0008083 [growth factor activity]
GO:0008283 [cell population proliferation]
GO:0008284 [positive regulation of cell population proliferation]
GO:0009880 [embryonic pattern specification]
GO:0009948 [anterior/posterior axis specification]
GO:0009952 [anterior/posterior pattern specification]
GO:0009966 [regulation of signal transduction]
GO:0010085 [polarity specification of proximal/distal axis]
GO:0010470 [regulation of gastrulation]
GO:0010575 [positive regulation of vascular endothelial growth factor production]
GO:0010721 [negative regulation of cell development]
GO:0010862 [positive regulation of pathway-restricted SMAD protein phosphorylation]
GO:0016015 []
GO:0016477 [cell migration]
GO:0019827 [stem cell population maintenance]
GO:0022409 [positive regulation of cell-cell adhesion]
GO:0030154 [cell differentiation]
GO:0030324 [lung development]
GO:0030509 [BMP signaling pathway]
GO:0032927 [positive regulation of activin receptor signaling pathway]
GO:0033505 [floor plate morphogenesis]
GO:0035019 [somatic stem cell population maintenance]
GO:0035050 [embryonic heart tube development]
GO:0035987 [endodermal cell differentiation]
GO:0038092 [nodal signaling pathway]
GO:0042074 [cell migration involved in gastrulation]
GO:0043280 [positive regulation of cysteine-type endopeptidase activity involved in apoptotic process]
GO:0045165 [cell fate commitment]
GO:0045596 [negative regulation of cell differentiation]
GO:0045766 [positive regulation of angiogenesis]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0048018 [receptor ligand activity]
GO:0048327 [axial mesodermal cell fate specification]
GO:0048382 [mesendoderm development]
GO:0048546 [digestive tract morphogenesis]
GO:0048646 [anatomical structure formation involved in morphogenesis]
GO:0048701 [embryonic cranial skeleton morphogenesis]
GO:0048729 [tissue morphogenesis]
GO:0048859 [formation of anatomical boundary]
GO:0050679 [positive regulation of epithelial cell proliferation]
GO:0051091 [positive regulation of DNA-binding transcription factor activity]
GO:0055123 [digestive system development]
GO:0060136 [embryonic process involved in female pregnancy]
GO:0060137 [maternal process involved in parturition]
GO:0060391 [positive regulation of SMAD protein signal transduction]
GO:0060395 [SMAD protein signal transduction]
GO:0060460 [left lung morphogenesis]
GO:0060766 [negative regulation of androgen receptor signaling pathway]
GO:0060802 [epiblast cell-extraembryonic ectoderm cell signaling involved in anterior/posterior axis specification]
GO:0070374 [positive regulation of ERK1 and ERK2 cascade]
GO:0070698 [type I activin receptor binding]
GO:0090009 [primitive streak formation]
GO:0090010 [transforming growth factor beta receptor signaling pathway involved in primitive streak formation]
GO:1900164 [nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry]
GO:1900224 [positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry]
GO:1901164 [negative regulation of trophoblast cell migration]
GO:1901383 [negative regulation of chorionic trophoblast cell proliferation]
GO:2000036 [regulation of stem cell population maintenance]
GO:2000242 [negative regulation of reproductive process]
Show all
347 aa
39.6 kDa
Yes 0
NODAL-202
ENSP00000394468
ENST00000414871
H7C0E4
[Direct mapping] Nodal homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Other congenital malformations
Show all
GO:0005576 [extracellular region]
GO:0007165 [signal transduction]
GO:0008083 [growth factor activity]
Show all
292 aa
33.5 kDa
No 0

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