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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:186.6 nTPM
HPA Brain:239.4 nTPM
GTEx:186.6 nTPM
FANTOM5:536.4 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

239.4
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 169.9
1981 Female, age 72, midline 209.3
2565 Male, age 75, midline 172.0
2048 Male, age 55, midline 166.0
2194 Female, age 79, both hemispheres 165.2
2816 Male, age 47, midline 137.0
Cervical spinal cord, dorsal horn
nTPM: 239.4
2069 Male, age 47, both hemispheres 316.0
2296 Male, age 66, both hemispheres 269.3
2173 Female, age 72, unknown 254.0
2297 Male, age 75, both hemispheres 224.6
1877 Male, age 55, unknown 215.8
2721 Male, age 90, both hemispheres 156.5
Cervical spinal cord, ventral horn
nTPM: 205.5
2480 Male, age 75, both hemispheres 267.7
2809 Male, age 90, both hemispheres 224.8
2068 Male, age 55, unknown 217.1
2098 Female, age 72, unknown 213.9
2295 Male, age 66, both hemispheres 177.3
2820 Female, age 79, both hemispheres 132.1

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

186.6
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 186.6
Samples: 159

Max nTPM: 517.3
Min nTPM: 57.2
Std nTPM: 61.9
Median nTPM: 176.8
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 517.3
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 392.6
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 352.8
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 347.7
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 331.8
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 306.2
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 301.5
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 289.3
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 287.8
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 284.3
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 281.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 273.9
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 270.9
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 267.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 262.7
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 260.2
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 258.9
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 255.4
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 251.9
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 251.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 250.9
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 247.4
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 247.2
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 246.8
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 244.9
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 244.0
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 242.5
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 241.6
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 240.8
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 234.8
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 233.7
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 233.5
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 232.2
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 227.6
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 224.5
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 224.0
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 223.2
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 223.2
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 220.8
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 219.9
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 219.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 214.1
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 212.7
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 210.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 208.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 206.6
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 204.2
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 203.2
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 201.9
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 200.2
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 200.2
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 199.6
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 199.4
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 198.6
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 198.0
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 197.5
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 195.5
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 195.3
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 193.6
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 193.0
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 193.0
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 187.6
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 187.1
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 186.1
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 185.4
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 184.2
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 183.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 183.9
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 183.1
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 182.4
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 182.3
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 182.2
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 182.1
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 182.0
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 180.6
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 180.4
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 179.4
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 178.2
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 177.3
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 176.8
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 175.7
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 175.5
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 174.0
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 171.9
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 170.7
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 170.4
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 169.2
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 168.6
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 168.2
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 168.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 167.6
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 167.1
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 166.9
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 166.6
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 165.1
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 164.8
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 164.6
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 164.1
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 164.1
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 163.7
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 163.4
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 161.5
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 160.4
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 160.2
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 159.6
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 158.3
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 157.8
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 157.6
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 156.2
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 155.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 154.2
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 154.1
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 153.9
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 151.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 149.7
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 149.1
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 147.6
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 146.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 146.1
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 145.2
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 144.8
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 142.8
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 142.4
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 141.3
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 140.6
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 140.1
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 139.5
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 138.8
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 138.2
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 136.6
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 136.3
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 135.7
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 135.6
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 134.6
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 134.4
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 132.3
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 132.3
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 131.3
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 129.7
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 127.1
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 125.9
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 124.8
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 124.4
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 123.1
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 122.3
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 121.6
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 121.3
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 118.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 116.8
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 111.5
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 108.6
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 105.9
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 103.2
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 100.5
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 97.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 82.4
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 74.6
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 73.9
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 57.2
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

536.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 536.4
FF:10181-103D1 60 years, female 581.7
FF:10159-103A6 76 years, female 491.1

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